Transcriptome analysis of neuropeptides and G-protein coupled receptors (GPCRs) for neuropeptides in the brown planthopper Nilaparvata lugens
•Transcriptome analysis (RNA-seq) revealed that the brown planthopper Nilaparvata lugens possesses the most comprehensive neuropeptide system yet found in insects.•The gene coding for prothoracicotropic hormone (PTTH) is first identified in hemimetabolous insects.•New type of insect GPCRs such as th...
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creator | Tanaka, Yoshiaki Suetsugu, Yoshitaka Yamamoto, Kimiko Noda, Hiroaki Shinoda, Tetsuro |
description | •Transcriptome analysis (RNA-seq) revealed that the brown planthopper Nilaparvata lugens possesses the most comprehensive neuropeptide system yet found in insects.•The gene coding for prothoracicotropic hormone (PTTH) is first identified in hemimetabolous insects.•New type of insect GPCRs such as thyrotropin-releasing hormone receptor-like (TRHRL) is identified from N. lugens.•Our findings demonstrate the power of RNA-seq as a tool for analyzing the neuropeptide-related genes in the absence of whole genome sequence information.
The genes encoding neuropeptides, neurohormones and their putative G-protein coupled receptors were identified in the brown planthopper (BPH), Nilaparvata lugens (Stål) by transcriptome analysis (RNA-seq). Forty-eight candidate genes were found to encode neuropeptides or peptide hormones. These include all known insect neuropeptides and neurohormones, with the exception of neuropeptide-like precursor 2 (NPLP2) and trissin. The gene coding for prothoracicotropic hormone (PTTH) was first identified from hemimetabolous insect. A total of 57 putative neuropeptide GPCR genes were identified and phylogenetic analysis showed most of them to be closely related to insect GPCRs. A notable finding was the occurrence of vertebrate hormone receptors, thyrotropin-releasing hormone receptor (TRHR)-like GPCR and parathyroid hormone receptor (PTHR)-like GPCRs. These results suggest that N. lugens possesses the most comprehensive neuropeptide system yet found in insects. Moreover, our findings demonstrate the power of RNA-seq as a tool for analyzing the neuropeptide-related genes in the absence of whole genome sequence information. |
doi_str_mv | 10.1016/j.peptides.2013.07.027 |
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The genes encoding neuropeptides, neurohormones and their putative G-protein coupled receptors were identified in the brown planthopper (BPH), Nilaparvata lugens (Stål) by transcriptome analysis (RNA-seq). Forty-eight candidate genes were found to encode neuropeptides or peptide hormones. These include all known insect neuropeptides and neurohormones, with the exception of neuropeptide-like precursor 2 (NPLP2) and trissin. The gene coding for prothoracicotropic hormone (PTTH) was first identified from hemimetabolous insect. A total of 57 putative neuropeptide GPCR genes were identified and phylogenetic analysis showed most of them to be closely related to insect GPCRs. A notable finding was the occurrence of vertebrate hormone receptors, thyrotropin-releasing hormone receptor (TRHR)-like GPCR and parathyroid hormone receptor (PTHR)-like GPCRs. These results suggest that N. lugens possesses the most comprehensive neuropeptide system yet found in insects. Moreover, our findings demonstrate the power of RNA-seq as a tool for analyzing the neuropeptide-related genes in the absence of whole genome sequence information.</description><identifier>ISSN: 0196-9781</identifier><identifier>EISSN: 1873-5169</identifier><identifier>DOI: 10.1016/j.peptides.2013.07.027</identifier><identifier>PMID: 23932938</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Animals ; G-protein coupled receptor (GPCR) ; Genes ; Hemiptera - genetics ; Hormones ; Insect Hormones - genetics ; Insect Proteins - genetics ; Insects ; Neuropeptide ; Neuropeptides - classification ; Neuropeptides - genetics ; Nilaparvata lugens ; Parathyroid hormone receptor (PTHR) ; Peptides ; Phylogeny ; Precursors ; Prothoracicotropic hormone (PTTH) ; Receptors ; Receptors, G-Protein-Coupled - classification ; Receptors, G-Protein-Coupled - genetics ; Thyrotropin-releasing hormone receptor (TRHR) ; Vertebrates</subject><ispartof>Peptides (New York, N.Y. : 1980), 2014-03, Vol.53, p.125-133</ispartof><rights>2013 Elsevier Inc.</rights><rights>Copyright © 2013 Elsevier Inc. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c500t-7149cbee4611160a53a001e8fc0b78661e34babff923dd4e8a0cd51fe99e8d683</citedby><cites>FETCH-LOGICAL-c500t-7149cbee4611160a53a001e8fc0b78661e34babff923dd4e8a0cd51fe99e8d683</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.peptides.2013.07.027$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>315,781,785,3551,27929,27930,46000</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23932938$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Tanaka, Yoshiaki</creatorcontrib><creatorcontrib>Suetsugu, Yoshitaka</creatorcontrib><creatorcontrib>Yamamoto, Kimiko</creatorcontrib><creatorcontrib>Noda, Hiroaki</creatorcontrib><creatorcontrib>Shinoda, Tetsuro</creatorcontrib><title>Transcriptome analysis of neuropeptides and G-protein coupled receptors (GPCRs) for neuropeptides in the brown planthopper Nilaparvata lugens</title><title>Peptides (New York, N.Y. : 1980)</title><addtitle>Peptides</addtitle><description>•Transcriptome analysis (RNA-seq) revealed that the brown planthopper Nilaparvata lugens possesses the most comprehensive neuropeptide system yet found in insects.•The gene coding for prothoracicotropic hormone (PTTH) is first identified in hemimetabolous insects.•New type of insect GPCRs such as thyrotropin-releasing hormone receptor-like (TRHRL) is identified from N. lugens.•Our findings demonstrate the power of RNA-seq as a tool for analyzing the neuropeptide-related genes in the absence of whole genome sequence information.
