Plasmodium falciparum XPD translocates in 5′ to 3′ direction, is expressed throughout the blood stages, and interacts with p44
XPD helicase, a TFIIH subunit, is essential for several processes including transcription, NER, cell cycle regulation, and apoptosis in eukaryotes. Another component of TFIIH, namely p44, is among the well-known interacting partners of XPD and is vital in regulating the helicase activities of latter...
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description | XPD helicase, a TFIIH subunit, is essential for several processes including transcription, NER, cell cycle regulation, and apoptosis in eukaryotes. Another component of TFIIH, namely p44, is among the well-known interacting partners of XPD and is vital in regulating the helicase activities of latter. However, none of the above mentioned proteins have been functionally characterized in Plasmodium falciparum. Consequently, in this study, we performed detailed studies on XPD and its interacting partner, p44, from P. falciparum 3D7 strain. Accordingly, we expressed and purified recombinant PfXPD and its fragments and Pfp44 proteins and characterized the enzymatic activities of PfXPD and its fragments. The in vivo stage-specific expression and subcellular localizations of PfXPD and Pfp44 proteins were studied using the specific antibodies in the intraerythrocytic developmental stages of P. falciparum 3D7 strain. Our results suggest that PfXPD displays the characteristic ssDNA-dependent ATPase and 5′–3′ DNA helicase activities. We also report the existence of two high molecular weight forms of p44 in P. falciparum 3D7 strain. Both PfXPD and Pfp44 colocalize in the nucleus and interact with each other, which suggest that they are most likely components of the same complex apparently, TFIIH. Furthermore, during trophozoite and schizont stages, both proteins exhibit a distinct cytoplasmic distribution pattern which implies that PfXPD and Pfp44 might also be involved in other functions. These studies will aid in understanding the basic biology of malaria parasite. |
doi_str_mv | 10.1007/s00709-015-0779-4 |
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Another component of TFIIH, namely p44, is among the well-known interacting partners of XPD and is vital in regulating the helicase activities of latter. However, none of the above mentioned proteins have been functionally characterized in Plasmodium falciparum. Consequently, in this study, we performed detailed studies on XPD and its interacting partner, p44, from P. falciparum 3D7 strain. Accordingly, we expressed and purified recombinant PfXPD and its fragments and Pfp44 proteins and characterized the enzymatic activities of PfXPD and its fragments. The in vivo stage-specific expression and subcellular localizations of PfXPD and Pfp44 proteins were studied using the specific antibodies in the intraerythrocytic developmental stages of P. falciparum 3D7 strain. Our results suggest that PfXPD displays the characteristic ssDNA-dependent ATPase and 5′–3′ DNA helicase activities. We also report the existence of two high molecular weight forms of p44 in P. falciparum 3D7 strain. Both PfXPD and Pfp44 colocalize in the nucleus and interact with each other, which suggest that they are most likely components of the same complex apparently, TFIIH. Furthermore, during trophozoite and schizont stages, both proteins exhibit a distinct cytoplasmic distribution pattern which implies that PfXPD and Pfp44 might also be involved in other functions. These studies will aid in understanding the basic biology of malaria parasite.</description><identifier>ISSN: 0033-183X</identifier><identifier>EISSN: 1615-6102</identifier><identifier>DOI: 10.1007/s00709-015-0779-4</identifier><identifier>PMID: 25708921</identifier><language>eng</language><publisher>Vienna: Springer Vienna</publisher><subject>Active Transport, Cell Nucleus ; Adenosine Triphosphate - metabolism ; adenosinetriphosphatase ; antibodies ; apoptosis ; Biomedical and Life Sciences ; blood ; Cell Biology ; cell cycle ; Cell Nucleus - enzymology ; Cloning, Molecular ; Cytoplasm - enzymology ; developmental stages ; DNA - chemistry ; DNA - genetics ; DNA - metabolism ; DNA helicases ; enzyme activity ; eukaryotic cells ; Gene Expression Regulation, Developmental ; Hydrolysis ; Kinetics ; Life Cycle Stages ; Life Sciences ; malaria ; Molecular Weight ; Nucleic Acid Conformation ; Original Article ; parasites ; Plant Sciences ; Plasmodium falciparum ; Plasmodium falciparum - enzymology ; Plasmodium falciparum - genetics ; Plasmodium