Antibody-coupled siRNA as an efficient method for in vivo mRNA knockdown

This virus-free approach for mRNA knockdown in vivo uses the siRNA carrier peptide protamine, chemically coupled to a cell surface receptor internalizing antibodies via sulfo-SMCC, to provide protection and guidance for the targeted application of siRNA. Knockdown of genes by RNA interference (RNAi)...

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Veröffentlicht in:Nature protocols 2016-01, Vol.11 (1), p.22-36
Hauptverfasser: Bäumer, Nicole, Appel, Neele, Terheyden, Lisa, Buchholz, Frank, Rossig, Claudia, Müller-Tidow, Carsten, Berdel, Wolfgang E, Bäumer, Sebastian
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container_issue 1
container_start_page 22
container_title Nature protocols
container_volume 11
creator Bäumer, Nicole
Appel, Neele
Terheyden, Lisa
Buchholz, Frank
Rossig, Claudia
Müller-Tidow, Carsten
Berdel, Wolfgang E
Bäumer, Sebastian
description This virus-free approach for mRNA knockdown in vivo uses the siRNA carrier peptide protamine, chemically coupled to a cell surface receptor internalizing antibodies via sulfo-SMCC, to provide protection and guidance for the targeted application of siRNA. Knockdown of genes by RNA interference (RNAi) in vitro requires methods of transfection or transduction, both of which have limited impact in vivo . As a virus-free approach, we chemically coupled cell surface receptors internalizing antibodies to the short interfering RNA (siRNA) carrier peptide protamine using the bispecific cross-linker sulfo-SMCC (sulfosuccinimidyl 4-( N -maleimidomethyl)cyclohexane-1-carboxylate). First, protamine was conjugated amino-terminally to sulfo-SMCC, and then this conjugate was coupled via cysteine residues to the IgG backbone to carry siRNA. This complex can efficiently find, bind and internalize into receptor-positive cells in vitro and in vivo , which can be checked by flow cytometry, fluorescence microscopy and western blotting. This method obtains results similar to those of siRNA targeting molecules engineered by genetic fusions between receptor-binding and siRNA carrier units, with the advantage of using readily available purified proteins without the need for engineering, expression and purification of respective constructs. The procedure for coupling the complex takes ∼2 d, and the functional assays take ∼2 weeks.
doi_str_mv 10.1038/nprot.2015.137
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subjects 631/1647/1407/505
631/45/2783
631/61/2299
631/61/51/1568
Analytical Chemistry
Animals
Antibodies
Antibodies - chemistry
Antibodies - immunology
Antibodies - metabolism
Biological Techniques
Cell Line, Tumor
Cellular proteins
Computational Biology/Bioinformatics
Drug Carriers - chemistry
Drug Carriers - metabolism
Flow cytometry
Fluorescence microscopy
Gene expression
Gene Knockdown Techniques - methods
Genes
Genetic engineering
Growth factors
Hematology
Hospitals
Humans
Life Sciences
Maleimides - chemistry
Methods
Mice
Microarrays
Microscopy
Observations
Oncology
Organic Chemistry
Peptides
Properties
Protamines - chemistry
Protamines - metabolism
Protocol
Receptor, Epidermal Growth Factor - immunology
RNA Interference
RNA, Messenger - genetics
RNA, Messenger - metabolism
RNA, Small Interfering - chemistry
RNA, Small Interfering - genetics
RNA, Small Interfering - metabolism
title Antibody-coupled siRNA as an efficient method for in vivo mRNA knockdown
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