Secretory expression, characterization and docking study of glucose-tolerant β-glucosidase from B. subtilis

The thermostable, glucose tolerant β-glucosidase gene (bgl) of Glycoside hydrolase family 1, isolated from Bacillus subtilis, was cloned and overexpressed in Escherichia coli. The bgl has open reading frame of 1407bp, encoding 469 amino acids with predicted molecular weight of 53kDa. The recombinant...

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Veröffentlicht in:International journal of biological macromolecules 2016-04, Vol.85, p.425-433
Hauptverfasser: Chamoli, Shivangi, Kumar, Piyush, Navani, Naveen Kumar, Verma, Ashok Kumar
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Navani, Naveen Kumar
Verma, Ashok Kumar
description The thermostable, glucose tolerant β-glucosidase gene (bgl) of Glycoside hydrolase family 1, isolated from Bacillus subtilis, was cloned and overexpressed in Escherichia coli. The bgl has open reading frame of 1407bp, encoding 469 amino acids with predicted molecular weight of 53kDa. The recombinant protein (BGL) was purified 10.76 fold to homogeneity with specific activity of 54.04U/mg and recovery of 38.67%. The purified BGL was optimally active at pH 6.0 and temperature 60°C. The enzyme retained more than 85% of maximum activity after 1h preincubation at 60°C. The kinetic analysis indicated that BGL has highest catalytic efficiency (Kcat/Km) against p-nitrophenyl-β-d-xylopyranoside (654.58mM−1s−1) followed by p-nitrophenyl-β-d-glucopyranoside (292.53mM−1s−1) and p-nitrophenyl-β-d-galactopyranoside (61.17mM−1s−1). The Ki value for glucose and δ-gluconolactone was determined to be 1.9mM and 0.018mM, respectively. The BGL exhibited high tolerance against detergents and organic solvents. The homology modeling revealed that protein has 19 α-helices and 4 β-sheets and adopted (α/β)8 TIM barrel structure. Substrate docking and LigPlot analysis depicted the amino acids of active site involved in hydrogen bonding and hydrophobic interactions with substrates. The efficient BGL secretion with exploration of structural and functional relationship offer vistas for large scale production and various industrial applications.
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purification</subject><subject>Recombinant Proteins - metabolism</subject><subject>Sequence Alignment</subject><subject>Sequence Analysis, DNA</subject><subject>Substrate Specificity</subject><subject>Temperature</subject><subject>Thermostable-glucose tolerant β-glucosidase</subject><issn>0141-8130</issn><issn>1879-0003</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2016</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkMFu1DAQhi1ERbeFV6h85EDCTLLrJDeggoJUqQfgbDnjSfGSxIvtVCyP1QfpM-HVtlw5jebX_8-v-YS4QCgRUL3dlm7bOz8ZKqu8l4AlAD4TK2ybrgCA-rlYAa6xaLGGU3EW4zaraoPtC3FaqaapugpWYvzKFDj5sJf8exc4RufnN5J-mGAocXB_TMqKNLOV1tNPN9_KmBa7l36Qt-NCPnKR_MjBzEk-3BdHzVkTWQ7BT_JDKePSJze6-FKcDGaM_Opxnovvnz5-u_xcXN9cfbl8f11QrdpUNKyg6S1axHpgVLSGQZGFShHCuiPsMgLLQ8ebvuOhB6C-Iltv2k1DXdXW5-L18e4u-F8Lx6QnF4nH0czsl6ixyRygU3iwqqOVgo8x8KB3wU0m7DWCPpDWW_1EWh9Ia0CdSefgxWPH0k9s_8We0GbDu6OB86d3joOO5Hgmti4wJW29-1_HX-iUlVs</recordid><startdate>201604</startdate><enddate>201604</enddate><creator>Chamoli, Shivangi</creator><creator>Kumar, Piyush</creator><creator>Navani, Naveen Kumar</creator><creator>Verma, Ashok Kumar</creator><general>Elsevier B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>201604</creationdate><title>Secretory expression, characterization and docking study of glucose-tolerant β-glucosidase from B. subtilis</title><author>Chamoli, Shivangi ; 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purification</topic><topic>Recombinant Proteins - metabolism</topic><topic>Sequence Alignment</topic><topic>Sequence Analysis, DNA</topic><topic>Substrate Specificity</topic><topic>Temperature</topic><topic>Thermostable-glucose tolerant β-glucosidase</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Chamoli, Shivangi</creatorcontrib><creatorcontrib>Kumar, Piyush</creatorcontrib><creatorcontrib>Navani, Naveen Kumar</creatorcontrib><creatorcontrib>Verma, Ashok Kumar</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>International journal of biological macromolecules</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Chamoli, Shivangi</au><au>Kumar, Piyush</au><au>Navani, Naveen Kumar</au><au>Verma, Ashok Kumar</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Secretory expression, characterization and docking study of glucose-tolerant β-glucosidase from B. subtilis</atitle><jtitle>International journal of biological macromolecules</jtitle><addtitle>Int J Biol Macromol</addtitle><date>2016-04</date><risdate>2016</risdate><volume>85</volume><spage>425</spage><epage>433</epage><pages>425-433</pages><issn>0141-8130</issn><eissn>1879-0003</eissn><abstract>The thermostable, glucose tolerant β-glucosidase gene (bgl) of Glycoside hydrolase family 1, isolated from Bacillus subtilis, was cloned and overexpressed in Escherichia coli. 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subjects Amino Acid Sequence
Bacillus subtilis - enzymology
Bacillus subtilis - genetics
Bacillus subtilis - metabolism
beta-Glucosidase - chemistry
beta-Glucosidase - genetics
beta-Glucosidase - isolation & purification
beta-Glucosidase - metabolism
Cloning, Molecular
Enzyme Activation
Enzyme Stability
Extracellular expression
Glucose - chemistry
Glucose - metabolism
Hydrogen-Ion Concentration
Molecular docking
Molecular Docking Simulation
Molecular Sequence Data
Recombinant Proteins - chemistry
Recombinant Proteins - genetics
Recombinant Proteins - isolation & purification
Recombinant Proteins - metabolism
Sequence Alignment
Sequence Analysis, DNA
Substrate Specificity
Temperature
Thermostable-glucose tolerant β-glucosidase
title Secretory expression, characterization and docking study of glucose-tolerant β-glucosidase from B. subtilis
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