falciparum - growth & development ; Protein Binding ; proteins ; Protozoan Proteins - chemistry ; Protozoan Proteins - genetics ; Protozoan Proteins - metabolism ; Recombinant Proteins - metabolism ; Sequence Analysis, DNA ; Transcription Factor TFIIH - chemistry ; Transcription Factor TFIIH - genetics ; Transcription Factor TFIIH - metabolism ; Transcription, Genetic ; Xeroderma Pigmentosum Group D Protein - chemistry ; Xeroderma Pigmentosum Group D Protein - genetics ; Xeroderma Pigmentosum Group D Protein - metabolism ; Zoology</subject><ispartof>Protoplasma, 2015-11, Vol.252 (6), p.1487-1504</ispartof><rights>Springer-Verlag Wien 2015</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c429t-67c2fd16cc3f588103faa05d665625ebf1ddbed3728953314116b6e474c9259f3</citedby><cites>FETCH-LOGICAL-c429t-67c2fd16cc3f588103faa05d665625ebf1ddbed3728953314116b6e474c9259f3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00709-015-0779-4$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00709-015-0779-4$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27903,27904,41467,42536,51297</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/25708921$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Tajedin, Leila</creatorcontrib><creatorcontrib>Tarique, Mohammed</creatorcontrib><creatorcontrib>Tuteja, Renu</creatorcontrib><title>Plasmodium falciparum XPD translocates in 5′ to 3′ direction, is expressed throughout the blood stages, and interacts with p44</title><title>Protoplasma</title><addtitle>Protoplasma</addtitle><addtitle>Protoplasma</addtitle><description>XPD helicase, a TFIIH subunit, is essential for several processes including transcription, NER, cell cycle regulation, and apoptosis in eukaryotes. Another component of TFIIH, namely p44, is among the well-known interacting partners of XPD and is vital in regulating the helicase activities of latter. However, none of the above mentioned proteins have been functionally characterized in Plasmodium falciparum. Consequently, in this study, we performed detailed studies on XPD and its interacting partner, p44, from P. falciparum 3D7 strain. Accordingly, we expressed and purified recombinant PfXPD and its fragments and Pfp44 proteins and characterized the enzymatic activities of PfXPD and its fragments. The in vivo stage-specific expression and subcellular localizations of PfXPD and Pfp44 proteins were studied using the specific antibodies in the intraerythrocytic developmental stages of P. falciparum 3D7 strain. Our results suggest that PfXPD displays the characteristic ssDNA-dependent ATPase and 5′–3′ DNA helicase activities. We also report the existence of two high molecular weight forms of p44 in P. falciparum 3D7 strain. Both PfXPD and Pfp44 colocalize in the nucleus and interact with each other, which suggest that they are most likely components of the same complex apparently, TFIIH. Furthermore, during trophozoite and schizont stages, both proteins exhibit a distinct cytoplasmic distribution pattern which implies that PfXPD and Pfp44 might also be involved in other functions. These studies will aid in understanding the basic biology of malaria parasite.</description><subject>Active Transport, Cell Nucleus</subject><subject>Adenosine Triphosphate - metabolism</subject><subject>adenosinetriphosphatase</subject><subject>antibodies</subject><subject>apoptosis</subject><subject>Biomedical and Life Sciences</subject><subject>blood</subject><subject>Cell Biology</subject><subject>cell cycle</subject><subject>Cell Nucleus - enzymology</subject><subject>Cloning, Molecular</subject><subject>Cytoplasm - enzymology</subject><subject>developmental stages</subject><subject>DNA - chemistry</subject><subject>DNA - genetics</subject><subject>DNA - metabolism</subject><subject>DNA helicases</subject><subject>enzyme activity</subject><subject>eukaryotic cells</subject><subject>Gene Expression Regulation, Developmental</subject><subject>Hydrolysis</subject><subject>Kinetics</subject><subject>Life Cycle Stages</subject><subject>Life Sciences</subject><subject>malaria</subject><subject>Molecular Weight</subject><subject>Nucleic Acid Conformation</subject><subject>Original Article</subject><subject>parasites</subject><subject>Plant Sciences</subject><subject>Plasmodium falciparum</subject><subject>Plasmodium falciparum - enzymology</subject><subject>Plasmodium falciparum - genetics</subject><subject>Plasmodium falciparum - growth & development</subject><subject>Protein Binding</subject><subject>proteins</subject><subject>Protozoan Proteins - chemistry</subject><subject>Protozoan Proteins - genetics</subject><subject>Protozoan Proteins - metabolism</subject><subject>Recombinant Proteins - metabolism</subject><subject>Sequence Analysis, DNA</subject><subject>Transcription Factor TFIIH - chemistry</subject><subject>Transcription Factor TFIIH - genetics</subject><subject>Transcription Factor TFIIH - metabolism</subject><subject>Transcription, Genetic</subject><subject>Xeroderma Pigmentosum Group D Protein - chemistry</subject><subject>Xeroderma Pigmentosum Group D Protein - genetics</subject><subject>Xeroderma Pigmentosum Group D Protein - metabolism</subject><subject>Zoology</subject><issn>0033-183X</issn><issn>1615-6102</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNqNks2KFTEQhYMoznX0AdxowI2Laa38dmcp4y8MOKADswvpJH1vhu7ONUmj7sRH8pF8EnPtUcSFuElVke-cIpwgdJ_AEwLQPs31ANUAEQ20rWr4DbQhsk6SAL2JNgCMNaRjl0foTs5XACAoiNvoiIoWOkXJBn09H02eogvLhAcz2rA3qbaX589xSWbOY7Sm-IzDjMX3L99wiZgdqgvJ2xLifIJDxv7TPvmcvcNll-Ky3cWl1NbjfozR4VzM1ucTbGZXjYpPxpaMP4ayw3vO76JbdXP2967rMbp4-eL96evm7O2rN6fPzhrLqSqNbC0dHJHWskF0HQE2GAPCSSkkFb4fiHO9d6ylnRKMEU6I7KXnLbeKCjWwY_R49d2n-GHxuegpZOvH0cw-LlmTlstOVSH8B0o72QJXtKKP_kKv4pLm-pCfFBOd4geKrJRNMefkB71PYTLpsyagD1nqNUtds9SHLDWvmgfXzks_efdb8Su8CtAVyPVq3vr0x-p_uD5cRYOJ2mxTyPriHQUi6-8gQhDOfgB-FLOs</recordid><startdate>20151101</startdate><enddate>20151101</enddate><creator>Tajedin, Leila</creator><creator>Tarique, Mohammed</creator><creator>Tuteja, Renu</creator><general>Springer Vienna</general><general>Springer Nature B.V</general><scope>FBQ</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7RV</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>88G</scope><scope>8AO</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>KB0</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2M</scope><scope>M7P</scope><scope>NAPCQ</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>PSYQQ</scope><scope>Q9U</scope><scope>7X8</scope><scope>C1K</scope><scope>F1W</scope><scope>H95</scope><scope>H97</scope><scope>L.G</scope><scope>M7N</scope></search><sort><creationdate>20151101</creationdate><title>Plasmodium falciparum XPD translocates in 5′ to 3′ direction, is expressed throughout the blood stages, and interacts with p44</title><author>Tajedin, Leila ; Tarique, Mohammed ; Tuteja, Renu</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c429t-67c2fd16cc3f588103faa05d665625ebf1ddbed3728953314116b6e474c9259f3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>Active Transport, Cell Nucleus</topic><topic>Adenosine Triphosphate - metabolism</topic><topic>adenosinetriphosphatase</topic><topic>antibodies</topic><topic>apoptosis</topic><topic>Biomedical and Life Sciences</topic><topic>blood</topic><topic>Cell Biology</topic><topic>cell cycle</topic><topic>Cell Nucleus - enzymology</topic><topic>Cloning, Molecular</topic><topic>Cytoplasm - enzymology</topic><topic>developmental stages</topic><topic>DNA - chemistry</topic><topic>DNA - genetics</topic><topic>DNA - metabolism</topic><topic>DNA helicases</topic><topic>enzyme activity</topic><topic>eukaryotic cells</topic><topic>Gene Expression Regulation, Developmental</topic><topic>Hydrolysis</topic><topic>Kinetics</topic><topic>Life Cycle Stages</topic><topic>Life Sciences</topic><topic>malaria</topic><topic>Molecular Weight</topic><topic>Nucleic Acid Conformation</topic><topic>Original Article</topic><topic>parasites</topic><topic>Plant Sciences</topic><topic>Plasmodium falciparum</topic><topic>Plasmodium falciparum - enzymology</topic><topic>Plasmodium falciparum - genetics</topic><topic>Plasmodium falciparum - growth & development</topic><topic>Protein Binding</topic><topic>proteins</topic><topic>Protozoan Proteins - chemistry</topic><topic>Protozoan Proteins - genetics</topic><topic>Protozoan Proteins - metabolism</topic><topic>Recombinant Proteins - metabolism</topic><topic>Sequence Analysis, DNA</topic><topic>Transcription Factor TFIIH - chemistry</topic><topic>Transcription Factor TFIIH - genetics</topic><topic>Transcription Factor TFIIH - metabolism</topic><topic>Transcription, Genetic</topic><topic>Xeroderma Pigmentosum Group D Protein - chemistry</topic><topic>Xeroderma Pigmentosum Group D Protein - genetics</topic><topic>Xeroderma Pigmentosum Group D Protein - metabolism</topic><topic>Zoology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Tajedin, Leila</creatorcontrib><creatorcontrib>Tarique, Mohammed</creatorcontrib><creatorcontrib>Tuteja, Renu</creatorcontrib><collection>AGRIS</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Proquest Nursing & Allied Health