Assessment of functional diversity and structure of phytate-hydrolysing bacterial community in Lolium perenne rhizosphere

BACKGROUND AND AIMS: Plant growth is frequently limited by the availability of inorganic phosphorus (P) in the soil. In most soils, a considerable amount of the soil P is bound to organic molecules. Of these, phytate is the most abundant identifiable organic P form, but is not readily available to p...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Plant and soil 2016-04, Vol.401 (1-2), p.151-167
Hauptverfasser: Sanguin, Hervé, Wilson, Neil L, Kertesz, Michael A
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 167
container_issue 1-2
container_start_page 151
container_title Plant and soil
container_volume 401
creator Sanguin, Hervé
Wilson, Neil L
Kertesz, Michael A
description BACKGROUND AND AIMS: Plant growth is frequently limited by the availability of inorganic phosphorus (P) in the soil. In most soils, a considerable amount of the soil P is bound to organic molecules. Of these, phytate is the most abundant identifiable organic P form, but is not readily available to plants. In contrast, microorganisms have been shown to degrade phytate with high efficiency. The current study aims to characterize the members of the phytate-hydrolysing bacterial community in rhizosphere, and the molecular and enzymatic ability of these bacteria to degrade phytate. METHODS AND RESULTS: The phytate-hydrolysing bacterial community was characterized from the rhizosphere of plants cultivated in the presence or absence of phytate supplementation. Major changes in the bacterial community structure were observed with both culture-dependent and -independent methods, which highlighted the predominance of Proteobacteria and Actinobacteria. Phytase activity was detected for a range of rhizobacterial isolates as well as the presence of, β-propeller phytases (BPP) for both isolates and directly in a soil sample. CONCLUSION: A wide taxonomic range of functional phytate utilizers have been discovered, in soil bacterial taxa that were previously not well known for their ability to utilise phytate as P or C sources. This study provides new insights into microbial carbon and phosphorus cycling in soil.
doi_str_mv 10.1007/s11104-015-2512-7
format Article
fullrecord <record><control><sourceid>gale_proqu</sourceid><recordid>TN_cdi_proquest_miscellaneous_1780519116</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><galeid>A446755825</galeid><jstor_id>26180711</jstor_id><sourcerecordid>A446755825</sourcerecordid><originalsourceid>FETCH-LOGICAL-c570t-8db51d7bfa516cdcf09004764abcfe2c2ca1f395cde327fb2c273cdff62d658f3</originalsourceid><addsrcrecordid>eNp9kU2r1DAUhosoOF79AS7Eghs3vZ6TNkm7HC7XDxhwoRfchTRNZjK0SU1Sof56UyoiLiSLcM55niTkLYqXCLcIwN9FRISmAqQVoUgq_qg4IOV1RaFmj4sDQE0q4N23p8WzGK-w1cgOxXqMUcc4aZdKb0qzOJWsd3IsB_tDh2jTWko3lDGFRaUl6I2aL2uSSVeXdQh-XKN157KXKulgs6j8NC1uE60rT360y1TOOmjndBku9qeP8yWXz4snRo5Rv_i93xQP7--_3n2sTp8_fLo7nipFOaSqHXqKA--NpMjUoAx0AA1njeyV0UQRJdHUHVWDrgk3fe7wWg3GMDIw2pr6pni7nzsH_33RMYnJRqXHUTrtlyiQt0CxQ2QZffMPevVLyJ-xUbxBThtGMnW7U2c5amGd8SlIldegJ6u808bm_rFpGKe0JTQLuAsq-BiDNmIOdpJhFQhiS0_s6YmcntjSEzw7ZHdiZt1Zh7-e8h_p1S5dY_Lhzy2EYQscMc9f73MjvZDnYKN4-EIAGQCSuoOm_gUvqLLS</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1774175462</pqid></control><display><type>article</type><title>Assessment of functional diversity and structure of phytate-hydrolysing bacterial community in Lolium perenne rhizosphere</title><source>JSTOR Archive Collection A-Z Listing</source><source>SpringerLink Journals - AutoHoldings</source><creator>Sanguin, Hervé ; Wilson, Neil L ; Kertesz, Michael A</creator><creatorcontrib>Sanguin, Hervé ; Wilson, Neil L ; Kertesz, Michael A</creatorcontrib><description>BACKGROUND AND AIMS: Plant growth is frequently limited by the availability of inorganic phosphorus (P) in the soil. In most soils, a considerable amount of the soil P is bound to organic molecules. Of these, phytate is the most abundant identifiable organic P form, but is not readily available to plants. In contrast, microorganisms have been shown to degrade phytate with high efficiency. The current study aims to characterize the members of the phytate-hydrolysing bacterial community in rhizosphere, and the molecular and enzymatic ability of these bacteria to degrade phytate. METHODS AND RESULTS: The phytate-hydrolysing