Development and Interlaboratory Validation of a Simple Screening Method for Genetically Modified Maize Using a ΔΔC(q)-Based Multiplex Real-Time PCR Assay

A number of genetically modified (GM) maize events have been developed and approved worldwide for commercial cultivation. A screening method is needed to monitor GM maize approved for commercialization in countries that mandate the labeling of foods containing a specified threshold level of GM crops...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Analytical chemistry (Washington) 2016-04, Vol.88 (8), p.4285-4293
Hauptverfasser: Noguchi, Akio, Nakamura, Kosuke, Sakata, Kozue, Sato-Fukuda, Nozomi, Ishigaki, Takumi, Mano, Junichi, Takabatake, Reona, Kitta, Kazumi, Teshima, Reiko, Kondo, Kazunari, Nishimaki-Mogami, Tomoko
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 4293
container_issue 8
container_start_page 4285
container_title Analytical chemistry (Washington)
container_volume 88
creator Noguchi, Akio
Nakamura, Kosuke
Sakata, Kozue
Sato-Fukuda, Nozomi
Ishigaki, Takumi
Mano, Junichi
Takabatake, Reona
Kitta, Kazumi
Teshima, Reiko
Kondo, Kazunari
Nishimaki-Mogami, Tomoko
description A number of genetically modified (GM) maize events have been developed and approved worldwide for commercial cultivation. A screening method is needed to monitor GM maize approved for commercialization in countries that mandate the labeling of foods containing a specified threshold level of GM crops. In Japan, a screening method has been implemented to monitor approved GM maize since 2001. However, the screening method currently used in Japan is time-consuming and requires generation of a calibration curve and experimental conversion factor (C(f)) value. We developed a simple screening method that avoids the need for a calibration curve and C(f) value. In this method, ΔC(q) values between the target sequences and the endogenous gene are calculated using multiplex real-time PCR, and the ΔΔC(q) value between the analytical and control samples is used as the criterion for determining analytical samples in which the GM organism content is below the threshold level for labeling of GM crops. An interlaboratory study indicated that the method is applicable independently with at least two models of PCR instruments used in this study.
doi_str_mv 10.1021/acs.analchem.5b04335
format Article
fullrecord <record><control><sourceid>proquest_pubme</sourceid><recordid>TN_cdi_proquest_miscellaneous_1782834236</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>1782834236</sourcerecordid><originalsourceid>FETCH-LOGICAL-p563-7d754acec95a56026afd743255fac3541f0fbd67626e7549f1fffe4ac5df64533</originalsourceid><addsrcrecordid>eNo1kM1OGzEUhS2kCijwBqi6S7qY1D9jz7CkaUmRiEAQ2EY34-vGlccexhNEeI7seKc8U4NKV2dxvvMtDmOngo8El-IbNnmEEUOzpHakF7xUSu-xQ6ElL0xdywP2Oec_nAvBhdlnB7Ligle1OmRvP-iZQupaigNgtHAVB-oDLlKPQ-rX8IjBWxx8ipAcINz7tgsE901PFH38DVMalsmCSz1MKNLgGwxhDdNkvfNkYYr-leAhv7MI2812Mz57-lp8x_xersLgd74XuCMMxcy3BLfjO7jIGdfH7JPDkOnkI4_Y7PLnbPyruL6ZXI0vrotOG1VUttIlNtSca9SGS4POVqWSWjtslC6F425hTWWkoR157oRzjnYLbZ0ptVJH7OyftuvT04ryMG99bigEjJRWeS6qWtaqlMrs0C8f6GrRkp13vW-xX8___6n-Al3veyE</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1782834236</pqid></control><display><type>article</type><title>Development and Interlaboratory Validation of a Simple Screening Method for Genetically Modified Maize Using a ΔΔC(q)-Based Multiplex Real-Time PCR Assay</title><source>ACS Publications</source><source>MEDLINE</source><creator>Noguchi, Akio ; Nakamura, Kosuke ; Sakata, Kozue ; Sato-Fukuda, Nozomi ; Ishigaki, Takumi ; Mano, Junichi ; Takabatake, Reona ; Kitta, Kazumi ; Teshima, Reiko ; Kondo, Kazunari ; Nishimaki-Mogami, Tomoko</creator><creatorcontrib>Noguchi, Akio ; Nakamura, Kosuke ; Sakata, Kozue ; Sato-Fukuda, Nozomi ; Ishigaki, Takumi ; Mano, Junichi ; Takabatake, Reona ; Kitta, Kazumi ; Teshima, Reiko ; Kondo, Kazunari ; Nishimaki-Mogami, Tomoko</creatorcontrib><description>A number of genetically modified (GM) maize events have been developed and approved worldwide for commercial cultivation. A screening method is needed to monitor GM maize approved for commercialization in countries that mandate the labeling of foods containing a specified threshold level of GM crops. In Japan, a screening method has been implemented to monitor approved GM maize since 2001. However, the screening method currently used in Japan is time-consuming and requires generation of a calibration curve and experimental conversion factor (C(f)) value. We developed a simple screening method that avoids the need for a calibration curve and C(f) value. In this method, ΔC(q) values between the target sequences and the endogenous gene are calculated using multiplex real-time PCR, and the ΔΔC(q) value between the analytical and control samples is used as the criterion for determining analytical samples in which the GM organism content is below the threshold level for labeling of GM crops. An interlaboratory study indicated that the method is applicable independently with at least two models of PCR instruments used in this study.