Molecular dynamics simulation investigation of hexanoic acid adsorption onto calcite (101¯4)surface
[Display omitted] •Adsorption of hexanoic acid on calcite (101−4) surface was studied by MD simulation.•Adsorption interaction via H and O atoms has found as a lock and key relation with calcite surface.•Bivariate orientational maps indicate O atom wobbles between two adsorption sites.•Head group an...
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Veröffentlicht in: | Fluid phase equilibria 2015-02, Vol.387, p.24-31 |
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creator | Ghatee, Mohammad Hadi Koleini, Mohammad Mehdi Ayatollahi, Shahab |
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•Adsorption of hexanoic acid on calcite (101−4) surface was studied by MD simulation.•Adsorption interaction via H and O atoms has found as a lock and key relation with calcite surface.•Bivariate orientational maps indicate O atom wobbles between two adsorption sites.•Head group and alkyl-chain atoms diffusion coefficients are the same order of magnitudes.•This adsorption dynamics of hexanoic acid on calcite surface is of considerable interest for industrial applications.
In this paper we report the results of classical molecular dynamics (MD) simulation of hexanoic acid adsorption on calcite (101−4) surface plane using Pavese and AMBER force fields for calcite and hexanoic acid, respectively. Pair correlation function, strictly suggests a well-structured adsorption. Density profile indicates the adsorption occurs through double-bonded O atom of the acid head group by direct interaction with Ca atom at calcite surface. Adsorption orientation of H and double-bonded O atoms was found to be as lock and key with respect to calcite surface Ca and O atoms, facilitating an effective adsorption. Adsorption time evolution indicates that O atom adsorption is accompanied by wobbling between two Ca sites. Hence, in spite of H-bonding by acid group, the surface atoms matrix enforces adsorption with some dynamics. Hexanoic acid molecules adopt a well-defined adsorption layer immediate to the surface patterned by the calcite surface structure. The adsorption energy was estimated to be almost 187 times that of octane, a relevant nonpolar fraction of crude oil. These are useful information on the microscopic behavior and adsorption mechanism of crude oil polar fraction in calcite reservoir. The density profile over simulation time steps is proposed as a practical tool to study the dynamics of adsorbed layer in the same way as the most surface spectroscopic method like surface scattering spectroscopy do but in dynamic mode sub-picosecond scale. The intrinsic orientation of double-bonded O and H atoms of the head-group are presented by bivariate maps which helps establishing the key factors of calcite surface activity. |
doi_str_mv | 10.1016/j.fluid.2014.11.029 |
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•Adsorption of hexanoic acid on calcite (101−4) surface was studied by MD simulation.•Adsorption interaction via H and O atoms has found as a lock and key relation with calcite surface.•Bivariate orientational maps indicate O atom wobbles between two adsorption sites.•Head group and alkyl-chain atoms diffusion coefficients are the same order of magnitudes.•This adsorption dynamics of hexanoic acid on calcite surface is of considerable interest for industrial applications.
In this paper we report the results of classical molecular dynamics (MD) simulation of hexanoic acid adsorption on calcite (101−4) surface plane using Pavese and AMBER force fields for calcite and hexanoic acid, respectively. Pair correlation function, strictly suggests a well-structured adsorption. Density profile indicates the adsorption occurs through double-bonded O atom of the acid head group by direct interaction with Ca atom at calcite surface. Adsorption orientation of H and double-bonded O atoms was found to be as lock and key with respect to calcite surface Ca and O atoms, facilitating an effective adsorption. Adsorption time evolution indicates that O atom adsorption is accompanied by wobbling between two Ca sites. Hence, in spite of H-bonding by acid group, the surface atoms matrix enforces adsorption with some dynamics. Hexanoic acid molecules adopt a well-defined adsorption layer immediate to the surface patterned by the calcite surface structure. The adsorption energy was estimated to be almost 187 times that of octane, a relevant nonpolar fraction of crude oil. These are useful information on the microscopic behavior and adsorption mechanism of crude oil polar fraction in calcite reservoir. The density profile over simulation time steps is proposed as a practical tool to study the dynamics of adsorbed layer in the same way as the most surface spectroscopic method like surface scattering spectroscopy do but in dynamic mode sub-picosecond scale. The intrinsic orientation of double-bonded O and H atoms of the head-group are presented by bivariate maps which helps establishing the key factors of calcite surface activity.