Are Prorocentrum hoffmannianum and Prorocentrum belizeanum (DINOPHYCEAE, PROROCENTRALES), the same species? An integration of morphological and molecular data
The taxonomic assignment of Prorocentrum species is based on morphological characteristics; however, morphological variability has been found for several taxa isolated from different geographical regions. In this study, we evaluated species boundaries of Prorocentrum hoffmannianum and Prorocentrum b...
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description | The taxonomic assignment of Prorocentrum species is based on morphological characteristics; however, morphological variability has been found for several taxa isolated from different geographical regions. In this study, we evaluated species boundaries of Prorocentrum hoffmannianum and Prorocentrum belizeanum based on morphological and molecular data. A detailed morphological analysis was done, concentrating on the periflagellar architecture. Molecular analyses were performed on partial Small Sub‐Unit (SSU) rDNA, partial Large Sub‐Unit (LSU) rDNA, complete Internal Transcribed Spacer Regions (ITS1‐5.8S‐ITS2), and partial cytochrome b (cob) sequences. We concatenated the SSU‐ITS‐LSU fragments and constructed a phylogenetic tree using Bayesian Inference (BI) and maximum likelihood (ML) methods. Morphological analyses indicated that the main characters, such as cell size and number of depressions per valve, normally used to distinguish P. hoffmannianum from P. belizeanum, overlapped. No clear differences were found in the periflagellar area architecture. Prorocentrum hoffmannianum and P. belizeanum were a highly supported monophyletic clade separated into three subclades, which broadly corresponded to the sample collection regions. Subtle morphological overlaps found in cell shape, size, and ornamentation lead us to conclude that P. hoffmanianum and P. belizeanum might be considered conspecific. The molecular data analyses did not separate P. hoffmannianum and P. belizeanum into two morphospecies, and thus, we considered them to be the P. hoffmannianum species complex because their clades are separated by their geographic origin. These geographic and genetically distinct clades could be referred to as ribotypes: (A) Belize, (B) Florida‐Cuba, (C1) India, and (C2) Australia. |
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An integration of morphological and molecular data</title><source>Access via Wiley Online Library</source><creator>Herrera‐Sepúlveda, Angélica ; Medlin, Linda K ; Murugan, Gopal ; Sierra‐Beltrán, Arturo P ; Cruz‐Villacorta, Ariel A ; Hernández‐Saavedra, Norma Y ; Müller, K</creator><contributor>Müller, K. ; Müller, K.</contributor><creatorcontrib>Herrera‐Sepúlveda, Angélica ; Medlin, Linda K ; Murugan, Gopal ; Sierra‐Beltrán, Arturo P ; Cruz‐Villacorta, Ariel A ; Hernández‐Saavedra, Norma Y ; Müller, K ; Müller, K. ; Müller, K.</creatorcontrib><description>The taxonomic assignment of Prorocentrum species is based on morphological characteristics; however, morphological variability has been found for several taxa isolated from different geographical regions. In this study, we evaluated species boundaries of Prorocentrum hoffmannianum and Prorocentrum belizeanum based on morphological and molecular data. A detailed morphological analysis was done, concentrating on the periflagellar architecture. Molecular analyses were performed on partial Small Sub‐Unit (SSU) rDNA, partial Large Sub‐Unit (LSU) rDNA, complete Internal Transcribed Spacer Regions (ITS1‐5.8S‐ITS2), and partial cytochrome b (cob) sequences. We concatenated the SSU‐ITS‐LSU fragments and constructed a phylogenetic tree using Bayesian Inference (BI) and maximum likelihood (ML) methods. Morphological analyses indicated that the