Degradation of phenanthrene by the rhizobacterium Ensifer meliloti
The biodegradation of the polycyclic aromatic hydrocarbon phenantherene by the rhizobacterial strain Ensifer meliloti P221, isolated from the root zone of plant grown in PAH-contaminated soil was studied. Bacterial growth and phenanthrene degradation under the influence of root-exuded organic acids...
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creator | Muratova, Anna Pozdnyakova, Natalya Makarov, Oleg Baboshin, Mikhail Baskunov, Boris Myasoedova, Nina Golovleva, Ludmila Turkovskaya, Olga |
description | The biodegradation of the polycyclic aromatic hydrocarbon phenantherene by the rhizobacterial strain
Ensifer meliloti
P221, isolated from the root zone of plant grown in PAH-contaminated soil was studied. Bacterial growth and phenanthrene degradation under the influence of root-exuded organic acids were also investigated. Analysis of the metabolites produced by the strain by using thin-layer chromatography, gas chromatography, high-pressure liquid chromatography, and mass-spectrometry revealed that phenanthrene is bioconverted via two parallel pathways. The first, major pathway is through terminal aromatic ring cleavage (presumably at the C3–C4 bond) producing benzocoumarin and 1-hydroxy-2-naphthoic acid, whose further degradation with the formation of salicylic acid is difficult or is very slow. The second pathway is through the oxidation of the central aromatic ring at the C9–C10 bond, producing 9,10-dihydro-9,10-dihydroxyphenanthrene, 9,10-phenanthrenequinone, and 2,2′-diphenic acid. This is the first time that the dioxygenation of phenanthrene at the C9 and C10 atoms, proven by identification of characteristic metabolites, has been reported for a bacterium of the
Ensifer
genus. |
doi_str_mv | 10.1007/s10532-014-9699-9 |
format | Article |
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Ensifer meliloti
P221, isolated from the root zone of plant grown in PAH-contaminated soil was studied. Bacterial growth and phenanthrene degradation under the influence of root-exuded organic acids were also investigated. Analysis of the metabolites produced by the strain by using thin-layer chromatography, gas chromatography, high-pressure liquid chromatography, and mass-spectrometry revealed that phenanthrene is bioconverted via two parallel pathways. The first, major pathway is through terminal aromatic ring cleavage (presumably at the C3–C4 bond) producing benzocoumarin and 1-hydroxy-2-naphthoic acid, whose further degradation with the formation of salicylic acid is difficult or is very slow. The second pathway is through the oxidation of the central aromatic ring at the C9–C10 bond, producing 9,10-dihydro-9,10-dihydroxyphenanthrene, 9,10-phenanthrenequinone, and 2,2′-diphenic acid. This is the first time that the dioxygenation of phenanthrene at the C9 and C10 atoms, proven by identification of characteristic metabolites, has been reported for a bacterium of the
Ensifer
genus.</description><identifier>ISSN: 0923-9820</identifier><identifier>EISSN: 1572-9729</identifier><identifier>DOI: 10.1007/s10532-014-9699-9</identifier><identifier>PMID: 25052918</identifier><language>eng</language><publisher>Dordrecht: Springer Netherlands</publisher><subject>Analysis ; Aquatic Pollution ; Aromatic compounds ; Aromatic hydrocarbons ; Bacteria ; Biodegradation ; Biodegradation, Environmental ; Biomedical and Life Sciences ; Biphenyl Compounds - metabolism ; Degradation ; Gas chromatography ; Geochemistry ; High performance liquid chromatography ; Life Sciences ; Liquid chromatography ; Metabolites ; Microbiology ; Naphthols - metabolism ; Organic acids ; Original Paper ; Pathways ; Phenanthrene ; Phenanthrenes - metabolism ; Polycyclic aromatic hydrocarbons ; Rhizobium - metabolism ; Root zone ; Soil contamination ; Soil microbiology ; Soil Science & Conservation ; Spectrometry ; Strain ; Terrestrial Pollution ; Thin layer chromatography ; Waste Management/Waste Technology ; Waste Water Technology ; Water Management ; Water Pollution Control</subject><ispartof>Biodegradation (Dordrecht), 2014-11, Vol.25 (6), p.787-795</ispartof><rights>Springer Science+Business Media Dordrecht 2014</rights><rights>COPYRIGHT 2014 