NO-MNDO:  Reintroduction of the Overlap Matrix into MNDO

The effect of reintroducing the overlap matrix into the secular equations for an NDDO (neglect of diatomic differential overlap)-based semiempirical molecular orbital method has been investigated. The modification is expected to improve the description of interactions between electron pairs. The ide...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Journal of chemical theory and computation 2006-03, Vol.2 (2), p.413-419
Hauptverfasser: Sattelmeyer, Kurt W, Tubert-Brohman, Ivan, Jorgensen, William L
Format: Artikel
Sprache:eng
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 419
container_issue 2
container_start_page 413
container_title Journal of chemical theory and computation
container_volume 2
creator Sattelmeyer, Kurt W
Tubert-Brohman, Ivan
Jorgensen, William L
description The effect of reintroducing the overlap matrix into the secular equations for an NDDO (neglect of diatomic differential overlap)-based semiempirical molecular orbital method has been investigated. The modification is expected to improve the description of interactions between electron pairs. The idea has been tested by implementation and evaluation of a nonorthogonal version of the MNDO method (NO-MNDO) with parametrization for hydrogen, carbon, nitrogen, and oxygen. Overall, the accuracy of NO-MNDO for heats of formation is nearly identical to that for the more highly parametrized AM1 method. The mean absolute error (MAE) for heats of formation of a comprehensive set of 622 neutral, closed-shell molecules is reduced from 8.4 kcal/mol with MNDO to 6.8 kcal/mol with NO-MNDO. In addition, the performance for conformational equilibria and torsional barriers is significantly improved with NO-MNDO, presumably owing to the improved description of closed-shell interactions. For molecular geometries, the usual training and test sets have been expanded through use of MP2/6-31G(d) results for consistent comparisons. The performance of NO-MNDO for bond lengths, bond angles, and dihedral angles remains good with MAEs of 0.017 Å, 2.5°, and 4.5°. Additionally, NO-MNDO corrects severe errors by MNDO for R• + H−R‘ hydrogen-atom transfers, while testing for activation barriers for nine pericyclic reactions reveals only modest improvement.
doi_str_mv 10.1021/ct050174c
format Article
fullrecord <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_1738815926</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>1738815926</sourcerecordid><originalsourceid>FETCH-LOGICAL-a315t-7daf483f0543c0da6d24c38d7606b43cf1db1d3c4fa789b06c0ec37db5c4fa163</originalsourceid><addsrcrecordid>eNpt0E1LwzAYB_AgipvTg19AchH0UE2aNE13G_MVthVEzyXNC3Z0zUxS0ZtXv6afxJbNnTw94eGXPzx_AE4xusIoxtcyoAThlMo9MMQJzaKMxWx_98Z8AI68XyJECI3JIRjErANJzIdgvMij-eImH_98fcMnXTXBWdXKUNkGWgPDq4b5u3a1WMO5CK76gB2xsP9yDA6MqL0-2c4ReLm7fZ4-RLP8_nE6mUWC4CREqRKGcmJQQolESjAVU0m4ShliZbcyWJVYEUmNSHlWIiaRliRVZdKvMCMjcLHJXTv71mofilXlpa5r0Wjb-gKnhHOcZHFPLzdUOuu906ZYu2ol3GeBUdFXVeyq6uzZNrYtV1rt5F83HTjfACF9sbSta7or_wn6Bb8zbrU</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1738815926</pqid></control><display><type>article</type><title>NO-MNDO:  Reintroduction of the Overlap Matrix into MNDO</title><source>ACS_美国化学学会期刊(与NSTL共建)</source><creator>Sattelmeyer, Kurt W ; Tubert-Brohman, Ivan ; Jorgensen, William L</creator><creatorcontrib>Sattelmeyer, Kurt W ; Tubert-Brohman, Ivan ; Jorgensen, William L</creatorcontrib><description>The effect of reintroducing the overlap matrix into the secular equations for an NDDO (neglect of diatomic differential overlap)-based semiempirical molecular orbital method has been investigated. The modification is expected to improve the description of interactions between electron pairs. The idea has been tested by implementation and evaluation of a nonorthogonal version of the MNDO method (NO-MNDO) with parametrization for hydrogen, carbon, nitrogen, and