Standardizing the influenza neuraminidase inhibition assay among United States public health laboratories conducting virological surveillance
Monitoring influenza virus susceptibility to neuraminidase (NA) inhibitors (NAIs) is vital for detecting drug-resistant variants, and is primarily assessed using NA inhibition (NI) assays, supplemented by NA sequence analysis. However, differences in NI testing methodologies between surveillance lab...
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creator | Okomo-Adhiambo, M. Mishin, V.P. Sleeman, K. Saguar, E. Guevara, H. Reisdorf, E. Griesser, R.H. Spackman, K.J. Mendenhall, M. Carlos, M.P. Healey, B. St. George, K. Laplante, J. Aden, T. Chester, S. Xu, X. Gubareva, L.V. |
description | Monitoring influenza virus susceptibility to neuraminidase (NA) inhibitors (NAIs) is vital for detecting drug-resistant variants, and is primarily assessed using NA inhibition (NI) assays, supplemented by NA sequence analysis. However, differences in NI testing methodologies between surveillance laboratories results in variability of 50% inhibitory concentration (IC50) values, which impacts data sharing, reporting and interpretation. In 2011, the Centers for Disease Control and Prevention (CDC), in collaboration with the Association for Public Health Laboratories (APHL) spearheaded efforts to standardize fluorescence-based NI assay testing in the United States (U.S.), with the goal of achieving consistency of IC50 data.
For the standardization process, three participating state public health laboratories (PHLs), designated as National Surveillance Reference Centers for Influenza (NSRC-Is), assessed the NAI susceptibility of the 2011–12 CDC reference virus panel using stepwise procedures, with support from the CDC reference laboratory. Next, the NSRC-Is assessed the NAI susceptibility of season 2011–12 U.S. influenza surveillance isolates (n = 940), with a large subset (n = 742) tested in parallel by CDC. Subsequently, U.S. influenza surveillance isolates (n = 9629) circulating during the next three influenza seasons (2012–15), were independently tested by the three NSRC-Is (n = 7331) and CDC (n = 2298).
The NI assay IC50s generated by respective NSRC-Is using viruses and drugs prepared by CDC were similar to those obtained with viruses and drugs prepared in-house, and were uniform between laboratories. IC50s for U.S. surveillance isolates tested during four consecutive influenza seasons (2011–15) were consistent from season to season, within and between laboratories.
These results show that the NI assay is robust enough to be standardized, marking the first time IC50 data have been normalized across multiple laboratories, and used for U.S. national NAI susceptibility surveillance.
•Three U.S. laboratories performed a standardized NI assay initially using reference viruses and drugs prepared by the CDC.•Subsequent preparation of viruses and drugs by each participating laboratory resulted in minimal variation in IC50s.•NI assay standardization was achieved through stepwise uniform procedures with support from the CDC reference laboratory.•WHO-AWVG criteria facilitated reporting of IC50 data generated by other laboratories, in U.S. national surveillance. |
doi_str_mv | 10.1016/j.antiviral.2016.01.009 |
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For the standardization process, three participating state public health laboratories (PHLs), designated as National Surveillance Reference Centers for Influenza (NSRC-Is), assessed the NAI susceptibility of the 2011–12 CDC reference virus panel using stepwise procedures, with support from the CDC reference laboratory. Next, the NSRC-Is assessed the NAI susceptibility of season 2011–12 U.S. influenza surveillance isolates (n = 940), with a large subset (n = 742) tested in parallel by CDC. Subsequently, U.S. influenza surveillance isolates (n = 9629) circulating during the next three influenza seasons (2012–15), were independently tested by the three NSRC-Is (n = 7331) and CDC (n = 2298).
The NI assay IC50s generated by respective NSRC-Is using viruses and drugs prepared by CDC were similar to those obtained with viruses and drugs prepared in-house, and were uniform between laboratories. IC50s for U.S. surveillance isolates tested during four consecutive influenza seasons (2011–15) were consistent from season to season, within and between laboratories.
These results show that the NI assay is robust enough to be standardized, marking the first time IC50 data have been normalized across multiple laboratories, and used for U.S. national NAI susceptibility surveillance.