Source</collection><collection>ProQuest Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Psychology Database (Alumni)</collection><collection>ProQuest Pharma Collection</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Databases</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Nursing & Allied Health Database (Alumni Edition)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>ProQuest Psychology</collection><collection>Biological Science Database</collection><collection>Nursing & Allied Health Premium</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>ProQuest One Psychology</collection><collection>ProQuest Central Basic</collection><collection>MEDLINE - Academic</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 3: Aquatic Pollution & Environmental Quality</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><jtitle>Protoplasma</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Tajedin, Leila</au><au>Tarique, Mohammed</au><au>Tuteja, Renu</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Plasmodium falciparum XPD translocates in 5′ to 3′ direction, is expressed throughout the blood stages, and interacts with p44</atitle><jtitle>Protoplasma</jtitle><stitle>Protoplasma</stitle><addtitle>Protoplasma</addtitle><date>2015-11-01</date><risdate>2015</risdate><volume>252</volume><issue>6</issue><spage>1487</spage><epage>1504</epage><pages>1487-1504</pages><issn>0033-183X</issn><eissn>1615-6102</eissn><abstract>XPD helicase, a TFIIH subunit, is essential for several processes including transcription, NER, cell cycle regulation, and apoptosis in eukaryotes. Another component of TFIIH, namely p44, is among the well-known interacting partners of XPD and is vital in regulating the helicase activities of latter. However, none of the above mentioned proteins have been functionally characterized in Plasmodium falciparum. Consequently, in this study, we performed detailed studies on XPD and its interacting partner, p44, from P. falciparum 3D7 strain. Accordingly, we expressed and purified recombinant PfXPD and its fragments and Pfp44 proteins and characterized the enzymatic activities of PfXPD and its fragments. The in vivo stage-specific expression and subcellular localizations of PfXPD and Pfp44 proteins were studied using the specific antibodies in the intraerythrocytic developmental stages of P. falciparum 3D7 strain. Our results suggest that PfXPD displays the characteristic ssDNA-dependent ATPase and 5′–3′ DNA helicase activities. We also report the existence of two high molecular weight forms of p44 in P. falciparum 3D7 strain. Both PfXPD and Pfp44 colocalize in the nucleus and interact with each other, which suggest that they are most likely components of the same complex apparently, TFIIH. Furthermore, during trophozoite and schizont stages, both proteins exhibit a distinct cytoplasmic distribution pattern which implies that PfXPD and Pfp44 might also be involved in other functions. These studies will aid in understanding the basic biology of malaria parasite.</abstract><cop>Vienna</cop><pub>Springer Vienna</pub><pmid>25708921</pmid><doi>10.1007/s00709-015-0779-4</doi><tpages>18</tpages></addata></record> |
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subjects | Active Transport, Cell Nucleus Adenosine Triphosphate - metabolism adenosinetriphosphatase antibodies apoptosis Biomedical and Life Sciences blood Cell Biology cell cycle Cell Nucleus - enzymology Cloning, Molecular Cytoplasm - enzymology developmental stages DNA - chemistry DNA - genetics DNA - metabolism DNA helicases enzyme activity eukaryotic cells Gene Expression Regulation, Developmental Hydrolysis Kinetics Life Cycle Stages Life Sciences malaria Molecular Weight Nucleic Acid Conformation Original Article parasites Plant Sciences Plasmodium falciparum Plasmodium falciparum - enzymology Plasmodium falciparum - genetics Plasmodium falciparum - growth & development Protein Binding proteins Protozoan Proteins - chemistry Protozoan Proteins - genetics Protozoan Proteins - metabolism Recombinant Proteins - metabolism Sequence Analysis, DNA Transcription Factor TFIIH - chemistry Transcription Factor TFIIH - genetics Transcription Factor TFIIH - metabolism Transcription, Genetic Xeroderma Pigmentosum Group D Protein - chemistry Xeroderma Pigmentosum Group D Protein - genetics Xeroderma Pigmentosum Group D Protein - metabolism Zoology |
title | Plasmodium falciparum XPD translocates in 5′ to 3′ direction, is expressed throughout the blood stages, and interacts with p44 |
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