</description><identifier>ISSN: 0378-3812</identifier><identifier>EISSN: 1879-0224</identifier><identifier>DOI: 10.1016/j.fluid.2014.11.029</identifier><language>eng</language><publisher>Elsevier B.V</publisher><subject>Adsorption ; Calcite ; Calcite surface ; Density ; Dynamics ; Hexanoic acid ; Hexanoic acid adsorption energy ; Molecular dynamics ; Molecular dynamics simulation ; Orientational bivariate map ; Self-diffusion ; Simulation ; Surface chemistry</subject><ispartof>Fluid phase equilibria, 2015-02, Vol.387, p.24-31</ispartof><rights>2014 Elsevier B.V.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c321t-fccb285011dd786f3d0c3b40a571ae28c52eda75f613c51d12034e10ec744f723</citedby><cites>FETCH-LOGICAL-c321t-fccb285011dd786f3d0c3b40a571ae28c52eda75f613c51d12034e10ec744f723</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.fluid.2014.11.029$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>315,781,785,3551,27929,27930,46000</link.rule.ids></links><search><creatorcontrib>Ghatee, Mohammad Hadi</creatorcontrib><creatorcontrib>Koleini, Mohammad Mehdi</creatorcontrib><creatorcontrib>Ayatollahi, Shahab</creatorcontrib><title>Molecular dynamics simulation investigation of hexanoic acid adsorption onto calcite (101¯4)surface</title><title>Fluid phase equilibria</title><description>[Display omitted]
•Adsorption of hexanoic acid on calcite (101−4) surface was studied by MD simulation.•Adsorption interaction via H and O atoms has found as a lock and key relation with calcite surface.•Bivariate orientational maps indicate O atom wobbles between two adsorption sites.•Head group and alkyl-chain atoms diffusion coefficients are the same order of magnitudes.•This adsorption dynamics of hexanoic acid on calcite surface is of considerable interest for industrial applications.
In this paper we report the results of classical molecular dynamics (MD) simulation of hexanoic acid adsorption on calcite (101−4) surface plane using Pavese and AMBER force fields for calcite and hexanoic acid, respectively. Pair correlation function, strictly suggests a well-structured adsorption. Density profile indicates the adsorption occurs through double-bonded O atom of the acid head group by direct interaction with Ca atom at calcite surface. Adsorption orientation of H and double-bonded O atoms was found to be as lock and key with respect to calcite surface Ca and O atoms, facilitating an effective adsorption. Adsorption time evolution indicates that O atom adsorption is accompanied by wobbling between two Ca sites. Hence, in spite of H-bonding by acid group, the surface atoms matrix enforces adsorption with some dynamics. Hexanoic acid molecules adopt a well-defined adsorption layer immediate to the surface patterned by the calcite surface structure. The adsorption energy was estimated to be almost 187 times that of octane, a relevant nonpolar fraction of crude oil. These are useful information on the microscopic behavior and adsorption mechanism of crude oil polar fraction in calcite reservoir. The density profile over simulation time steps is proposed as a practical tool to study the dynamics of adsorbed layer in the same way as the most surface spectroscopic method like surface scattering spectroscopy do but in dynamic mode sub-picosecond scale. The intrinsic orientation of double-bonded O and H atoms of the head-group are presented by bivariate maps which helps establishing the key factors of calcite surface activity.</description><subject>Adsorption</subject><subject>Calcite</subject><subject>Calcite surface</subject><subject>Density</subject><subject>Dynamics</subject><subject>Hexanoic acid</subject><subject>Hexanoic acid adsorption energy</subject><subject>Molecular dynamics</subject><subject>Molecular dynamics simulation</subject><subject>Orientational bivariate map</subject><subject>Self-diffusion</subject><subject>Simulation</subject><subject>Surface chemistry</subject><issn>0378-3812</issn><issn>1879-0224</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><recordid>eNqFkLtOxTAMhiMEEofLE7B0hKElTtqmHRgQ4iaBWGCOguNAjnqaQ9IieCregSejUGYYLMv2_1v2x9gB8AI41MfLwnWjt4XgUBYABRftBltAo9qcC1FusgWXqsllA2Kb7aS05JxDVYsFs7ehIxw7EzP73puVx5Qlv5oagw995vtXSoN_mqvgsmd6M33wmBn0NjM2hbieZ_0QMjQd-oGyw-mqz4_yKI3RGaQ9tuVMl2j_N--yh4vz-7Or_Obu8vrs9CZHKWDIHeKjaCoOYK1qaictR_lYclMpMCQarARZoypXg8QKLAguSwJOqMrSKSF32eG8dx3Dyzgdrlc-IXWd6SmMSYOqq7aeovpfWivVCoC2nqRylmIMKUVyeh39ysR3DVx_49dL_YNff-PXAHrCP7lOZhdND796ijqhpx7J-kg4aBv8n_4vgLuQNA</recordid><startdate>20150201</startdate><enddate>20150201</enddate><creator>Ghatee, Mohammad Hadi</creator><creator>Koleini, Mohammad Mehdi</creator><creator>Ayatollahi, Shahab</creator><general>Elsevier B.V</general><scope>AAYXX</scope><scope>CITATION</scope><scope>7SC</scope><scope>7U5</scope><scope>8FD</scope><scope>JQ2</scope><scope>L7M</scope><scope>L~C</scope><scope>L~D</scope><scope>7UA</scope><scope>C1K</scope><scope>F1W</scope><scope>H96</scope><scope>L.G</scope></search><sort><creationdate>20150201</creationdate><title>Molecular