main characters, such as cell size and number of depressions per valve, normally used to distinguish P. hoffmannianum from P. belizeanum, overlapped. No clear differences were found in the periflagellar area architecture. Prorocentrum hoffmannianum and P. belizeanum were a highly supported monophyletic clade separated into three subclades, which broadly corresponded to the sample collection regions. Subtle morphological overlaps found in cell shape, size, and ornamentation lead us to conclude that P. hoffmanianum and P. belizeanum might be considered conspecific. The molecular data analyses did not separate P. hoffmannianum and P. belizeanum into two morphospecies, and thus, we considered them to be the P. hoffmannianum species complex because their clades are separated by their geographic origin. These geographic and genetically distinct clades could be referred to as ribotypes: (A) Belize, (B) Florida‐Cuba, (C1) India, and (C2) Australia.</description><identifier>ISSN: 0022-3646</identifier><identifier>EISSN: 1529-8817</identifier><identifier>DOI: 10.1111/jpy.12265</identifier><identifier>PMID: 26986267</identifier><language>eng</language><publisher>United States: Phycological Society of America</publisher><subject>Bayesian theory ; cytochrome b ; internal transcribed spacers ; molecular phylogeny ; monophyly ; morphology ; morphospecies ; Prorocentrum ; Prorocentrum hoffmanianum species complex ; provenance ; ribosomal DNA ; ribotypes ; SEM ; taxonomy</subject><ispartof>Journal of phycology, 2015-02, Vol.51 (1), p.173-188</ispartof><rights>2014 Phycological Society of America</rights><rights>2014 Phycological Society of America.</rights><rights>2015 Phycological Society of America</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c5865-d7968b00afcfdf3ae7ae8aeaa6fd2d2d6ea40efeff0f5f0e33c5bebef82e3ce43</citedby><cites>FETCH-LOGICAL-c5865-d7968b00afcfdf3ae7ae8aeaa6fd2d2d6ea40efeff0f5f0e33c5bebef82e3ce43</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1111%2Fjpy.12265$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1111%2Fjpy.12265$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,780,784,1417,27924,27925,45574,45575</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/26986267$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><contributor>Müller, K.</contributor><contributor>Müller, K.</contributor><creatorcontrib>Herrera‐Sepúlveda, Angélica</creatorcontrib><creatorcontrib>Medlin, Linda K</creatorcontrib><creatorcontrib>Murugan, Gopal</creatorcontrib><creatorcontrib>Sierra‐Beltrán, Arturo P</creatorcontrib><creatorcontrib>Cruz‐Villacorta, Ariel A</creatorcontrib><creatorcontrib>Hernández‐Saavedra, Norma Y</creatorcontrib><creatorcontrib>Müller, K</creatorcontrib><title>Are Prorocentrum hoffmannianum and Prorocentrum belizeanum (DINOPHYCEAE, PROROCENTRALES), the same species? An integration of morphological and molecular data</title><title>Journal of phycology</title><addtitle>J. Phycol</addtitle><description>The taxonomic assignment of Prorocentrum species is based on morphological characteristics; however, morphological variability has been found for several taxa isolated from different geographical regions. In this study, we evaluated species boundaries of Prorocentrum hoffmannianum and Prorocentrum belizeanum based on morphological and molecular data. A detailed morphological analysis was done, concentrating on the periflagellar architecture. Molecular analyses were performed on partial Small Sub‐Unit (SSU) rDNA, partial Large Sub‐Unit (LSU) rDNA, complete Internal Transcribed Spacer Regions (ITS1‐5.8S‐ITS2), and partial cytochrome b (cob) sequences. We concatenated the SSU‐ITS‐LSU fragments and constructed a phylogenetic tree using Bayesian Inference (BI) and maximum likelihood (ML) methods. Morphological