bacterial community was characterized from the rhizosphere of plants cultivated in the presence or absence of phytate supplementation. Major changes in the bacterial community structure were observed with both culture-dependent and -independent methods, which highlighted the predominance of Proteobacteria and Actinobacteria. Phytase activity was detected for a range of rhizobacterial isolates as well as the presence of, β-propeller phytases (BPP) for both isolates and directly in a soil sample. CONCLUSION: A wide taxonomic range of functional phytate utilizers have been discovered, in soil bacterial taxa that were previously not well known for their ability to utilise phytate as P or C sources. This study provides new insights into microbial carbon and phosphorus cycling in soil.</description><identifier>ISSN: 0032-079X</identifier><identifier>EISSN: 1573-5036</identifier><identifier>DOI: 10.1007/s11104-015-2512-7</identifier><language>eng</language><publisher>Cham: Springer International Publishing</publisher><subject>Acid soils ; Actinobacteria ; Agricultural soils ; Agrology ; Bacteria ; bacterial communities ; Biomedical and Life Sciences ; carbon ; Community structure ; Ecology ; functional diversity ; Health aspects ; Host-bacteria relationships ; inorganic phosphorus ; Life Sciences ; Lolium perenne ; Microorganisms ; Observations ; Organic soils ; Phosphates ; Phosphorus ; phytases ; phytic acid ; Plant growth ; Plant Physiology ; Plant Sciences ; Plant-soil relationships ; Polymerase chain reaction ; Proteobacteria ; Regular Article ; Rhizosphere ; Rhizosphere bacteria ; soil ; Soil bacteria ; Soil fertility ; Soil microorganisms ; Soil phosphorus ; Soil Science &amp; Conservation ; Soils</subject><ispartof>Plant and soil, 2016-04, Vol.401 (1-2), p.151-167</ispartof><rights>Springer Science+Business Media 2016</rights><rights>Springer International Publishing Switzerland 2015</rights><rights>COPYRIGHT 2016 Springer</rights><rights>Springer International Publishing Switzerland 2016</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c570t-8db51d7bfa516cdcf09004764abcfe2c2ca1f395cde327fb2c273cdff62d658f3</citedby><cites>FETCH-LOGICAL-c570t-8db51d7bfa516cdcf09004764abcfe2c2ca1f395cde327fb2c273cdff62d658f3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/26180711$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/26180711$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>314,780,784,803,27923,27924,41487,42556,51318,58016,58249</link.rule.ids></links><search><creatorcontrib>Sanguin, Hervé</creatorcontrib><creatorcontrib>Wilson, Neil L</creatorcontrib><creatorcontrib>Kertesz, Michael A</creatorcontrib><title>Assessment of functional diversity and structure of phytate-hydrolysing bacterial community in Lolium perenne rhizosphere</title><title>Plant and soil</title><addtitle>Plant Soil</addtitle><description>BACKGROUND AND AIMS: Plant growth is frequently limited by the availability of inorganic phosphorus (P) in the soil. In most soils, a considerable amount of the soil P is bound to organic molecules. Of these, phytate is the most abundant identifiable organic P form, but is not readily available to plants. In contrast, microorganisms have been shown to degrade phytate with high efficiency. The current study aims to characterize the members of the phytate-hydrolysing bacterial community in rhizosphere, and the molecular and enzymatic ability of these bacteria to degrade phytate. METHODS AND RESULTS: The phytate-hydrolysing bacterial community was characterized from the rhizosphere of plants cultivated in the presence or absence of phytate supplementation. Major changes in the bacterial community structure were observed with both culture-dependent and -independent methods, which highlighted the predominance of Proteobacteria and Actinobacteria. Phytase activity was detected for a range of rhizobacterial isolates as well as the presence of, β-propeller phytases (BPP) for both isolates and directly in a soil sample. CONCLUSION: A wide taxonomic range of functional phytate utilizers have been discovered, in soil bacterial taxa that were previously not well known for their ability to utilise phytate as P or C sources. This study provides new insights into microbial carbon and phosphorus cycling in soil.