Automated segmentation of the injured spleen

Purpose To develop a novel automated method for segmentation of the injured spleen using morphological properties following abdominal trauma. Average attenuation of a normal spleen in computed tomography (CT) does not vary significantly between subjects. However, in the case of solid organ injury, t...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:International journal for computer assisted radiology and surgery 2016-03, Vol.11 (3), p.351-368
Hauptverfasser: Dandin, Ozgür, Teomete, Uygar, Osman, Onur, Tulum, Gökalp, Ergin, Tuncer, Sabuncuoglu, Mehmet Zafer
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 368
container_issue 3
container_start_page 351
container_title International journal for computer assisted radiology and surgery
container_volume 11
creator Dandin, Ozgür
Teomete, Uygar
Osman, Onur
Tulum, Gökalp
Ergin, Tuncer
Sabuncuoglu, Mehmet Zafer
description Purpose To develop a novel automated method for segmentation of the injured spleen using morphological properties following abdominal trauma. Average attenuation of a normal spleen in computed tomography (CT) does not vary significantly between subjects. However, in the case of solid organ injury, the shape and attenuation of the spleen on CT may vary depending on the time and severity of the injury. Timely assessment of the severity and extent of the injury is of vital importance in the setting of trauma. Methods We developed an automated computer-aided method for segmenting the injured spleen from CT scans of patients who had splenectomy due to abdominal trauma. We used ten subjects to train our computer-aided diagnosis (CAD) method. To validate the CAD method, we used twenty subjects in our testing group. Probabilistic atlases of the spleens were created using manually segmented data from ten CT scans. The organ location was modeled based on the position of the spleen with respect to the left side of the spine followed by the extraction of shape features. We performed the spleen segmentation in three steps. First, we created a mask of the spleen, and then we used this mask to segment the spleen. The third and final step was the estimation of the spleen edges in the presence of an injury such as laceration or hematoma. Results The traumatized spleens were segmented with a high degree of agreement with the radiologist-drawn contours. The spleen quantification led to 86 ± 5 % volume overlap, 92.5 ± 3.11 % Dice similarity index, 89.05 ± 5.29 % / 96.42 ± 2.55 precision/sensitivity, 8 ± 5 % volume estimation error rate, 1.09 ± 0.62 / 1.91 ± 1.45 mm average surface distance/root-mean-squared error. Conclusions Our CAD method robustly segments the spleen in the presence of morphological changes such as laceration, contusion, pseudoaneurysm, active bleeding, periorgan and parenchymal hematoma, including subcapsular hematoma due to abdominal trauma. CAD of the splenic injury due to abdominal trauma can assist in rapid diagnosis and assessment and guide clinical management. Our segmentation method is a general framework that can be adapted to segment other injured solid abdominal organs.
doi_str_mv 10.1007/s11548-015-1288-9
format Article
fullrecord <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_1768557973</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>1768557973</sourcerecordid><originalsourceid>FETCH-LOGICAL-c414t-adc619e924f8a7e554c7ccdc98af871fce45cc8fe50406ff4a1408d88da0edec3</originalsourceid><addsrcrecordid>eNp9kD1PwzAQhi0EoqXwA1hQRgYCvsSOnbGq-JIqscBsGftcUiVxsZ2Bf0-qlI5Md9I97yvdQ8g10HugVDxEAM5kToHnUEiZ1ydkDrKCvGJFfXrcgc7IRYxbShkXJT8ns6IqS8FYOSd3yyH5Tie0WcRNh33SqfF95l2WvjBr-u0Q9rddi9hfkjOn24hXh7kgH0-P76uXfP32_LparnPDgKVcW1NBjXXBnNQCOWdGGGNNLbWTApxBxo2RDjlltHKOaWBUWimtpmjRlAtyO_Xugv8eMCbVNdFg2-oe_RAViEpyLmpRjihMqAk-xoBO7ULT6fCjgKq9JDVJUqMktZek6jFzc6gfPju0x8SflREoJiCOp36DQW39EPrx5X9afwEQt3I0</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1768557973</pqid></control><display><type>article</type><title>Automated segmentation of the injured spleen</title><source>MEDLINE</source><source>Springer Nature - Complete Springer Journals</source><creator>Dandin, Ozgür ; Teomete, Uygar ; Osman, Onur ; Tulum, Gökalp ; Ergin, Tuncer ; Sabuncuoglu, Mehmet Zafer</creator><creatorcontrib>Dandin, Ozgür ; Teomete, Uygar ; Osman, Onur ; Tulum, Gökalp ; Ergin, Tuncer ; Sabuncuoglu, Mehmet Zafer</creatorcontrib><description>Purpose To develop a novel automated method for segmentation of the injured spleen using morphological properties following abdominal trauma. Average attenuation of a normal spleen in computed tomography (CT) does not vary significantly between subjects. However, in the case of solid organ injury, the shape and attenuation of the spleen