</description><identifier>EISSN: 1520-6882</identifier><identifier>DOI: 10.1021/acs.analchem.5b04335</identifier><identifier>PMID: 27010783</identifier><language>eng</language><publisher>United States</publisher><subject>Calibration ; DNA, Plant - analysis ; DNA, Plant - genetics ; Food, Genetically Modified ; Japan ; Plants, Genetically Modified - genetics ; Real-Time Polymerase Chain Reaction - methods ; Zea mays - genetics</subject><ispartof>Analytical chemistry (Washington), 2016-04, Vol.88 (8), p.4285-4293</ispartof><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27901,27902</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/27010783$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Noguchi, Akio</creatorcontrib><creatorcontrib>Nakamura, Kosuke</creatorcontrib><creatorcontrib>Sakata, Kozue</creatorcontrib><creatorcontrib>Sato-Fukuda, Nozomi</creatorcontrib><creatorcontrib>Ishigaki, Takumi</creatorcontrib><creatorcontrib>Mano, Junichi</creatorcontrib><creatorcontrib>Takabatake, Reona</creatorcontrib><creatorcontrib>Kitta, Kazumi</creatorcontrib><creatorcontrib>Teshima, Reiko</creatorcontrib><creatorcontrib>Kondo, Kazunari</creatorcontrib><creatorcontrib>Nishimaki-Mogami, Tomoko</creatorcontrib><title>Development and Interlaboratory Validation of a Simple Screening Method for Genetically Modified Maize Using a ΔΔC(q)-Based Multiplex Real-Time PCR Assay</title><title>Analytical chemistry (Washington)</title><addtitle>Anal Chem</addtitle><description>A number of genetically modified (GM) maize events have been developed and approved worldwide for commercial cultivation. A screening method is needed to monitor GM maize approved for commercialization in countries that mandate the labeling of foods containing a specified threshold level of GM crops. In Japan, a screening method has been implemented to monitor approved GM maize since 2001. However, the screening method currently used in Japan is time-consuming and requires generation of a calibration curve and experimental conversion factor (C(f)) value. We developed a simple screening method that avoids the need for a calibration curve and C(f) value. In this method, ΔC(q) values between the target sequences and the endogenous gene are calculated using multiplex real-time PCR, and the ΔΔC(q) value between the analytical and control samples is used as the criterion for determining analytical samples in which the GM organism content is below the threshold level for labeling of GM crops. An interlaboratory study indicated that the method is applicable independently with at least two models of PCR instruments used in this study.</description><subject>Calibration</subject><subject>DNA, Plant - analysis</subject><subject>DNA, Plant - genetics</subject><subject>Food, Genetically Modified</subject><subject>Japan</subject><subject>Plants, Genetically Modified - genetics</subject><subject>Real-Time Polymerase Chain Reaction - methods</subject><subject>Zea mays - genetics</subject><issn>1520-6882</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNo1kM1OGzEUhS2kCijwBqi6S7qY1D9jz7CkaUmRiEAQ2EY34-vGlccexhNEeI7seKc8U4NKV2dxvvMtDmOngo8El-IbNnmEEUOzpHakF7xUSu-xQ6ElL0xdywP2Oec_nAvBhdlnB7Ligle1OmRvP-iZQupaigNgtHAVB-oDLlKPQ-rX8IjBWxx8ipAcINz7tgsE901PFH38DVMalsmCSz1MKNLgGwxhDdNkvfNkYYr-leAhv7MI2812Mz57-lp8x_xersLgd74XuCMMxcy3BLfjO7jIGdfH7JPDkOnkI4_Y7PLnbPyruL6ZXI0vrotOG1VUttIlNtSca9SGS4POVqWSWjtslC6F425hTWWkoR157oRzjnYLbZ0ptVJH7OyftuvT04ryMG99bigEjJRWeS6qWtaqlMrs0C8f6GrRkp13vW-xX8___6n-Al3veyE</recordid><startdate>20160419</startdate><enddate>20160419</enddate><creator>Noguchi, Akio</creator><creator>Nakamura, Kosuke</creator><creator>Sakata, Kozue</creator><creator>Sato-Fukuda, Nozomi</creator><creator>Ishigaki, Takumi</creator><creator>Mano, Junichi</creator><creator>Takabatake, Reona</creator><creator>Kitta, Kazumi</creator><creator>Teshima, Reiko</creator><creator>Kondo, Kazunari</creator><creator>Nishimaki-Mogami, Tomoko</creator><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>7X8</scope></search><sort><creationdate>20160419</creationdate><title>Development and Interlaboratory Validation of a Simple Screening Method for Genetically Modified Maize Using a ΔΔC(q)-Based Multiplex Real-Time PCR Assay</title><author>Noguchi, Akio ; Nakamura, Kosuke ; Sakata, Kozue ; Sato-Fukuda, Nozomi ; Ishigaki, Takumi ; Mano, Junichi ; Takabatake, Reona ; Kitta, Kazumi ; Teshima, Reiko ; Kondo, Kazunari ; Nishimaki-Mogami, Tomoko</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-p563-7d754acec95a56026afd743255fac3541f0fbd67626e7549f1fffe4ac5df64533</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Calibration</topic><topic>DNA, Plant - analysis</topic><topic>DNA, Plant - genetics</topic><topic>Food, Genetically Modified</topic><topic>Japan</topic><topic>Plants, Genetically Modified - genetics</topic><topic>Real-Time Polymerase Chain Reaction - methods</topic><topic>Zea mays - genetics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Noguchi, Akio</creatorcontrib><creatorcontrib>Nakamura, Kosuke</creatorcontrib><creatorcontrib>Sakata, Kozue</creatorcontrib><creatorcontrib>Sato-Fukuda, Nozomi</creatorcontrib><creatorcontrib>Ishigaki, Takumi</creatorcontrib><creatorcontrib>Mano, Junichi</creatorcontrib><creatorcontrib>Takabatake, Reona</creatorcontrib><creatorcontrib>Kitta, Kazumi</creatorcontrib><creatorcontrib>Teshima, Reiko</creatorcontrib><creatorcontrib>Kondo, Kazunari</creatorcontrib><creatorcontrib>Nishimaki-Mogami, Tomoko</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>MEDLINE - Academic</collection><jtitle>Analytical chemistry (Washington)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Noguchi, Akio</au><au>Nakamura, Kosuke</au><au>Sakata, Kozue</au><au>Sato-Fukuda, Nozomi</au><au>Ishigaki, Takumi</au><au>Mano, Junichi</au><au>Takabatake, Reona</au><au>Kitta, Kazumi</au><au>Teshima, Reiko</au><au>Kondo, Kazunari</au><au>Nishimaki-Mogami, Tomoko</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Development and Interlaboratory Validation of a Simple Screening Method for Genetically Modified Maize Using a ΔΔC(q)-Based Multiplex Real-Time PCR Assay</atitle><jtitle>Analytical chemistry (Washington)</jtitle><addtitle>Anal Chem</addtitle><date>2016-04-19</date><risdate>2016</risdate><volume>88</volume><issue>8</issue><spage>4285</spage><epage>4293</epage><pages>4285-4293</pages><eissn>1520-6882</eissn><abstract>A number of genetically modified (GM) maize events have been developed and approved worldwide for commercial cultivation. A screening method is needed to monitor GM maize approved for commercialization in countries that mandate the labeling of foods containing a specified threshold level of GM crops. In Japan, a screening method has been implemented to monitor approved GM maize since 2001. However, the screening method currently used in Japan is time-consuming and requires generation of a calibration curve and experimental conversion factor (C(f)) value. We developed a simple screening method that avoids the need for a calibration curve and C(f) value. In this method, ΔC(q) values between the target sequences and the endogenous gene are calculated using multiplex real-time PCR, and the ΔΔC(q) value between the analytical and control samples is used as the criterion for determining analytical samples in which the GM organism content is below the threshold level for labeling of GM crops. An interlaboratory study indicated that the method is applicable independently with at least two models of PCR instruments used in this study.</abstract><cop>United States</cop><pmid>27010783</pmid><doi>10.1021/acs.analchem.5b04335</doi><tpages>9</tpages></addata></record>
fulltext fulltext
identifier EISSN: 1520-6882
ispartof Analytical chemistry (Washington), 2016-04, Vol.88 (8), p.4285-4293
issn 1520-6882
language eng
recordid cdi_proquest_miscellaneous_1782834236
source ACS Publications; MEDLINE
subjects Calibration
DNA, Plant - analysis
DNA, Plant - genetics
Food, Genetically Modified
Japan
Plants, Genetically Modified - genetics
Real-Time Polymerase Chain Reaction - methods
Zea mays - genetics
title Development and Interlaboratory Validation of a Simple Screening Method for Genetically Modified Maize Using a ΔΔC(q)-Based Multiplex Real-Time PCR Assay
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-02-02T02%3A45%3A32IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_pubme&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Development%20and%20Interlaboratory%20Validation%20of%20a%20Simple%20Screening%20Method%20for%20Genetically%20Modified%20Maize%20Using%20a%20%CE%94%CE%94C(q)-Based%20Multiplex%20Real-Time%20PCR%20Assay&rft.jtitle=Analytical%20chemistry%20(Washington)&rft.au=Noguchi,%20Akio&rft.date=2016-04-19&rft.volume=88&rft.issue=8&rft.spage=4285&rft.epage=4293&rft.pages=4285-4293&rft.eissn=1520-6882&rft_id=info:doi/10.1021/acs.analchem.5b04335&rft_dat=%3Cproquest_pubme%3E1782834236%3C/proquest_pubme%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=1782834236&rft_id=info:pmid/27010783&rfr_iscdi=true