Springer</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c538t-4d77b38871704164a4e4ea6292fdcc32905fff33554cf2ff582aad92051c91d73</citedby><cites>FETCH-LOGICAL-c538t-4d77b38871704164a4e4ea6292fdcc32905fff33554cf2ff582aad92051c91d73</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s10532-014-9699-9$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s10532-014-9699-9$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,780,784,27924,27925,41488,42557,51319</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/25052918$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Muratova, Anna</creatorcontrib><creatorcontrib>Pozdnyakova, Natalya</creatorcontrib><creatorcontrib>Makarov, Oleg</creatorcontrib><creatorcontrib>Baboshin, Mikhail</creatorcontrib><creatorcontrib>Baskunov, Boris</creatorcontrib><creatorcontrib>Myasoedova, Nina</creatorcontrib><creatorcontrib>Golovleva, Ludmila</creatorcontrib><creatorcontrib>Turkovskaya, Olga</creatorcontrib><title>Degradation of phenanthrene by the rhizobacterium Ensifer meliloti</title><title>Biodegradation (Dordrecht)</title><addtitle>Biodegradation</addtitle><addtitle>Biodegradation</addtitle><description>The biodegradation of the polycyclic aromatic hydrocarbon phenantherene by the rhizobacterial strain
Ensifer meliloti
P221, isolated from the root zone of plant grown in PAH-contaminated soil was studied. Bacterial growth and phenanthrene degradation under the influence of root-exuded organic acids were also investigated. Analysis of the metabolites produced by the strain by using thin-layer chromatography, gas chromatography, high-pressure liquid chromatography, and mass-spectrometry revealed that phenanthrene is bioconverted via two parallel pathways. The first, major pathway is through terminal aromatic ring cleavage (presumably at the C3–C4 bond) producing benzocoumarin and 1-hydroxy-2-naphthoic acid, whose further degradation with the formation of salicylic acid is difficult or is very slow. The second pathway is through the oxidation of the central aromatic ring at the C9–C10 bond, producing 9,10-dihydro-9,10-dihydroxyphenanthrene, 9,10-phenanthrenequinone, and 2,2′-diphenic acid. This is the first time that the dioxygenation of phenanthrene at the C9 and C10 atoms, proven by identification of characteristic metabolites, has been reported for a bacterium of the
Ensifer
genus.</description><subject>Analysis</subject><subject>Aquatic Pollution</subject><subject>Aromatic compounds</subject><subject>Aromatic hydrocarbons</subject><subject>Bacteria</subject><subject>Biodegradation</subject><subject>Biodegradation, Environmental</subject><subject>Biomedical and Life Sciences</subject><subject>Biphenyl Compounds - metabolism</subject><subject>Degradation</subject><subject>Gas chromatography</subject><subject>Geochemistry</subject><subject>High performance liquid chromatography</subject><subject>Life Sciences</subject><subject>Liquid chromatography</subject><subject>Metabolites</subject><subject>Microbiology</subject><subject>Naphthols - metabolism</subject><subject>Organic acids</subject><subject>Original Paper</subject><subject>Pathways</subject><subject>Phenanthrene</subject><subject>Phenanthrenes - metabolism</subject><subject>Polycyclic aromatic hydrocarbons</subject><subject>Rhizobium - metabolism</subject><subject>Root zone</subject><subject>Soil contamination</subject><subject>Soil microbiology</subject><subject>Soil Science & Conservation</subject><subject>Spectrometry</subject><subject>Strain</subject><subject>Terrestrial Pollution</subject><subject>Thin layer chromatography</subject><subject>Waste Management/Waste Technology</subject><subject>Waste Water Technology</subject><subject>Water Management</subject><subject>Water Pollution Control</subject><issn>0923-9820</issn><issn>1572-9729</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNqNkktv1DAUhS0EokPhB7BBkdiwSbm-juN4WUp5SJW6gbXlca5nXCX2YCeL9teTYVpeagXywpLvd47ukQ9jLzmccAD1tnCQAmvgTa1brWv9iK24VFhrhfoxW4FGUesO4Yg9K-UKALQCfMqOUIJEzbsVe_eeNtn2dgopVslXuy1FG6dtpkjV-rqatlTlbbhJa-smymEeq_NYgqdcjTSEIU3hOXvi7VDoxe19zL5-OP9y9qm-uPz4-ez0onZSdFPd9EqtRdcprqDhbWMbasi2qNH3zgnUIL33QkjZOI_eyw6t7TWC5E7zXolj9ubgu8vp20xlMmMojobBRkpzMVwpELwBzf-NyrbtRKcA_gfFthWNkAv6-i_0Ks05Lpl_UKCE6PAXtbEDmRB9mrJ1e1NzqjiiblHohTq5h1pOT2NwKZIPy_sfAn4QuJxKyeTNLofR5mvDwezbYA5tMEsbzL4NZq95dbvwvB6p_6m4-_4FwANQllHcUP4t0YOu3wF2trtY</recordid><startdate>20141101</startdate><enddate>20141101</enddate><creator>Muratova, Anna</creator><creator>Pozdnyakova, Natalya</creator><creator>Makarov, Oleg</creator><creator>Baboshin, Mikhail</creator><creator>Baskunov, Boris</creator><creator>Myasoedova, Nina</creator><creator>Golovleva, Ludmila</creator><creator>Turkovskaya, Olga</creator><general>Springer