oxygen. Overall, the accuracy of NO-MNDO for heats of formation is nearly identical to that for the more highly parametrized AM1 method. The mean absolute error (MAE) for heats of formation of a comprehensive set of 622 neutral, closed-shell molecules is reduced from 8.4 kcal/mol with MNDO to 6.8 kcal/mol with NO-MNDO. In addition, the performance for conformational equilibria and torsional barriers is significantly improved with NO-MNDO, presumably owing to the improved description of closed-shell interactions. For molecular geometries, the usual training and test sets have been expanded through use of MP2/6-31G(d) results for consistent comparisons. The performance of NO-MNDO for bond lengths, bond angles, and dihedral angles remains good with MAEs of 0.017 Å, 2.5°, and 4.5°. Additionally, NO-MNDO corrects severe errors by MNDO for R• + H−R‘ hydrogen-atom transfers, while testing for activation barriers for nine pericyclic reactions reveals only modest improvement.</description><identifier>ISSN: 1549-9618</identifier><identifier>EISSN: 1549-9626</identifier><identifier>DOI: 10.1021/ct050174c</identifier><identifier>PMID: 26626528</identifier><language>eng</language><publisher>United States: American Chemical Society</publisher><ispartof>Journal of chemical theory and computation, 2006-03, Vol.2 (2), p.413-419</ispartof><rights>Copyright © 2006 American Chemical Society</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-a315t-7daf483f0543c0da6d24c38d7606b43cf1db1d3c4fa789b06c0ec37db5c4fa163</citedby><cites>FETCH-LOGICAL-a315t-7daf483f0543c0da6d24c38d7606b43cf1db1d3c4fa789b06c0ec37db5c4fa163</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://pubs.acs.org/doi/pdf/10.1021/ct050174c$$EPDF$$P50$$Gacs$$H</linktopdf><linktohtml>$$Uhttps://pubs.acs.org/doi/10.1021/ct050174c$$EHTML$$P50$$Gacs$$H</linktohtml><link.rule.ids>314,780,784,2765,27076,27924,27925,56738,56788</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/26626528$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Sattelmeyer, Kurt W</creatorcontrib><creatorcontrib>Tubert-Brohman, Ivan</creatorcontrib><creatorcontrib>Jorgensen, William L</creatorcontrib><title>NO-MNDO:  Reintroduction of the Overlap Matrix into MNDO</title><title>Journal of chemical theory and computation</title><addtitle>J. Chem. Theory Comput</addtitle><description>The effect of reintroducing the overlap matrix into the secular equations for an NDDO (neglect of diatomic differential overlap)-based semiempirical molecular orbital method has been investigated. The modification is expected to improve the description of interactions between electron pairs. The idea has been tested by implementation and evaluation of a nonorthogonal version of the MNDO method (NO-MNDO) with parametrization for hydrogen, carbon, nitrogen, and oxygen. Overall, the accuracy of NO-MNDO for heats of formation is nearly identical to that for the more highly parametrized AM1 method. The mean absolute error (MAE) for heats of formation of a comprehensive set of 622 neutral, closed-shell molecules is reduced from 8.4 kcal/mol with MNDO to 6.8 kcal/mol with NO-MNDO. In addition, the performance for conformational equilibria and torsional barriers is significantly improved with NO-MNDO, presumably owing to the improved description of closed-shell interactions. For molecular geometries, the usual training and test sets have been expanded through use of MP2/6-31G(d) results for consistent comparisons. The performance of NO-MNDO for bond lengths, bond angles, and dihedral angles remains good with MAEs of 0.017 Å, 2.5°, and 4.5°. Additionally, NO-MNDO corrects severe errors by MNDO for R• + H−R‘ hydrogen-atom transfers, while testing for activation barriers for nine pericyclic reactions reveals only modest improvement.