analyses indicated that the main characters, such as cell size and number of depressions per valve, normally used to distinguish P. hoffmannianum from P. belizeanum, overlapped. No clear differences were found in the periflagellar area architecture. Prorocentrum hoffmannianum and P. belizeanum were a highly supported monophyletic clade separated into three subclades, which broadly corresponded to the sample collection regions. Subtle morphological overlaps found in cell shape, size, and ornamentation lead us to conclude that P. hoffmanianum and P. belizeanum might be considered conspecific. The molecular data analyses did not separate P. hoffmannianum and P. belizeanum into two morphospecies, and thus, we considered them to be the P. hoffmannianum species complex because their clades are separated by their geographic origin. These geographic and genetically distinct clades could be referred to as ribotypes: (A) Belize, (B) Florida‐Cuba, (C1) India, and (C2) Australia.</description><subject>Bayesian theory</subject><subject>cytochrome b</subject><subject>internal transcribed spacers</subject><subject>molecular phylogeny</subject><subject>monophyly</subject><subject>morphology</subject><subject>morphospecies</subject><subject>Prorocentrum</subject><subject>Prorocentrum hoffmanianum species complex</subject><subject>provenance</subject><subject>ribosomal DNA</subject><subject>ribotypes</subject><subject>SEM</subject><subject>taxonomy</subject><issn>0022-3646</issn><issn>1529-8817</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><recordid>eNp1klFv0zAQxyMEYmXsgS8AkXjZpGWz49hJn1BVyjZUtVW2gfZkXZNz65LExU4E5cPwWTHNNgmk2ZKt0_3u79P9HQRvKDmjfp1vtrszGseCPwsGlMfDKMto-jwYEBLHEROJOAheObchhKSC05fBQSyGmYhFOgh-jyyGC2usKbBpbVeHa6NUDU2jofERNOW_6SVW-hfuc8cfr2bzxeXdeDKanIaLfJ7Px5PZTT6aTq5PTsN2jaGD2h9bLDS6D-GoCXXT4spCq00TGhXWxm7XpjIrXUC1f6w2FRZdBTYsoYXXwQsFlcOj-_swuP00uRlfRtP5xdV4NI0KngkelelQZEtCQBWqVAwwBcwAAYQqY78FQkJQoVJEcUWQsYIvcYkqi5EVmLDD4LjX3VrzvUPXylq7AqsKGjSdkzRNEz_YIUs9-v4_dGM62_juJPXTpcOE7amTniqscc6iklura7A7SYn8a5r0psm9aZ59e6_YLWssH8kHlzxw3gM_dIW7p5Xk58Xdg2TUV2jX4s_HCrDfpNdLufw6u5AzxpMveU4l8fy7nldgJKysdvL2OiaU-y9EWMJT9gdCxbto</recordid><startdate>201502</startdate><enddate>201502</enddate><creator>Herrera‐Sepúlveda, Angélica</creator><creator>Medlin, Linda K</creator><creator>Murugan, Gopal</creator><creator>Sierra‐Beltrán, Arturo P</creator><creator>Cruz‐Villacorta, Ariel A</creator><creator>Hernández‐Saavedra, Norma Y</creator><creator>Müller, K</creator><general>Phycological Society of America</general><general>Blackwell Publishing Ltd</general><general>Wiley Subscription Services, Inc</general><scope>FBQ</scope><scope>BSCLL</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7TN</scope><scope>F1W</scope><scope>H95</scope><scope>L.G</scope><scope>M7N</scope><scope>7X8</scope></search><sort><creationdate>201502</creationdate><title>Are Prorocentrum hoffmannianum and Prorocentrum belizeanum (DINOPHYCEAE, PROROCENTRALES), the same species? An integration of morphological and molecular data</title><author>Herrera‐Sepúlveda, Angélica ; Medlin, Linda K ; Murugan, Gopal ; Sierra‐Beltrán, Arturo P ; Cruz‐Villacorta, Ariel A ; Hernández‐Saavedra, Norma Y ; Müller, K</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c5865-d7968b00afcfdf3ae7ae8aeaa6fd2d2d6ea40efeff0f5f0e33c5bebef82e3ce43</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>Bayesian theory</topic><topic>cytochrome b</topic><topic>internal transcribed spacers</topic><topic>molecular phylogeny</topic><topic>monophyly</topic><topic>morphology</topic><topic>morphospecies</topic><topic>Prorocentrum</topic><topic>Prorocentrum hoffmanianum species complex</topic><topic>provenance</topic><topic>ribosomal