The genes encoding neuropeptides, neurohormones and their putative G-protein coupled receptors were identified in the brown planthopper (BPH), Nilaparvata lugens (Stål) by transcriptome analysis (RNA-seq). Forty-eight candidate genes were found to encode neuropeptides or peptide hormones. These include all known insect neuropeptides and neurohormones, with the exception of neuropeptide-like precursor 2 (NPLP2) and trissin. The gene coding for prothoracicotropic hormone (PTTH) was first identified from hemimetabolous insect. A total of 57 putative neuropeptide GPCR genes were identified and phylogenetic analysis showed most of them to be closely related to insect GPCRs. A notable finding was the occurrence of vertebrate hormone receptors, thyrotropin-releasing hormone receptor (TRHR)-like GPCR and parathyroid hormone receptor (PTHR)-like GPCRs. These results suggest that N. lugens possesses the most comprehensive neuropeptide system yet found in insects. Moreover, our findings demonstrate the power of RNA-seq as a tool for analyzing the neuropeptide-related genes in the absence of whole genome sequence information.</description><subject>Animals</subject><subject>G-protein coupled receptor (GPCR)</subject><subject>Genes</subject><subject>Hemiptera - genetics</subject><subject>Hormones</subject><subject>Insect Hormones - genetics</subject><subject>Insect Proteins - genetics</subject><subject>Insects</subject><subject>Neuropeptide</subject><subject>Neuropeptides - classification</subject><subject>Neuropeptides - genetics</subject><subject>Nilaparvata lugens</subject><subject>Parathyroid hormone receptor (PTHR)</subject><subject>Peptides</subject><subject>Phylogeny</subject><subject>Precursors</subject><subject>Prothoracicotropic hormone (PTTH)</subject><subject>Receptors</subject><subject>Receptors, G-Protein-Coupled - classification</subject><subject>Receptors, G-Protein-Coupled - genetics</subject><subject>Thyrotropin-releasing hormone receptor (TRHR)</subject><subject>Vertebrates</subject><issn>0196-9781</issn><issn>1873-5169</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNkcFu1DAURS0EokPhFyovyyLh2U6ceAcawYBUAUJlbTn2C_UoExs7KepH8M-4mg4LNmXlhc99z76HkAsGNQMm3-zriHHxDnPNgYkauhp494RsWN-JqmVSPSUbYEpWquvZGXmR8x4Amkb1z8kZF0pwJfoN-X2dzJxt8nEJB6RmNtNd9pmGkc64pnDaUm4c3VUxhQX9TG1Y44SOJrQFCCnTy93X7bf8mo4h_ZMs-HKDdEjh10zjZOblJsSIiX72k4km3ZrF0Gn9gXN-SZ6NZsr46uE8J98_vL_efqyuvuw-bd9dVbYFWKqONcoOiI1kjEkwrTAADPvRwtD1UjIUzWCGcVRcONdgb8C6lo2oFPZO9uKcXB7nlv_8XDEv-uCzxak8DsOaNeskZw0vFT2Otg1w0XL4j6lFS8eZUrKg8ojaFHJOOOqY_MGkO81A3wvWe30qUN8L1tDpIrgELx52rMMB3d_YyWgB3h4BLP3dekw6W4-zReeLrEW74B_b8Qeoy71I</recordid><startdate>20140301</startdate><enddate>20140301</enddate><creator>Tanaka, Yoshiaki</creator><creator>Suetsugu, Yoshitaka</creator><creator>Yamamoto, Kimiko</creator><creator>Noda, Hiroaki</creator><creator>Shinoda, Tetsuro</creator><general>Elsevier Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7SS</scope><scope>7TK</scope><scope>7U5</scope><scope>8FD</scope><scope>L7M</scope></search><sort><creationdate>20140301</creationdate><title>Transcriptome analysis of neuropeptides and G-protein coupled receptors (GPCRs) for neuropeptides in the brown planthopper Nilaparvata lugens</title><author>Tanaka, Yoshiaki ; Suetsugu, Yoshitaka ; Yamamoto, Kimiko ; Noda, Hiroaki ; Shinoda, Tetsuro</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c500t-7149cbee4611160a53a001e8fc0b78661e34babff923dd4e8a0cd51fe99e8d683</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>Animals</topic><topic>G-protein coupled receptor (GPCR)</topic><topic>Genes</topic><topic>Hemiptera - genetics</topic><topic>Hormones</topic><topic>Insect Hormones - genetics</topic><topic>Insect Proteins - genetics</topic><topic>Insects</topic><topic>Neuropeptide</topic><topic>Neuropeptides - classification</topic><topic>Neuropeptides - genetics</topic><topic>Nilaparvata lugens</topic><topic>Parathyroid hormone receptor (PTHR)</topic><topic>Peptides</topic><topic>Phylogeny</topic><topic>Precursors</topic><topic>Prothoracicotropic