on CT may vary depending on the time and severity of the injury. Timely assessment of the severity and extent of the injury is of vital importance in the setting of trauma. Methods We developed an automated computer-aided method for segmenting the injured spleen from CT scans of patients who had splenectomy due to abdominal trauma. We used ten subjects to train our computer-aided diagnosis (CAD) method. To validate the CAD method, we used twenty subjects in our testing group. Probabilistic atlases of the spleens were created using manually segmented data from ten CT scans. The organ location was modeled based on the position of the spleen with respect to the left side of the spine followed by the extraction of shape features. We performed the spleen segmentation in three steps. First, we created a mask of the spleen, and then we used this mask to segment the spleen. The third and final step was the estimation of the spleen edges in the presence of an injury such as laceration or hematoma. Results The traumatized spleens were segmented with a high degree of agreement with the radiologist-drawn contours. The spleen quantification led to 86 ± 5 % volume overlap, 92.5 ± 3.11 % Dice similarity index, 89.05 ± 5.29 % / 96.42 ± 2.55 precision/sensitivity, 8 ± 5 % volume estimation error rate, 1.09 ± 0.62 / 1.91 ± 1.45 mm average surface distance/root-mean-squared error. Conclusions Our CAD method robustly segments the spleen in the presence of morphological changes such as laceration, contusion, pseudoaneurysm, active bleeding, periorgan and parenchymal hematoma, including subcapsular hematoma due to abdominal trauma. CAD of the splenic injury due to abdominal trauma can assist in rapid diagnosis and assessment and guide clinical management. Our segmentation method is a general framework that can be adapted to segment other injured solid abdominal organs.</description><identifier>ISSN: 1861-6410</identifier><identifier>EISSN: 1861-6429</identifier><identifier>DOI: 10.1007/s11548-015-1288-9</identifier><identifier>PMID: 26337443</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer Berlin Heidelberg</publisher><subject>Abdominal Injuries - diagnostic imaging ; Adolescent ; Adult ; Aged ; Computer Imaging ; Computer Science ; Female ; Florida ; Health Informatics ; Humans ; Imaging ; Male ; Medicine ; Medicine &amp; Public Health ; Middle Aged ; Original Article ; Pattern Recognition and Graphics ; Radiographic Image Enhancement ; Radiographic Image Interpretation, Computer-Assisted ; Radiology ; Reproducibility of Results ; Sensitivity and Specificity ; Spleen - diagnostic imaging ; Spleen - injuries ; Surgery ; Tomography, X-Ray Computed - standards ; Vision ; Young Adult</subject><ispartof>International journal for computer assisted radiology and surgery, 2016-03, Vol.11 (3), p.351-368</ispartof><rights>CARS 2015</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c414t-adc619e924f8a7e554c7ccdc98af871fce45cc8fe50406ff4a1408d88da0edec3</citedby><cites>FETCH-LOGICAL-c414t-adc619e924f8a7e554c7ccdc98af871fce45cc8fe50406ff4a1408d88da0edec3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s11548-015-1288-9$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s11548-015-1288-9$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27903,27904,41467,42536,51297</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/26337443$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Dandin, Ozgür</creatorcontrib><creatorcontrib>Teomete, Uygar</creatorcontrib><creatorcontrib>Osman, Onur</creatorcontrib><creatorcontrib>Tulum, Gökalp</creatorcontrib><creatorcontrib>Ergin, Tuncer</creatorcontrib><creatorcontrib>Sabuncuoglu, Mehmet Zafer</creatorcontrib><title>Automated segmentation of the injured spleen</title><title>International journal for computer assisted radiology and surgery</title><addtitle>Int J CARS</addtitle><addtitle>Int J Comput Assist Radiol Surg</addtitle><description>Purpose To develop a novel automated method for segmentation of the injured spleen using morphological properties following abdominal trauma. Average attenuation of a normal spleen in computed tomography (CT) does not vary significantly between subjects. However, in the case of solid organ injury, the shape and attenuation of the spleen on CT may vary depending on the time and severity of the injury. Timely assessment of the severity and extent of the injury is of vital importance in the setting of trauma. Methods We developed an automated computer-aided method for segmenting the injured spleen from CT scans of patients who had splenectomy due to abdominal trauma. We used ten subjects to train our computer-aided diagnosis (CAD) method. To validate the CAD method, we used twenty subjects in our testing