•Three U.S. laboratories performed a standardized NI assay initially using reference viruses and drugs prepared by the CDC.•Subsequent preparation of viruses and drugs by each participating laboratory resulted in minimal variation in IC50s.•NI assay standardization was achieved through stepwise uniform procedures with support from the CDC reference laboratory.•WHO-AWVG criteria facilitated reporting of IC50 data generated by other laboratories, in U.S. national surveillance.</description><identifier>ISSN: 0166-3542</identifier><identifier>EISSN: 1872-9096</identifier><identifier>DOI: 10.1016/j.antiviral.2016.01.009</identifier><identifier>PMID: 26808479</identifier><language>eng</language><publisher>Netherlands: Elsevier B.V</publisher><subject>Assay standardization ; Centers for Disease Control and Prevention (U.S.) ; Drug Resistance, Viral ; Enzyme Assays - standards ; Epidemiological Monitoring ; Humans ; Influenza virus ; Influenza, Human - drug therapy ; Influenza, Human - enzymology ; Influenza, Human - epidemiology ; Inhibitory Concentration 50 ; Neuraminidase - antagonists & inhibitors ; Neuraminidase inhibition ; Oseltamivir ; Peramivir ; United States - epidemiology ; Zanamivir</subject><ispartof>Antiviral research, 2016-04, Vol.128, p.28-35</ispartof><rights>2016</rights><rights>Published by Elsevier B.V.</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c404t-b2d20ddae031b23fd0059f77cb46e3b5b4df679975d6e28323808b4bb40455693</citedby><cites>FETCH-LOGICAL-c404t-b2d20ddae031b23fd0059f77cb46e3b5b4df679975d6e28323808b4bb40455693</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S0166354216300110$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3537,27901,27902,65306</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/26808479$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Okomo-Adhiambo, M.</creatorcontrib><creatorcontrib>Mishin, V.P.</creatorcontrib><creatorcontrib>Sleeman, K.</creatorcontrib><creatorcontrib>Saguar, E.</creatorcontrib><creatorcontrib>Guevara, H.</creatorcontrib><creatorcontrib>Reisdorf, E.</creatorcontrib><creatorcontrib>Griesser, R.H.</creatorcontrib><creatorcontrib>Spackman, K.J.</creatorcontrib><creatorcontrib>Mendenhall, M.</creatorcontrib><creatorcontrib>Carlos, M.P.</creatorcontrib><creatorcontrib>Healey, B.</creatorcontrib><creatorcontrib>St. George, K.</creatorcontrib><creatorcontrib>Laplante, J.</creatorcontrib><creatorcontrib>Aden, T.</creatorcontrib><creatorcontrib>Chester, S.</creatorcontrib><creatorcontrib>Xu, X.</creatorcontrib><creatorcontrib>Gubareva, L.V.</creatorcontrib><title>Standardizing the influenza neuraminidase inhibition assay among United States public health laboratories conducting virological surveillance</title><title>Antiviral research</title><addtitle>Antiviral Res</addtitle><description>Monitoring influenza virus susceptibility to neuraminidase (NA) inhibitors (NAIs) is vital for detecting drug-resistant variants, and is primarily assessed using NA inhibition (NI) assays, supplemented by NA sequence analysis. However, differences in NI testing methodologies between surveillance laboratories results in variability of 50% inhibitory concentration (IC50) values, which impacts data sharing, reporting and interpretation. In 2011, the Centers for Disease Control and Prevention (CDC), in collaboration with the Association for Public Health Laboratories (APHL) spearheaded efforts to standardize fluorescence-based NI assay testing in the United States (U.S.), with the goal of achieving consistency of IC50 data.
For the standardization process, three participating state public health laboratories (PHLs), designated as National Surveillance Reference Centers for Influenza (NSRC-Is), assessed the NAI susceptibility of the 2011–12 CDC reference virus panel using stepwise procedures, with support from the CDC reference laboratory. Next, the NSRC-Is assessed the NAI susceptibility of season 2011–12 U.S. influenza surveillance isolates (n = 940), with a large subset (n = 742) tested in parallel by CDC. Subsequently, U.S. influenza surveillance isolates (n = 9629) circulating during the next three influenza seasons (2012–15), were independently tested by the three NSRC-Is (n = 7331) and CDC (n = 2298).
The NI assay IC50s generated by respective NSRC-Is using viruses and drugs prepared by CDC were similar to those obtained with viruses and drugs prepared in-house, and were uniform between laboratories. IC50s for U.S. surveillance isolates tested during four consecutive influenza seasons (2011–15) were consistent from season to season, within and between laboratories.
These results show that the NI assay is robust enough to be standardized, marking the first time IC50 data have been normalized across multiple laboratories, and used for U.S. national NAI susceptibility surveillance.