Netherlands</general><general>Springer</general><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7ST</scope><scope>7T7</scope><scope>7UA</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>88I</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>BKSAR</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>F1W</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H97</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>L.G</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2P</scope><scope>M7N</scope><scope>M7P</scope><scope>P64</scope><scope>PCBAR</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>SOI</scope><scope>7X8</scope><scope>7QO</scope><scope>KR7</scope></search><sort><creationdate>20141101</creationdate><title>Degradation of phenanthrene by the rhizobacterium Ensifer meliloti</title><author>Muratova, Anna ; Pozdnyakova, Natalya ; Makarov, Oleg ; Baboshin, Mikhail ; Baskunov, Boris ; Myasoedova, Nina ; Golovleva, Ludmila ; Turkovskaya, Olga</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c538t-4d77b38871704164a4e4ea6292fdcc32905fff33554cf2ff582aad92051c91d73</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>Analysis</topic><topic>Aquatic Pollution</topic><topic>Aromatic compounds</topic><topic>Aromatic hydrocarbons</topic><topic>Bacteria</topic><topic>Biodegradation</topic><topic>Biodegradation, Environmental</topic><topic>Biomedical and Life Sciences</topic><topic>Biphenyl Compounds - 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Academic</collection><collection>Biotechnology Research Abstracts</collection><collection>Civil Engineering Abstracts</collection><jtitle>Biodegradation (Dordrecht)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Muratova, Anna</au><au>Pozdnyakova, Natalya</au><au>Makarov, Oleg</au><au>Baboshin, Mikhail</au><au>Baskunov, Boris</au><au>Myasoedova, Nina</au><au>Golovleva, Ludmila</au><au>Turkovskaya, Olga</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Degradation of phenanthrene by the rhizobacterium Ensifer meliloti</atitle><jtitle>Biodegradation (Dordrecht)</jtitle><stitle>Biodegradation</stitle><addtitle>Biodegradation</addtitle><date>2014-11-01</date><risdate>2014</risdate><volume>25</volume><issue>6</issue><spage>787</spage><epage>795</epage><pages>787-795</pages><issn>0923-9820</issn><eissn>1572-9729</eissn><abstract>The biodegradation of the polycyclic aromatic hydrocarbon phenantherene by the rhizobacterial strain
Ensifer meliloti
P221, isolated from the root zone of plant grown in PAH-contaminated soil was studied. Bacterial growth and phenanthrene degradation under the influence of root-exuded organic acids were also investigated. Analysis of the metabolites produced by the strain by using thin-layer chromatography, gas chromatography, high-pressure liquid chromatography, and mass-spectrometry revealed that phenanthrene is bioconverted via two parallel pathways. The first, major pathway is through terminal aromatic ring cleavage (presumably at the C3–C4 bond) producing benzocoumarin and 1-hydroxy-2-naphthoic acid, whose further degradation with the formation of salicylic acid is difficult or is very slow. The second pathway is through the oxidation of the central aromatic ring at the C9–C10 bond, producing 9,10-dihydro-9,10-dihydroxyphenanthrene, 9,10-phenanthrenequinone, and 2,2′-diphenic acid. This is the first time that the dioxygenation of phenanthrene at the C9 and C10 atoms, proven by identification of characteristic metabolites, has been reported for a bacterium of the
Ensifer
genus.</abstract><cop>Dordrecht</cop><pub>Springer Netherlands</pub><pmid>25052918</pmid><doi>10.1007/s10532-014-9699-9</doi><tpages>9</tpages></addata></record> |
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subjects | Analysis Aquatic Pollution Aromatic compounds Aromatic hydrocarbons Bacteria Biodegradation Biodegradation, Environmental Biomedical and Life Sciences Biphenyl Compounds - metabolism Degradation Gas chromatography Geochemistry High performance liquid chromatography Life Sciences Liquid chromatography Metabolites Microbiology Naphthols - metabolism Organic acids Original Paper Pathways Phenanthrene Phenanthrenes - metabolism Polycyclic aromatic hydrocarbons Rhizobium - metabolism Root zone Soil contamination Soil microbiology Soil Science & Conservation Spectrometry Strain Terrestrial Pollution Thin layer chromatography Waste Management/Waste Technology Waste Water Technology Water Management Water Pollution Control |
title | Degradation of phenanthrene by the rhizobacterium Ensifer meliloti |
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