Croceitalea litorea sp. nov., isolated from seashore sand
Strain CBA3205T is a Gram-stain-negative, non-motile and rod-shaped bacterium that was isolated from the seashore sand of Jeju Island in South Korea. Based on the phylogenetic analysis, the most closed related species was Croceitalea eckloniae DOKDO 025T, with 94.8 % sequence similarity for the 16S...
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| Veröffentlicht in: | International journal of systematic and evolutionary microbiology 2015-12, Vol.65 (12), p.4563-4567 |
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| container_title | International journal of systematic and evolutionary microbiology |
| container_volume | 65 |
| creator | Kim, Minwook Cha, In-Tae Lee, Hae Won Yim, Kyung June Song, Hye Seon Hyun, Dong-Wook Bae, Jin-Woo Roh, Seong Woon Lee, Sung-Jae |
| description | Strain CBA3205T is a Gram-stain-negative, non-motile and rod-shaped bacterium that was isolated from the seashore sand of Jeju Island in South Korea. Based on the phylogenetic analysis, the most closed related species was Croceitalea eckloniae DOKDO 025T, with 94.8 % sequence similarity for the 16S rRNA gene. Strain CBA3205T was observed to grow optimally at 25-30 °C and at pH 8.5 in the presence of 2-3 % (w/v) NaCl. The major fatty acids of strain CBA3205T were iso-C15 : 0, iso-C15 : 1 G, and iso-C17 : 0 3-OH. The major respiratory quinone was MK-6 and the major polar lipids were two unidentified amino-group-containing phospholipids and an unidentified polar lipid. The G+C content of the genomic DNA of strain CBA3205T was 62.5 mol%. Based on the phenotypic, genotypic and phylogenetic analyses, strain CBA3205T was considered to be a novel species belonging to the genus Croceitalea within the family Flavobacteriaceae, for which the name Croceitalea litorea sp. nov. is proposed. The type strain is CBA3205T ( = KACC 17669T = JCM 19531T). |
| doi_str_mv | 10.1099/ijsem.0.000613 |
| format | Article |
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Based on the phylogenetic analysis, the most closed related species was Croceitalea eckloniae DOKDO 025T, with 94.8 % sequence similarity for the 16S rRNA gene. Strain CBA3205T was observed to grow optimally at 25-30 °C and at pH 8.5 in the presence of 2-3 % (w/v) NaCl. The major fatty acids of strain CBA3205T were iso-C15 : 0, iso-C15 : 1 G, and iso-C17 : 0 3-OH. The major respiratory quinone was MK-6 and the major polar lipids were two unidentified amino-group-containing phospholipids and an unidentified polar lipid. The G+C content of the genomic DNA of strain CBA3205T was 62.5 mol%. Based on the phenotypic, genotypic and phylogenetic analyses, strain CBA3205T was considered to be a novel species belonging to the genus Croceitalea within the family Flavobacteriaceae, for which the name Croceitalea litorea sp. nov. is proposed. The type strain is CBA3205T ( = KACC 17669T = JCM 19531T).</description><identifier>ISSN: 1466-5026</identifier><identifier>EISSN: 1466-5034</identifier><identifier>DOI: 10.1099/ijsem.0.000613</identifier><identifier>PMID: 26373987</identifier><language>eng</language><publisher>England</publisher><subject>Bacterial Typing Techniques ; Base Composition ; DNA, Bacterial - genetics ; Fatty Acids - chemistry ; Flavobacteriaceae - classification ; Flavobacteriaceae - genetics ; Flavobacteriaceae - isolation & purification ; Molecular Sequence Data ; Phospholipids - chemistry ; Phylogeny ; Pigmentation ; Republic of Korea ; RNA, Ribosomal, 16S - genetics ; Seawater - microbiology ; Sequence Analysis, DNA ; Silicon Dioxide ; Vitamin K 2 - analogs & derivatives ; Vitamin K 2 - chemistry</subject><ispartof>International journal of systematic and evolutionary microbiology, 2015-12, Vol.65 (12), p.4563-4567</ispartof><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c335t-7cf600cce77d1a559e57a8f9179ba2770fa56f1e03eccfb34fe9b34a9b86ddb93</citedby><cites>FETCH-LOGICAL-c335t-7cf600cce77d1a559e57a8f9179ba2770fa56f1e03eccfb34fe9b34a9b86ddb93</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,3744,27922,27923</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/26373987$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Kim, Minwook</creatorcontrib><creatorcontrib>Cha, In-Tae</creatorcontrib><creatorcontrib>Lee, Hae Won</creatorcontrib><creatorcontrib>Yim, Kyung June</creatorcontrib><creatorcontrib>Song, Hye Seon</creatorcontrib><creatorcontrib>Hyun, Dong-Wook</creatorcontrib><creatorcontrib>Bae, Jin-Woo</creatorcontrib><creatorcontrib>Roh, Seong Woon</creatorcontrib><creatorcontrib>Lee, Sung-Jae</creatorcontrib><title>Croceitalea litorea sp. nov., isolated from seashore sand</title><title>International journal of systematic and evolutionary microbiology</title><addtitle>Int J Syst Evol Microbiol</addtitle><description>Strain CBA3205T is a Gram-stain-negative, non-motile and rod-shaped bacterium that was isolated from the seashore sand of Jeju Island in South Korea. Based on the phylogenetic analysis, the most closed related species was Croceitalea eckloniae DOKDO 025T, with 94.8 % sequence similarity for the 16S rRNA gene. Strain CBA3205T was observed to grow optimally at 25-30 °C and at pH 8.5 in the presence of 2-3 % (w/v) NaCl. The major fatty acids of strain CBA3205T were iso-C15 : 0, iso-C15 : 1 G, and iso-C17 : 0 3-OH. The major respiratory quinone was MK-6 and the major polar lipids were two unidentified amino-group-containing phospholipids and an unidentified polar lipid. The G+C content of the genomic DNA of strain CBA3205T was 62.5 mol%. Based on the phenotypic, genotypic and phylogenetic analyses, strain CBA3205T was considered to be a novel species belonging to the genus Croceitalea within the family Flavobacteriaceae, for which the name Croceitalea litorea sp. nov. is proposed. The type strain is CBA3205T ( = KACC 17669T = JCM 19531T).</description><subject>Bacterial Typing Techniques</subject><subject>Base Composition</subject><subject>DNA, Bacterial - genetics</subject><subject>Fatty Acids - chemistry</subject><subject>Flavobacteriaceae - classification</subject><subject>Flavobacteriaceae - genetics</subject><subject>Flavobacteriaceae - isolation & purification</subject><subject>Molecular Sequence Data</subject><subject>Phospholipids - chemistry</subject><subject>Phylogeny</subject><subject>Pigmentation</subject><subject>Republic of Korea</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>Seawater - microbiology</subject><subject>Sequence Analysis, DNA</subject><subject>Silicon Dioxide</subject><subject>Vitamin K 2 - analogs & derivatives</subject><subject>Vitamin K 2 - chemistry</subject><issn>1466-5026</issn><issn>1466-5034</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNo9kE1PwzAMhiMEYmNw5Yh65ECLs6xJc0TT-JAmcYFzlKaO6NQuI26R-PcENnbxa1mPbelh7JpDwUHr-3ZD2BdQAIDk4oRN-ULKvASxOD32czlhF0QbgDQAOGeTuRRK6EpNmV7G4LAdbIc269ohxJS0K7Jt-CruspZCZwdsMh9DnxFa-khERnbbXLIzbzvCq0PO2Pvj6m35nK9fn16WD-vcCVEOuXI-_XQOlWq4LUuNpbKV11zp2s6VAm9L6TmCQOd8LRYedapW15VsmlqLGbvd393F8DkiDaZvyWHX2S2GkQxXEiqtKikSWuxRFwNRRG92se1t_DYczK8u86fLgNnrSgs3h9tj3WNzxP_9iB8zOmZ7</recordid><startdate>201512</startdate><enddate>201512</enddate><creator>Kim, Minwook</creator><creator>Cha, In-Tae</creator><creator>Lee, Hae Won</creator><creator>Yim, Kyung June</creator><creator>Song, Hye Seon</creator><creator>Hyun, Dong-Wook</creator><creator>Bae, Jin-Woo</creator><creator>Roh, Seong Woon</creator><creator>Lee, Sung-Jae</creator><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>201512</creationdate><title>Croceitalea litorea sp. nov., isolated from seashore sand</title><author>Kim, Minwook ; Cha, In-Tae ; Lee, Hae Won ; Yim, Kyung June ; Song, Hye Seon ; Hyun, Dong-Wook ; Bae, Jin-Woo ; Roh, Seong Woon ; Lee, Sung-Jae</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c335t-7cf600cce77d1a559e57a8f9179ba2770fa56f1e03eccfb34fe9b34a9b86ddb93</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>Bacterial Typing Techniques</topic><topic>Base Composition</topic><topic>DNA, Bacterial - genetics</topic><topic>Fatty Acids - chemistry</topic><topic>Flavobacteriaceae - classification</topic><topic>Flavobacteriaceae - genetics</topic><topic>Flavobacteriaceae - isolation & purification</topic><topic>Molecular Sequence Data</topic><topic>Phospholipids - chemistry</topic><topic>Phylogeny</topic><topic>Pigmentation</topic><topic>Republic of Korea</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>Seawater - microbiology</topic><topic>Sequence Analysis, DNA</topic><topic>Silicon Dioxide</topic><topic>Vitamin K 2 - analogs & derivatives</topic><topic>Vitamin K 2 - chemistry</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kim, Minwook</creatorcontrib><creatorcontrib>Cha, In-Tae</creatorcontrib><creatorcontrib>Lee, Hae Won</creatorcontrib><creatorcontrib>Yim, Kyung June</creatorcontrib><creatorcontrib>Song, Hye Seon</creatorcontrib><creatorcontrib>Hyun, Dong-Wook</creatorcontrib><creatorcontrib>Bae, Jin-Woo</creatorcontrib><creatorcontrib>Roh, Seong Woon</creatorcontrib><creatorcontrib>Lee, Sung-Jae</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>International journal of systematic and evolutionary microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kim, Minwook</au><au>Cha, In-Tae</au><au>Lee, Hae Won</au><au>Yim, Kyung June</au><au>Song, Hye Seon</au><au>Hyun, Dong-Wook</au><au>Bae, Jin-Woo</au><au>Roh, Seong Woon</au><au>Lee, Sung-Jae</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Croceitalea litorea sp. nov., isolated from seashore sand</atitle><jtitle>International journal of systematic and evolutionary microbiology</jtitle><addtitle>Int J Syst Evol Microbiol</addtitle><date>2015-12</date><risdate>2015</risdate><volume>65</volume><issue>12</issue><spage>4563</spage><epage>4567</epage><pages>4563-4567</pages><issn>1466-5026</issn><eissn>1466-5034</eissn><abstract>Strain CBA3205T is a Gram-stain-negative, non-motile and rod-shaped bacterium that was isolated from the seashore sand of Jeju Island in South Korea. Based on the phylogenetic analysis, the most closed related species was Croceitalea eckloniae DOKDO 025T, with 94.8 % sequence similarity for the 16S rRNA gene. Strain CBA3205T was observed to grow optimally at 25-30 °C and at pH 8.5 in the presence of 2-3 % (w/v) NaCl. The major fatty acids of strain CBA3205T were iso-C15 : 0, iso-C15 : 1 G, and iso-C17 : 0 3-OH. The major respiratory quinone was MK-6 and the major polar lipids were two unidentified amino-group-containing phospholipids and an unidentified polar lipid. The G+C content of the genomic DNA of strain CBA3205T was 62.5 mol%. Based on the phenotypic, genotypic and phylogenetic analyses, strain CBA3205T was considered to be a novel species belonging to the genus Croceitalea within the family Flavobacteriaceae, for which the name Croceitalea litorea sp. nov. is proposed. The type strain is CBA3205T ( = KACC 17669T = JCM 19531T).</abstract><cop>England</cop><pmid>26373987</pmid><doi>10.1099/ijsem.0.000613</doi><tpages>5</tpages><oa>free_for_read</oa></addata></record> |
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| subjects | Bacterial Typing Techniques Base Composition DNA, Bacterial - genetics Fatty Acids - chemistry Flavobacteriaceae - classification Flavobacteriaceae - genetics Flavobacteriaceae - isolation & purification Molecular Sequence Data Phospholipids - chemistry Phylogeny Pigmentation Republic of Korea RNA, Ribosomal, 16S - genetics Seawater - microbiology Sequence Analysis, DNA Silicon Dioxide Vitamin K 2 - analogs & derivatives Vitamin K 2 - chemistry |
| title | Croceitalea litorea sp. nov., isolated from seashore sand |
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