Genetic Relatedness of Salmonella Serovars Isolated from Catfish (Clarias gariepinus) and Tilapia (Tilapia mossambica) Obtained from Wet Markets and Ponds in Penang, Malaysia
A total of 43 Salmonella enterica isolates belonging to different serovars (Salmonella Albany, Salmonella Agona, Salmonella Corvallis, Salmonella Stanley, Salmonella Typhimurium, Salmonella Mikawasima, and Salmonella Bovismorbificans) were isolated from catfish (Clarias gariepinus) and tilapia (Tila...
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| Veröffentlicht in: | Journal of food protection 2016-04, Vol.79 (4), p.659-665 |
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| creator | Budiati, Titik Rusul, Gulam Wan-Abdullah, Wan Nadiah Chuah, Li-Oon Ahmad, Rosma Thong, Kwai Lin |
| description | A total of 43 Salmonella enterica isolates belonging to different serovars (Salmonella Albany, Salmonella Agona, Salmonella Corvallis, Salmonella Stanley, Salmonella Typhimurium, Salmonella Mikawasima, and Salmonella Bovismorbificans) were isolated from catfish (Clarias gariepinus) and tilapia (Tilapia mossambica) obtained from nine wet markets and eight ponds in Penang, Malaysia. Thirteen, 19, and 11 isolates were isolated from 9 of 32 catfish, 14 of 32 tilapia, and 11 of 44 water samples, respectively. Fish reared in ponds were fed chicken offal, spoiled eggs, and commercial fish feed. The genetic relatedness of these Salmonella isolates was determined by random amplified polymorphic DNA PCR (RAPD-PCR) using primer OPC2, repetitive extragenic palindromic PCR (REP-PCR), and pulsed-field gel electrophoresis (PFGE). Composite analysis of the RAPD-PCR, REP-PCR, and PFGE results showed that the Salmonella serovars could be differentiated into six clusters and 15 singletons. RAPD-PCR differentiated the Salmonella isolates into 11 clusters and 10 singletons, while REP-PCR differentiated them into 4 clusters and 1 singleton. PFGE differentiated the Salmonella isolates into seven clusters and seven singletons. The close genetic relationship of Salmonella isolates from catfish or tilapia obtained from different ponds, irrespective of the type of feed given, may be caused by several factors, such as the quality of the water, density of fish, and size of ponds. |
| doi_str_mv | 10.4315/0362-028X.JFP-15-372 |
| format | Article |
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Thirteen, 19, and 11 isolates were isolated from 9 of 32 catfish, 14 of 32 tilapia, and 11 of 44 water samples, respectively. Fish reared in ponds were fed chicken offal, spoiled eggs, and commercial fish feed. The genetic relatedness of these Salmonella isolates was determined by random amplified polymorphic DNA PCR (RAPD-PCR) using primer OPC2, repetitive extragenic palindromic PCR (REP-PCR), and pulsed-field gel electrophoresis (PFGE). Composite analysis of the RAPD-PCR, REP-PCR, and PFGE results showed that the Salmonella serovars could be differentiated into six clusters and 15 singletons. RAPD-PCR differentiated the Salmonella isolates into 11 clusters and 10 singletons, while REP-PCR differentiated them into 4 clusters and 1 singleton. PFGE differentiated the Salmonella isolates into seven clusters and seven singletons. The close genetic relationship of Salmonella isolates from catfish or tilapia obtained from different ponds, irrespective of the type of feed given, may be caused by several factors, such as the quality of the water, density of fish, and size of ponds.