DNA</topic><topic>ribotypes</topic><topic>SEM</topic><topic>taxonomy</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Herrera‐Sepúlveda, Angélica</creatorcontrib><creatorcontrib>Medlin, Linda K</creatorcontrib><creatorcontrib>Murugan, Gopal</creatorcontrib><creatorcontrib>Sierra‐Beltrán, Arturo P</creatorcontrib><creatorcontrib>Cruz‐Villacorta, Ariel A</creatorcontrib><creatorcontrib>Hernández‐Saavedra, Norma Y</creatorcontrib><creatorcontrib>Müller, K</creatorcontrib><collection>AGRIS</collection><collection>Istex</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Oceanic Abstracts</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of phycology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Herrera‐Sepúlveda, Angélica</au><au>Medlin, Linda K</au><au>Murugan, Gopal</au><au>Sierra‐Beltrán, Arturo P</au><au>Cruz‐Villacorta, Ariel A</au><au>Hernández‐Saavedra, Norma Y</au><au>Müller, K</au><au>Müller, K.</au><au>Müller, K.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Are Prorocentrum hoffmannianum and Prorocentrum belizeanum (DINOPHYCEAE, PROROCENTRALES), the same species? An integration of morphological and molecular data</atitle><jtitle>Journal of phycology</jtitle><addtitle>J. Phycol</addtitle><date>2015-02</date><risdate>2015</risdate><volume>51</volume><issue>1</issue><spage>173</spage><epage>188</epage><pages>173-188</pages><issn>0022-3646</issn><eissn>1529-8817</eissn><abstract>The taxonomic assignment of Prorocentrum species is based on morphological characteristics; however, morphological variability has been found for several taxa isolated from different geographical regions. In this study, we evaluated species boundaries of Prorocentrum hoffmannianum and Prorocentrum belizeanum based on morphological and molecular data. A detailed morphological analysis was done, concentrating on the periflagellar architecture. Molecular analyses were performed on partial Small Sub‐Unit (SSU) rDNA, partial Large Sub‐Unit (LSU) rDNA, complete Internal Transcribed Spacer Regions (ITS1‐5.8S‐ITS2), and partial cytochrome b (cob) sequences. We concatenated the SSU‐ITS‐LSU fragments and constructed a phylogenetic tree using Bayesian Inference (BI) and maximum likelihood (ML) methods. Morphological analyses indicated that the main characters, such as cell size and number of depressions per valve, normally used to distinguish P. hoffmannianum from P. belizeanum, overlapped. No clear differences were found in the periflagellar area architecture. Prorocentrum hoffmannianum and P. belizeanum were a highly supported monophyletic clade separated into three subclades, which broadly corresponded to the sample collection regions. Subtle morphological overlaps found in cell shape, size, and ornamentation lead us to conclude that P. hoffmanianum and P. belizeanum might be considered conspecific. The molecular data analyses did not separate P. hoffmannianum and P. belizeanum into two morphospecies, and thus, we considered them to be the P. hoffmannianum species complex because their clades are separated by their geographic origin. These geographic and genetically distinct clades could be referred to as ribotypes: (A) Belize, (B) Florida‐Cuba, (C1) India, and (C2) Australia.</abstract><cop>United States</cop><pub>Phycological Society of America</pub><pmid>26986267</pmid><doi>10.1111/jpy.12265</doi><tpages>16</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Bayesian theory cytochrome b internal transcribed spacers molecular phylogeny monophyly morphology morphospecies Prorocentrum Prorocentrum hoffmanianum species complex provenance ribosomal DNA ribotypes SEM taxonomy |
title | Are Prorocentrum hoffmannianum and Prorocentrum belizeanum (DINOPHYCEAE, PROROCENTRALES), the same species? An integration of morphological and molecular data |
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