hormone (PTTH)</topic><topic>Receptors</topic><topic>Receptors, G-Protein-Coupled - classification</topic><topic>Receptors, G-Protein-Coupled - genetics</topic><topic>Thyrotropin-releasing hormone receptor (TRHR)</topic><topic>Vertebrates</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Tanaka, Yoshiaki</creatorcontrib><creatorcontrib>Suetsugu, Yoshitaka</creatorcontrib><creatorcontrib>Yamamoto, Kimiko</creatorcontrib><creatorcontrib>Noda, Hiroaki</creatorcontrib><creatorcontrib>Shinoda, Tetsuro</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Neurosciences Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>Technology Research Database</collection><collection>Advanced Technologies Database with Aerospace</collection><jtitle>Peptides (New York, N.Y. : 1980)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Tanaka, Yoshiaki</au><au>Suetsugu, Yoshitaka</au><au>Yamamoto, Kimiko</au><au>Noda, Hiroaki</au><au>Shinoda, Tetsuro</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Transcriptome analysis of neuropeptides and G-protein coupled receptors (GPCRs) for neuropeptides in the brown planthopper Nilaparvata lugens</atitle><jtitle>Peptides (New York, N.Y. : 1980)</jtitle><addtitle>Peptides</addtitle><date>2014-03-01</date><risdate>2014</risdate><volume>53</volume><spage>125</spage><epage>133</epage><pages>125-133</pages><issn>0196-9781</issn><eissn>1873-5169</eissn><abstract>•Transcriptome analysis (RNA-seq) revealed that the brown planthopper Nilaparvata lugens possesses the most comprehensive neuropeptide system yet found in insects.•The gene coding for prothoracicotropic hormone (PTTH) is first identified in hemimetabolous insects.•New type of insect GPCRs such as thyrotropin-releasing hormone receptor-like (TRHRL) is identified from N. lugens.•Our findings demonstrate the power of RNA-seq as a tool for analyzing the neuropeptide-related genes in the absence of whole genome sequence information.
The genes encoding neuropeptides, neurohormones and their putative G-protein coupled receptors were identified in the brown planthopper (BPH), Nilaparvata lugens (Stål) by transcriptome analysis (RNA-seq). Forty-eight candidate genes were found to encode neuropeptides or peptide hormones. These include all known insect neuropeptides and neurohormones, with the exception of neuropeptide-like precursor 2 (NPLP2) and trissin. The gene coding for prothoracicotropic hormone (PTTH) was first identified from hemimetabolous insect. A total of 57 putative neuropeptide GPCR genes were identified and phylogenetic analysis showed most of them to be closely related to insect GPCRs. A notable finding was the occurrence of vertebrate hormone receptors, thyrotropin-releasing hormone receptor (TRHR)-like GPCR and parathyroid hormone receptor (PTHR)-like GPCRs. These results suggest that N. lugens possesses the most comprehensive neuropeptide system yet found in insects. Moreover, our findings demonstrate the power of RNA-seq as a tool for analyzing the neuropeptide-related genes in the absence of whole genome sequence information.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>23932938</pmid><doi>10.1016/j.peptides.2013.07.027</doi><tpages>9</tpages></addata></record> |
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subjects | Animals G-protein coupled receptor (GPCR) Genes Hemiptera - genetics Hormones Insect Hormones - genetics Insect Proteins - genetics Insects Neuropeptide Neuropeptides - classification Neuropeptides - genetics Nilaparvata lugens Parathyroid hormone receptor (PTHR) Peptides Phylogeny Precursors Prothoracicotropic hormone (PTTH) Receptors Receptors, G-Protein-Coupled - classification Receptors, G-Protein-Coupled - genetics Thyrotropin-releasing hormone receptor (TRHR) Vertebrates |
title | Transcriptome analysis of neuropeptides and G-protein coupled receptors (GPCRs) for neuropeptides in the brown planthopper Nilaparvata lugens |
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