</description><subject>Acid soils</subject><subject>Actinobacteria</subject><subject>Agricultural soils</subject><subject>Agrology</subject><subject>Bacteria</subject><subject>bacterial communities</subject><subject>Biomedical and Life Sciences</subject><subject>carbon</subject><subject>Community structure</subject><subject>Ecology</subject><subject>functional diversity</subject><subject>Health aspects</subject><subject>Host-bacteria relationships</subject><subject>inorganic phosphorus</subject><subject>Life Sciences</subject><subject>Lolium perenne</subject><subject>Microorganisms</subject><subject>Observations</subject><subject>Organic soils</subject><subject>Phosphates</subject><subject>Phosphorus</subject><subject>phytases</subject><subject>phytic acid</subject><subject>Plant growth</subject><subject>Plant Physiology</subject><subject>Plant Sciences</subject><subject>Plant-soil relationships</subject><subject>Polymerase chain reaction</subject><subject>Proteobacteria</subject><subject>Regular Article</subject><subject>Rhizosphere</subject><subject>Rhizosphere bacteria</subject><subject>soil</subject><subject>Soil bacteria</subject><subject>Soil fertility</subject><subject>Soil microorganisms</subject><subject>Soil phosphorus</subject><subject>Soil Science &amp; Conservation</subject><subject>Soils</subject><issn>0032-079X</issn><issn>1573-5036</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNp9kU2r1DAUhosoOF79AS7Eghs3vZ6TNkm7HC7XDxhwoRfchTRNZjK0SU1Sof56UyoiLiSLcM55niTkLYqXCLcIwN9FRISmAqQVoUgq_qg4IOV1RaFmj4sDQE0q4N23p8WzGK-w1cgOxXqMUcc4aZdKb0qzOJWsd3IsB_tDh2jTWko3lDGFRaUl6I2aL2uSSVeXdQh-XKN157KXKulgs6j8NC1uE60rT360y1TOOmjndBku9qeP8yWXz4snRo5Rv_i93xQP7--_3n2sTp8_fLo7nipFOaSqHXqKA--NpMjUoAx0AA1njeyV0UQRJdHUHVWDrgk3fe7wWg3GMDIw2pr6pni7nzsH_33RMYnJRqXHUTrtlyiQt0CxQ2QZffMPevVLyJ-xUbxBThtGMnW7U2c5amGd8SlIldegJ6u808bm_rFpGKe0JTQLuAsq-BiDNmIOdpJhFQhiS0_s6YmcntjSEzw7ZHdiZt1Zh7-e8h_p1S5dY_Lhzy2EYQscMc9f73MjvZDnYKN4-EIAGQCSuoOm_gUvqLLS</recordid><startdate>20160401</startdate><enddate>20160401</enddate><creator>Sanguin, Hervé</creator><creator>Wilson, Neil L</creator><creator>Kertesz, Michael A</creator><general>Springer International Publishing</general><general>Springer</general><general>Springer Nature B.V</general><scope>FBQ</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7SN</scope><scope>7ST</scope><scope>7T7</scope><scope>7X2</scope><scope>88A</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>LK8</scope><scope>M0K</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>RC3</scope><scope>SOI</scope></search><sort><creationdate>20160401</creationdate><title>Assessment of functional diversity and structure of phytate-hydrolysing bacterial community in Lolium perenne rhizosphere</title><author>Sanguin, Hervé ; Wilson, Neil L ; Kertesz, Michael A</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c570t-8db51d7bfa516cdcf09004764abcfe2c2ca1f395cde327fb2c273cdff62d658f3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Acid soils</topic><topic>Actinobacteria</topic><topic>Agricultural soils</topic><topic>Agrology</topic><topic>Bacteria</topic><topic>bacterial communities</topic><topic>Biomedical and Life Sciences</topic><topic>carbon</topic><topic>Community structure</topic><topic>Ecology</topic><topic>functional diversity</topic><topic>Health aspects</topic><topic>Host-bacteria relationships</topic><topic>inorganic phosphorus</topic><topic>Life Sciences</topic><topic>Lolium perenne</topic><topic>Microorganisms</topic><topic>Observations</topic><topic>Organic soils</topic><topic>Phosphates</topic><topic>Phosphorus</topic><topic>phytases</topic><topic>phytic acid</topic><topic>Plant growth</topic><topic>Plant Physiology</topic><topic>Plant Sciences</topic><topic>Plant-soil relationships</topic><topic>Polymerase chain reaction</topic><topic>Proteobacteria</topic><topic>Regular Article</topic><topic>Rhizosphere</topic><topic>Rhizosphere bacteria</topic><topic>soil</topic><topic>Soil bacteria</topic><topic>Soil fertility</topic><topic>Soil microorganisms</topic><topic>Soil phosphorus</topic><topic>Soil Science &amp; Conservation</topic><topic>Soils</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Sanguin, Hervé</creatorcontrib><creatorcontrib>Wilson, Neil L</creatorcontrib><creatorcontrib>Kertesz, Michael A</creatorcontrib><collection>AGRIS</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Ecology Abstracts</collection><collection>Environment Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Agricultural