group. Probabilistic atlases of the spleens were created using manually segmented data from ten CT scans. The organ location was modeled based on the position of the spleen with respect to the left side of the spine followed by the extraction of shape features. We performed the spleen segmentation in three steps. First, we created a mask of the spleen, and then we used this mask to segment the spleen. The third and final step was the estimation of the spleen edges in the presence of an injury such as laceration or hematoma. Results The traumatized spleens were segmented with a high degree of agreement with the radiologist-drawn contours. The spleen quantification led to 86 ± 5 % volume overlap, 92.5 ± 3.11 % Dice similarity index, 89.05 ± 5.29 % / 96.42 ± 2.55 precision/sensitivity, 8 ± 5 % volume estimation error rate, 1.09 ± 0.62 / 1.91 ± 1.45 mm average surface distance/root-mean-squared error. Conclusions Our CAD method robustly segments the spleen in the presence of morphological changes such as laceration, contusion, pseudoaneurysm, active bleeding, periorgan and parenchymal hematoma, including subcapsular hematoma due to abdominal trauma. CAD of the splenic injury due to abdominal trauma can assist in rapid diagnosis and assessment and guide clinical management. Our segmentation method is a general framework that can be adapted to segment other injured solid abdominal organs.</description><subject>Abdominal Injuries - diagnostic imaging</subject><subject>Adolescent</subject><subject>Adult</subject><subject>Aged</subject><subject>Computer Imaging</subject><subject>Computer Science</subject><subject>Female</subject><subject>Florida</subject><subject>Health Informatics</subject><subject>Humans</subject><subject>Imaging</subject><subject>Male</subject><subject>Medicine</subject><subject>Medicine &amp; Public Health</subject><subject>Middle Aged</subject><subject>Original Article</subject><subject>Pattern Recognition and Graphics</subject><subject>Radiographic Image Enhancement</subject><subject>Radiographic Image Interpretation, Computer-Assisted</subject><subject>Radiology</subject><subject>Reproducibility of Results</subject><subject>Sensitivity and Specificity</subject><subject>Spleen - diagnostic imaging</subject><subject>Spleen - injuries</subject><subject>Surgery</subject><subject>Tomography, X-Ray Computed - standards</subject><subject>Vision</subject><subject>Young Adult</subject><issn>1861-6410</issn><issn>1861-6429</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kD1PwzAQhi0EoqXwA1hQRgYCvsSOnbGq-JIqscBsGftcUiVxsZ2Bf0-qlI5Md9I97yvdQ8g10HugVDxEAM5kToHnUEiZ1ydkDrKCvGJFfXrcgc7IRYxbShkXJT8ns6IqS8FYOSd3yyH5Tie0WcRNh33SqfF95l2WvjBr-u0Q9rddi9hfkjOn24hXh7kgH0-P76uXfP32_LparnPDgKVcW1NBjXXBnNQCOWdGGGNNLbWTApxBxo2RDjlltHKOaWBUWimtpmjRlAtyO_Xugv8eMCbVNdFg2-oe_RAViEpyLmpRjihMqAk-xoBO7ULT6fCjgKq9JDVJUqMktZek6jFzc6gfPju0x8SflREoJiCOp36DQW39EPrx5X9afwEQt3I0</recordid><startdate>20160301</startdate><enddate>20160301</enddate><creator>Dandin, Ozgür</creator><creator>Teomete, Uygar</creator><creator>Osman, Onur</creator><creator>Tulum, Gökalp</creator><creator>Ergin, Tuncer</creator><creator>Sabuncuoglu, Mehmet Zafer</creator><general>Springer Berlin Heidelberg</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20160301</creationdate><title>Automated segmentation of the injured spleen</title><author>Dandin, Ozgür ; Teomete, Uygar ; Osman, Onur ; Tulum, Gökalp ; Ergin, Tuncer ; Sabuncuoglu, Mehmet Zafer</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c414t-adc619e924f8a7e554c7ccdc98af871fce45cc8fe50406ff4a1408d88da0edec3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2016</creationdate><topic>Abdominal Injuries - diagnostic imaging</topic><topic>Adolescent</topic><topic>Adult</topic><topic>Aged</topic><topic>Computer Imaging</topic><topic>Computer Science</topic><topic>Female</topic><topic>Florida</topic><topic>Health Informatics</topic><topic>Humans</topic><topic>Imaging</topic><topic>Male</topic><topic>Medicine</topic><topic>Medicine &amp; Public Health</topic><topic>Middle Aged</topic><topic>Original Article</topic><topic>Pattern Recognition and Graphics</topic><topic>Radiographic Image Enhancement</topic><topic>Radiographic Image Interpretation, Computer-Assisted</topic><topic>Radiology</topic><topic>Reproducibility of Results</topic><topic>Sensitivity and Specificity</topic><topic>Spleen - diagnostic imaging</topic><topic>Spleen - injuries</topic><topic>Surgery</topic><topic>Tomography, X-Ray Computed - standards</topic><topic>Vision</topic><topic>Young Adult</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Dandin, Ozgür</creatorcontrib><creatorcontrib>Teomete, Uygar</creatorcontrib><creatorcontrib>Osman, Onur</creatorcontrib><creatorcontrib>Tulum, Gökalp</creatorcontrib><creatorcontrib>Ergin, Tuncer</creatorcontrib><creatorcontrib>Sabuncuoglu, Mehmet