•Three U.S. laboratories performed a standardized NI assay initially using reference viruses and drugs prepared by the CDC.•Subsequent preparation of viruses and drugs by each participating laboratory resulted in minimal variation in IC50s.•NI assay standardization was achieved through stepwise uniform procedures with support from the CDC reference laboratory.•WHO-AWVG criteria facilitated reporting of IC50 data generated by other laboratories, in U.S. national surveillance.</description><subject>Assay standardization</subject><subject>Centers for Disease Control and Prevention (U.S.)</subject><subject>Drug Resistance, Viral</subject><subject>Enzyme Assays - standards</subject><subject>Epidemiological Monitoring</subject><subject>Humans</subject><subject>Influenza virus</subject><subject>Influenza, Human - drug therapy</subject><subject>Influenza, Human - enzymology</subject><subject>Influenza, Human - epidemiology</subject><subject>Inhibitory Concentration 50</subject><subject>Neuraminidase - antagonists & inhibitors</subject><subject>Neuraminidase inhibition</subject><subject>Oseltamivir</subject><subject>Peramivir</subject><subject>United States - epidemiology</subject><subject>Zanamivir</subject><issn>0166-3542</issn><issn>1872-9096</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNUU1v1DAQtRCILoW_ADlySbCdxEmOVUUBqRIH6Nnyx6Q7K8debGel9j_wn3G0pVc4jTTz3rw38wj5wGjDKBOfDo3yGU8YlWt4aTSUNZROL8iOjQOvJzqJl2RXBqJu-45fkDcpHSilYpjG1-SCi5GO3TDtyO8fWXmrosVH9PdV3kOFfnYr-EdVeVijWtCjVWnr71FjxuArlZJ6qNQSCuXOYwZblT0ZUnVctUNT7UG5vK-c0iGqHCKWkQneriZvMsV4cOEejXJVWuMJ0DnlDbwlr2blErx7qpfk7ubzz-uv9e33L9-ur25r09Eu15pbTq1VQFumeTtbSvtpHgajOwGt7nVn53LpNPRWAB9b3pZzdad1Yfe9mNpL8vG89xjDrxVSlgsmA5sJCGuSbBjakYuW_ReUdT0TPSvQ4Qw1MaQUYZbHiIuKD5JRucUmD_I5NrnFJimTJbbCfP8ksuoF7DPvb04FcHUGQPnKCSHKZBDKxyxGMFnagP8U-QPDM7Fu</recordid><startdate>201604</startdate><enddate>201604</enddate><creator>Okomo-Adhiambo, M.</creator><creator>Mishin, V.P.</creator><creator>Sleeman, K.</creator><creator>Saguar, E.</creator><creator>Guevara, H.</creator><creator>Reisdorf, E.</creator><creator>Griesser, R.H.</creator><creator>Spackman, K.J.</creator><creator>Mendenhall, M.</creator><creator>Carlos, M.P.</creator><creator>Healey, B.</creator><creator>St. George, K.</creator><creator>Laplante, J.</creator><creator>Aden, T.</creator><creator>Chester, S.</creator><creator>Xu, X.</creator><creator>Gubareva, L.V.</creator><general>Elsevier B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7T2</scope><scope>7T7</scope><scope>7U2</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>P64</scope></search><sort><creationdate>201604</creationdate><title>Standardizing the influenza neuraminidase inhibition assay among United States public health laboratories conducting virological surveillance</title><author>Okomo-Adhiambo, M. ; Mishin, V.P. ; Sleeman, K. ; Saguar, E. ; Guevara, H. ; Reisdorf, E. ; Griesser, R.H. ; Spackman, K.J. ; Mendenhall, M. ; Carlos, M.P. ; Healey, B. ; St. George, K. ; Laplante, J. ; Aden, T. ; Chester, S. ; Xu, X. ; Gubareva, L.V.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c404t-b2d20ddae031b23fd0059f77cb46e3b5b4df679975d6e28323808b4bb40455693</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Assay standardization</topic><topic>Centers for Disease Control and Prevention (U.S.)</topic><topic>Drug Resistance, Viral</topic><topic>Enzyme Assays - standards</topic><topic>Epidemiological Monitoring</topic><topic>Humans</topic><topic>Influenza virus</topic><topic>Influenza, Human - drug therapy</topic><topic>Influenza, Human - enzymology</topic><topic>Influenza, Human - epidemiology</topic><topic>Inhibitory Concentration 50</topic><topic>Neuraminidase - antagonists & inhibitors</topic><topic>Neuraminidase inhibition</topic><topic>Oseltamivir</topic><topic>Peramivir</topic><topic>United States - epidemiology</topic><topic>Zanamivir</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Okomo-Adhiambo, M.</creatorcontrib><creatorcontrib>Mishin, V.P.</creatorcontrib><creatorcontrib>Sleeman, K.</creatorcontrib><creatorcontrib>Saguar, E.</creatorcontrib><creatorcontrib>Guevara, H.</creatorcontrib><creatorcontrib>Reisdorf, E.</creatorcontrib><creatorcontrib>Griesser, R.H.</creatorcontrib><creatorcontrib>Spackman, K.J.</creatorcontrib><creatorcontrib>Mendenhall, M.</creatorcontrib><creatorcontrib>Carlos, M.P.</creatorcontrib><creatorcontrib>Healey, B.</creatorcontrib><creatorcontrib>St. George, K.</creatorcontrib><creatorcontrib>Laplante, J.</creatorcontrib><creatorcontrib>Aden, T.</creatorcontrib><creatorcontrib>Chester, S.