</description><identifier>ISSN: 0362-028X</identifier><identifier>EISSN: 1944-9097</identifier><identifier>DOI: 10.4315/0362-028X.JFP-15-372</identifier><identifier>PMID: 27052872</identifier><language>eng</language><publisher>United States: Elsevier Limited</publisher><subject>Animals ; Bacteria ; By products ; Catfishes - microbiology ; Deoxyribonucleic acid ; DNA ; DNA polymerase ; DNA Primers - genetics ; Fish ; Fish feeds ; Food safety ; Malaysia ; Pathogens ; Phylogeny ; Polymerase Chain Reaction ; Ponds ; Ponds - microbiology ; Random Amplified Polymorphic DNA Technique ; Reproducibility ; Salmonella ; Salmonella - classification ; Salmonella - genetics ; Salmonella - isolation & purification ; Serogroup ; Studies ; Tilapia ; Tilapia - microbiology ; Water analysis ; Water sampling</subject><ispartof>Journal of food protection, 2016-04, Vol.79 (4), p.659-665</ispartof><rights>Copyright Allen Press Publishing Services Apr 2016</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c381t-cabaaa3b2e92e13d2a87d803a495dcdf1f3556ee379b99b0f2584cb0cc1bd9c23</citedby><cites>FETCH-LOGICAL-c381t-cabaaa3b2e92e13d2a87d803a495dcdf1f3556ee379b99b0f2584cb0cc1bd9c23</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.proquest.com/docview/1786244470?pq-origsite=primo$$EHTML$$P50$$Gproquest$$H</linktohtml><link.rule.ids>314,780,784,27924,27925,64385,64387,64389,72469</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/27052872$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Budiati, Titik</creatorcontrib><creatorcontrib>Rusul, Gulam</creatorcontrib><creatorcontrib>Wan-Abdullah, Wan Nadiah</creatorcontrib><creatorcontrib>Chuah, Li-Oon</creatorcontrib><creatorcontrib>Ahmad, Rosma</creatorcontrib><creatorcontrib>Thong, Kwai Lin</creatorcontrib><title>Genetic Relatedness of Salmonella Serovars Isolated from Catfish (Clarias gariepinus) and Tilapia (Tilapia mossambica) Obtained from Wet Markets and Ponds in Penang, Malaysia</title><title>Journal of food protection</title><addtitle>J Food Prot</addtitle><description>A total of 43 Salmonella enterica isolates belonging to different serovars (Salmonella Albany, Salmonella Agona, Salmonella Corvallis, Salmonella Stanley, Salmonella Typhimurium, Salmonella Mikawasima, and Salmonella Bovismorbificans) were isolated from catfish (Clarias gariepinus) and tilapia (Tilapia mossambica) obtained from nine wet markets and eight ponds in Penang, Malaysia. Thirteen, 19, and 11 isolates were isolated from 9 of 32 catfish, 14 of 32 tilapia, and 11 of 44 water samples, respectively. Fish reared in ponds were fed chicken offal, spoiled eggs, and commercial fish feed. The genetic relatedness of these Salmonella isolates was determined by random amplified polymorphic DNA PCR (RAPD-PCR) using primer OPC2, repetitive extragenic palindromic PCR (REP-PCR), and pulsed-field gel electrophoresis (PFGE). Composite analysis of the RAPD-PCR, REP-PCR, and PFGE results showed that the Salmonella serovars could be differentiated into six clusters and 15 singletons. RAPD-PCR differentiated the Salmonella isolates into 11 clusters and 10 singletons, while REP-PCR differentiated them into 4 clusters and 1 singleton. PFGE differentiated the Salmonella isolates into seven clusters and seven singletons. The close genetic relationship of Salmonella isolates from catfish or tilapia obtained from different ponds, irrespective of the type of feed given, may be caused by several factors, such as the quality of the water, density of fish, and size of ponds.