Zafer</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>International journal for computer assisted radiology and surgery</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Dandin, Ozgür</au><au>Teomete, Uygar</au><au>Osman, Onur</au><au>Tulum, Gökalp</au><au>Ergin, Tuncer</au><au>Sabuncuoglu, Mehmet Zafer</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Automated segmentation of the injured spleen</atitle><jtitle>International journal for computer assisted radiology and surgery</jtitle><stitle>Int J CARS</stitle><addtitle>Int J Comput Assist Radiol Surg</addtitle><date>2016-03-01</date><risdate>2016</risdate><volume>11</volume><issue>3</issue><spage>351</spage><epage>368</epage><pages>351-368</pages><issn>1861-6410</issn><eissn>1861-6429</eissn><abstract>Purpose To develop a novel automated method for segmentation of the injured spleen using morphological properties following abdominal trauma. Average attenuation of a normal spleen in computed tomography (CT) does not vary significantly between subjects. However, in the case of solid organ injury, the shape and attenuation of the spleen on CT may vary depending on the time and severity of the injury. Timely assessment of the severity and extent of the injury is of vital importance in the setting of trauma. Methods We developed an automated computer-aided method for segmenting the injured spleen from CT scans of patients who had splenectomy due to abdominal trauma. We used ten subjects to train our computer-aided diagnosis (CAD) method. To validate the CAD method, we used twenty subjects in our testing group. Probabilistic atlases of the spleens were created using manually segmented data from ten CT scans. The organ location was modeled based on the position of the spleen with respect to the left side of the spine followed by the extraction of shape features. We performed the spleen segmentation in three steps. First, we created a mask of the spleen, and then we used this mask to segment the spleen. The third and final step was the estimation of the spleen edges in the presence of an injury such as laceration or hematoma. Results The traumatized spleens were segmented with a high degree of agreement with the radiologist-drawn contours. The spleen quantification led to 86 ± 5 % volume overlap, 92.5 ± 3.11 % Dice similarity index, 89.05 ± 5.29 % / 96.42 ± 2.55 precision/sensitivity, 8 ± 5 % volume estimation error rate, 1.09 ± 0.62 / 1.91 ± 1.45 mm average surface distance/root-mean-squared error. Conclusions Our CAD method robustly segments the spleen in the presence of morphological changes such as laceration, contusion, pseudoaneurysm, active bleeding, periorgan and parenchymal hematoma, including subcapsular hematoma due to abdominal trauma. CAD of the splenic injury due to abdominal trauma can assist in rapid diagnosis and assessment and guide clinical management. Our segmentation method is a general framework that can be adapted to segment other injured solid abdominal organs.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer Berlin Heidelberg</pub><pmid>26337443</pmid><doi>10.1007/s11548-015-1288-9</doi><tpages>18</tpages></addata></record>
fulltext fulltext
identifier ISSN: 1861-6410
ispartof International journal for computer assisted radiology and surgery, 2016-03, Vol.11 (3), p.351-368
issn 1861-6410
1861-6429
language eng
recordid cdi_proquest_miscellaneous_1768557973
source MEDLINE; Springer Nature - Complete Springer Journals
subjects Abdominal Injuries - diagnostic imaging
Adolescent
Adult
Aged
Computer Imaging
Computer Science
Female
Florida
Health Informatics
Humans
Imaging
Male
Medicine
Medicine & Public Health
Middle Aged
Original Article
Pattern Recognition and Graphics
Radiographic Image Enhancement
Radiographic Image Interpretation, Computer-Assisted
Radiology
Reproducibility of Results
Sensitivity and Specificity
Spleen - diagnostic imaging
Spleen - injuries
Surgery
Tomography, X-Ray Computed - standards
Vision
Young Adult
title Automated segmentation of the injured spleen
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-23T12%3A10%3A25IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Automated%20segmentation%20of%20the%20injured%20spleen&rft.jtitle=International%20journal%20for%20computer%20assisted%20radiology%20and%20surgery&rft.au=Dandin,%20Ozg%C3%BCr&rft.date=2016-03-01&rft.volume=11&rft.issue=3&rft.spage=351&rft.epage=368&rft.pages=351-368&rft.issn=1861-6410&rft.eissn=1861-6429&rft_id=info:doi/10.1007/s11548-015-1288-9&rft_dat=%3Cproquest_cross%3E1768557973%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=1768557973&rft_id=info:pmid/26337443&rfr_iscdi=true