</creatorcontrib><creatorcontrib>Xu, X.</creatorcontrib><creatorcontrib>Gubareva, L.V.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Health and Safety Science Abstracts (Full archive)</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Safety Science and Risk</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Biotechnology and BioEngineering Abstracts</collection><jtitle>Antiviral research</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Okomo-Adhiambo, M.</au><au>Mishin, V.P.</au><au>Sleeman, K.</au><au>Saguar, E.</au><au>Guevara, H.</au><au>Reisdorf, E.</au><au>Griesser, R.H.</au><au>Spackman, K.J.</au><au>Mendenhall, M.</au><au>Carlos, M.P.</au><au>Healey, B.</au><au>St. George, K.</au><au>Laplante, J.</au><au>Aden, T.</au><au>Chester, S.</au><au>Xu, X.</au><au>Gubareva, L.V.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Standardizing the influenza neuraminidase inhibition assay among United States public health laboratories conducting virological surveillance</atitle><jtitle>Antiviral research</jtitle><addtitle>Antiviral Res</addtitle><date>2016-04</date><risdate>2016</risdate><volume>128</volume><spage>28</spage><epage>35</epage><pages>28-35</pages><issn>0166-3542</issn><eissn>1872-9096</eissn><abstract>Monitoring influenza virus susceptibility to neuraminidase (NA) inhibitors (NAIs) is vital for detecting drug-resistant variants, and is primarily assessed using NA inhibition (NI) assays, supplemented by NA sequence analysis. However, differences in NI testing methodologies between surveillance laboratories results in variability of 50% inhibitory concentration (IC50) values, which impacts data sharing, reporting and interpretation. In 2011, the Centers for Disease Control and Prevention (CDC), in collaboration with the Association for Public Health Laboratories (APHL) spearheaded efforts to standardize fluorescence-based NI assay testing in the United States (U.S.), with the goal of achieving consistency of IC50 data.
For the standardization process, three participating state public health laboratories (PHLs), designated as National Surveillance Reference Centers for Influenza (NSRC-Is), assessed the NAI susceptibility of the 2011–12 CDC reference virus panel using stepwise procedures, with support from the CDC reference laboratory. Next, the NSRC-Is assessed the NAI susceptibility of season 2011–12 U.S. influenza surveillance isolates (n = 940), with a large subset (n = 742) tested in parallel by CDC. Subsequently, U.S. influenza surveillance isolates (n = 9629) circulating during the next three influenza seasons (2012–15), were independently tested by the three NSRC-Is (n = 7331) and CDC (n = 2298).
The NI assay IC50s generated by respective NSRC-Is using viruses and drugs prepared by CDC were similar to those obtained with viruses and drugs prepared in-house, and were uniform between laboratories. IC50s for U.S. surveillance isolates tested during four consecutive influenza seasons (2011–15) were consistent from season to season, within and between laboratories.
These results show that the NI assay is robust enough to be standardized, marking the first time IC50 data have been normalized across multiple laboratories, and used for U.S. national NAI susceptibility surveillance.
•Three U.S. laboratories performed a standardized NI assay initially using reference viruses and drugs prepared by the CDC.•Subsequent preparation of viruses and drugs by each participating laboratory resulted in minimal variation in IC50s.•NI assay standardization was achieved through stepwise uniform procedures with support from the CDC reference laboratory.•WHO-AWVG criteria facilitated reporting of IC50 data generated by other laboratories, in U.S. national surveillance.</abstract><cop>Netherlands</cop><pub>Elsevier B.V</pub><pmid>26808479</pmid><doi>10.1016/j.antiviral.2016.01.009</doi><tpages>8</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Assay standardization Centers for Disease Control and Prevention (U.S.) Drug Resistance, Viral Enzyme Assays - standards Epidemiological Monitoring Humans Influenza virus Influenza, Human - drug therapy Influenza, Human - enzymology Influenza, Human - epidemiology Inhibitory Concentration 50 Neuraminidase - antagonists & inhibitors Neuraminidase inhibition Oseltamivir Peramivir United States - epidemiology Zanamivir |
title | Standardizing the influenza neuraminidase inhibition assay among United States public health laboratories conducting virological surveillance |
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