</description><subject>Animals</subject><subject>Bacteria</subject><subject>By products</subject><subject>Catfishes - microbiology</subject><subject>Deoxyribonucleic acid</subject><subject>DNA</subject><subject>DNA polymerase</subject><subject>DNA Primers - genetics</subject><subject>Fish</subject><subject>Fish feeds</subject><subject>Food safety</subject><subject>Malaysia</subject><subject>Pathogens</subject><subject>Phylogeny</subject><subject>Polymerase Chain Reaction</subject><subject>Ponds</subject><subject>Ponds - microbiology</subject><subject>Random Amplified Polymorphic DNA Technique</subject><subject>Reproducibility</subject><subject>Salmonella</subject><subject>Salmonella - classification</subject><subject>Salmonella - genetics</subject><subject>Salmonella - 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Academic</collection><jtitle>Journal of food protection</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Budiati, Titik</au><au>Rusul, Gulam</au><au>Wan-Abdullah, Wan Nadiah</au><au>Chuah, Li-Oon</au><au>Ahmad, Rosma</au><au>Thong, Kwai Lin</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Genetic Relatedness of Salmonella Serovars Isolated from Catfish (Clarias gariepinus) and Tilapia (Tilapia mossambica) Obtained from Wet Markets and Ponds in Penang, Malaysia</atitle><jtitle>Journal of food protection</jtitle><addtitle>J Food Prot</addtitle><date>2016-04</date><risdate>2016</risdate><volume>79</volume><issue>4</issue><spage>659</spage><epage>665</epage><pages>659-665</pages><issn>0362-028X</issn><eissn>1944-9097</eissn><abstract>A total of 43 Salmonella enterica isolates belonging to different serovars (Salmonella Albany, Salmonella Agona, Salmonella Corvallis, Salmonella Stanley, Salmonella Typhimurium, Salmonella Mikawasima, and Salmonella Bovismorbificans) were isolated from catfish (Clarias gariepinus) and tilapia (Tilapia mossambica) obtained from nine wet markets and eight ponds in Penang, Malaysia. Thirteen, 19, and 11 isolates were isolated from 9 of 32 catfish, 14 of 32 tilapia, and 11 of 44 water samples, respectively. Fish reared in ponds were fed chicken offal, spoiled eggs, and commercial fish feed. The genetic relatedness of these Salmonella isolates was determined by random amplified polymorphic DNA PCR (RAPD-PCR) using primer OPC2, repetitive extragenic palindromic PCR (REP-PCR), and pulsed-field gel electrophoresis (PFGE). Composite analysis of the RAPD-PCR, REP-PCR, and PFGE results showed that the Salmonella serovars could be differentiated into six clusters and 15 singletons. RAPD-PCR differentiated the Salmonella isolates into 11 clusters and 10 singletons, while REP-PCR differentiated them into 4 clusters and 1 singleton. PFGE differentiated the Salmonella isolates into seven clusters and seven singletons. The close genetic relationship of Salmonella isolates from catfish or tilapia obtained from different ponds, irrespective of the type of feed given, may be caused by several factors, such as the quality of the water, density of fish, and size of ponds.</abstract><cop>United States</cop><pub>Elsevier Limited</pub><pmid>27052872</pmid><doi>10.4315/0362-028X.JFP-15-372</doi><tpages>7</tpages><oa>free_for_read</oa></addata></record> |
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| ispartof | Journal of food protection, 2016-04, Vol.79 (4), p.659-665 |
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| source | MEDLINE; Elektronische Zeitschriftenbibliothek - Frei zugängliche E-Journals; ProQuest Central UK/Ireland; Alma/SFX Local Collection |
| subjects | Animals Bacteria By products Catfishes - microbiology Deoxyribonucleic acid DNA DNA polymerase DNA Primers - genetics Fish Fish feeds Food safety Malaysia Pathogens Phylogeny Polymerase Chain Reaction Ponds Ponds - microbiology Random Amplified Polymorphic DNA Technique Reproducibility Salmonella Salmonella - classification Salmonella - genetics Salmonella - isolation & purification Serogroup Studies Tilapia Tilapia - microbiology Water analysis Water sampling |
| title | Genetic Relatedness of Salmonella Serovars Isolated from Catfish (Clarias gariepinus) and Tilapia (Tilapia mossambica) Obtained from Wet Markets and Ponds in Penang, Malaysia |
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