Science Collection</collection><collection>Biology Database (Alumni Edition)</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>Agricultural &amp; Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Biological Science Collection</collection><collection>Agricultural Science Database</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>Genetics Abstracts</collection><collection>Environment Abstracts</collection><jtitle>Plant and soil</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Sanguin, Hervé</au><au>Wilson, Neil L</au><au>Kertesz, Michael A</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Assessment of functional diversity and structure of phytate-hydrolysing bacterial community in Lolium perenne rhizosphere</atitle><jtitle>Plant and soil</jtitle><stitle>Plant Soil</stitle><date>2016-04-01</date><risdate>2016</risdate><volume>401</volume><issue>1-2</issue><spage>151</spage><epage>167</epage><pages>151-167</pages><issn>0032-079X</issn><eissn>1573-5036</eissn><abstract>BACKGROUND AND AIMS: Plant growth is frequently limited by the availability of inorganic phosphorus (P) in the soil. In most soils, a considerable amount of the soil P is bound to organic molecules. Of these, phytate is the most abundant identifiable organic P form, but is not readily available to plants. In contrast, microorganisms have been shown to degrade phytate with high efficiency. The current study aims to characterize the members of the phytate-hydrolysing bacterial community in rhizosphere, and the molecular and enzymatic ability of these bacteria to degrade phytate. METHODS AND RESULTS: The phytate-hydrolysing bacterial community was characterized from the rhizosphere of plants cultivated in the presence or absence of phytate supplementation. Major changes in the bacterial community structure were observed with both culture-dependent and -independent methods, which highlighted the predominance of Proteobacteria and Actinobacteria. Phytase activity was detected for a range of rhizobacterial isolates as well as the presence of, β-propeller phytases (BPP) for both isolates and directly in a soil sample. CONCLUSION: A wide taxonomic range of functional phytate utilizers have been discovered, in soil bacterial taxa that were previously not well known for their ability to utilise phytate as P or C sources. This study provides new insights into microbial carbon and phosphorus cycling in soil.</abstract><cop>Cham</cop><pub>Springer International Publishing</pub><doi>10.1007/s11104-015-2512-7</doi><tpages>17</tpages></addata></record>
fulltext fulltext
identifier ISSN: 0032-079X
ispartof Plant and soil, 2016-04, Vol.401 (1-2), p.151-167
issn 0032-079X
1573-5036
language eng
recordid cdi_proquest_miscellaneous_1780519116
source JSTOR Archive Collection A-Z Listing; SpringerLink Journals - AutoHoldings
subjects Acid soils
Actinobacteria
Agricultural soils
Agrology
Bacteria
bacterial communities
Biomedical and Life Sciences
carbon
Community structure
Ecology
functional diversity
Health aspects
Host-bacteria relationships
inorganic phosphorus
Life Sciences
Lolium perenne
Microorganisms
Observations
Organic soils
Phosphates
Phosphorus
phytases
phytic acid
Plant growth
Plant Physiology
Plant Sciences
Plant-soil relationships
Polymerase chain reaction
Proteobacteria
Regular Article
Rhizosphere
Rhizosphere bacteria
soil
Soil bacteria
Soil fertility
Soil microorganisms
Soil phosphorus
Soil Science & Conservation
Soils
title Assessment of functional diversity and structure of phytate-hydrolysing bacterial community in Lolium perenne rhizosphere
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-12T20%3A17%3A09IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-gale_proqu&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Assessment%20of%20functional%20diversity%20and%20structure%20of%20phytate-hydrolysing%20bacterial%20community%20in%20Lolium%20perenne%20rhizosphere&rft.jtitle=Plant%20and%20soil&rft.au=Sanguin,%20Herv%C3%A9&rft.date=2016-04-01&rft.volume=401&rft.issue=1-2&rft.spage=151&rft.epage=167&rft.pages=151-167&rft.issn=0032-079X&rft.eissn=1573-5036&rft_id=info:doi/10.1007/s11104-015-2512-7&rft_dat=%3Cgale_proqu%3EA446755825%3C/gale_proqu%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=1774175462&rft_id=info:pmid/&rft_galeid=A446755825&rft_jstor_id=26180711&rfr_iscdi=true