dynamics simulation investigation of hexanoic acid adsorption onto calcite (101¯4)surface</title><author>Ghatee, Mohammad Hadi ; Koleini, Mohammad Mehdi ; Ayatollahi, Shahab</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c321t-fccb285011dd786f3d0c3b40a571ae28c52eda75f613c51d12034e10ec744f723</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>Adsorption</topic><topic>Calcite</topic><topic>Calcite surface</topic><topic>Density</topic><topic>Dynamics</topic><topic>Hexanoic acid</topic><topic>Hexanoic acid adsorption energy</topic><topic>Molecular dynamics</topic><topic>Molecular dynamics simulation</topic><topic>Orientational bivariate map</topic><topic>Self-diffusion</topic><topic>Simulation</topic><topic>Surface chemistry</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ghatee, Mohammad Hadi</creatorcontrib><creatorcontrib>Koleini, Mohammad Mehdi</creatorcontrib><creatorcontrib>Ayatollahi, Shahab</creatorcontrib><collection>CrossRef</collection><collection>Computer and Information Systems Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>Technology Research Database</collection><collection>ProQuest Computer Science Collection</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>Computer and Information Systems Abstracts Academic</collection><collection>Computer and Information Systems Abstracts Professional</collection><collection>Water Resources Abstracts</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 2: Ocean Technology, Policy & Non-Living Resources</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><jtitle>Fluid phase equilibria</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ghatee, Mohammad Hadi</au><au>Koleini, Mohammad Mehdi</au><au>Ayatollahi, Shahab</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Molecular dynamics simulation investigation of hexanoic acid adsorption onto calcite (101¯4)surface</atitle><jtitle>Fluid phase equilibria</jtitle><date>2015-02-01</date><risdate>2015</risdate><volume>387</volume><spage>24</spage><epage>31</epage><pages>24-31</pages><issn>0378-3812</issn><eissn>1879-0224</eissn><abstract>[Display omitted]
•Adsorption of hexanoic acid on calcite (101−4) surface was studied by MD simulation.•Adsorption interaction via H and O atoms has found as a lock and key relation with calcite surface.•Bivariate orientational maps indicate O atom wobbles between two adsorption sites.•Head group and alkyl-chain atoms diffusion coefficients are the same order of magnitudes.•This adsorption dynamics of hexanoic acid on calcite surface is of considerable interest for industrial applications.
In this paper we report the results of classical molecular dynamics (MD) simulation of hexanoic acid adsorption on calcite (101−4) surface plane using Pavese and AMBER force fields for calcite and hexanoic acid, respectively. Pair correlation function, strictly suggests a well-structured adsorption. Density profile indicates the adsorption occurs through double-bonded O atom of the acid head group by direct interaction with Ca atom at calcite surface. Adsorption orientation of H and double-bonded O atoms was found to be as lock and key with respect to calcite surface Ca and O atoms, facilitating an effective adsorption. Adsorption time evolution indicates that O atom adsorption is accompanied by wobbling between two Ca sites. Hence, in spite of H-bonding by acid group, the surface atoms matrix enforces adsorption with some dynamics. Hexanoic acid molecules adopt a well-defined adsorption layer immediate to the surface patterned by the calcite surface structure. The adsorption energy was estimated to be almost 187 times that of octane, a relevant nonpolar fraction of crude oil. These are useful information on the microscopic behavior and adsorption mechanism of crude oil polar fraction in calcite reservoir. The density profile over simulation time steps is proposed as a practical tool to study the dynamics of adsorbed layer in the same way as the most surface spectroscopic method like surface scattering spectroscopy do but in dynamic mode sub-picosecond scale. The intrinsic orientation of double-bonded O and H atoms of the head-group are presented by bivariate maps which helps establishing the key factors of calcite surface activity.</abstract><pub>Elsevier B.V</pub><doi>10.1016/j.fluid.2014.11.029</doi><tpages>8</tpages></addata></record> |
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subjects | Adsorption Calcite Calcite surface Density Dynamics Hexanoic acid Hexanoic acid adsorption energy Molecular dynamics Molecular dynamics simulation Orientational bivariate map Self-diffusion Simulation Surface chemistry |
title | Molecular dynamics simulation investigation of hexanoic acid adsorption onto calcite (101¯4)surface |
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