</description><issn>1549-9618</issn><issn>1549-9626</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2006</creationdate><recordtype>article</recordtype><recordid>eNpt0E1LwzAYB_AgipvTg19AchH0UE2aNE13G_MVthVEzyXNC3Z0zUxS0ZtXv6afxJbNnTw94eGXPzx_AE4xusIoxtcyoAThlMo9MMQJzaKMxWx_98Z8AI68XyJECI3JIRjErANJzIdgvMij-eImH_98fcMnXTXBWdXKUNkGWgPDq4b5u3a1WMO5CK76gB2xsP9yDA6MqL0-2c4ReLm7fZ4-RLP8_nE6mUWC4CREqRKGcmJQQolESjAVU0m4ShliZbcyWJVYEUmNSHlWIiaRliRVZdKvMCMjcLHJXTv71mofilXlpa5r0Wjb-gKnhHOcZHFPLzdUOuu906ZYu2ol3GeBUdFXVeyq6uzZNrYtV1rt5F83HTjfACF9sbSta7or_wn6Bb8zbrU</recordid><startdate>20060301</startdate><enddate>20060301</enddate><creator>Sattelmeyer, Kurt W</creator><creator>Tubert-Brohman, Ivan</creator><creator>Jorgensen, William L</creator><general>American Chemical Society</general><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>20060301</creationdate><title>NO-MNDO:  Reintroduction of the Overlap Matrix into MNDO</title><author>Sattelmeyer, Kurt W ; Tubert-Brohman, Ivan ; Jorgensen, William L</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a315t-7daf483f0543c0da6d24c38d7606b43cf1db1d3c4fa789b06c0ec37db5c4fa163</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2006</creationdate><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Sattelmeyer, Kurt W</creatorcontrib><creatorcontrib>Tubert-Brohman, Ivan</creatorcontrib><creatorcontrib>Jorgensen, William L</creatorcontrib><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of chemical theory and computation</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Sattelmeyer, Kurt W</au><au>Tubert-Brohman, Ivan</au><au>Jorgensen, William L</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>NO-MNDO:  Reintroduction of the Overlap Matrix into MNDO</atitle><jtitle>Journal of chemical theory and computation</jtitle><addtitle>J. Chem. Theory Comput</addtitle><date>2006-03-01</date><risdate>2006</risdate><volume>2</volume><issue>2</issue><spage>413</spage><epage>419</epage><pages>413-419</pages><issn>1549-9618</issn><eissn>1549-9626</eissn><abstract>The effect of reintroducing the overlap matrix into the secular equations for an NDDO (neglect of diatomic differential overlap)-based semiempirical molecular orbital method has been investigated. The modification is expected to improve the description of interactions between electron pairs. The idea has been tested by implementation and evaluation of a nonorthogonal version of the MNDO method (NO-MNDO) with parametrization for hydrogen, carbon, nitrogen, and oxygen. Overall, the accuracy of NO-MNDO for heats of formation is nearly identical to that for the more highly parametrized AM1 method. The mean absolute error (MAE) for heats of formation of a comprehensive set of 622 neutral, closed-shell molecules is reduced from 8.4 kcal/mol with MNDO to 6.8 kcal/mol with NO-MNDO. In addition, the performance for conformational equilibria and torsional barriers is significantly improved with NO-MNDO, presumably owing to the improved description of closed-shell interactions. For molecular geometries, the usual training and test sets have been expanded through use of MP2/6-31G(d) results for consistent comparisons. The performance of NO-MNDO for bond lengths, bond angles, and dihedral angles remains good with MAEs of 0.017 Å, 2.5°, and 4.5°. Additionally, NO-MNDO corrects severe errors by MNDO for R• + H−R‘ hydrogen-atom transfers, while testing for activation barriers for nine pericyclic reactions reveals only modest improvement.</abstract><cop>United States</cop><pub>American Chemical Society</pub><pmid>26626528</pmid><doi>10.1021/ct050174c</doi><tpages>7</tpages></addata></record>
fulltext fulltext
identifier ISSN: 1549-9618
ispartof Journal of chemical theory and computation, 2006-03, Vol.2 (2), p.413-419
issn 1549-9618
1549-9626
language eng
recordid cdi_proquest_miscellaneous_1738815926
source ACS_美国化学学会期刊(与NSTL共建)
title NO-MNDO:  Reintroduction of the Overlap Matrix into MNDO
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-07T15%3A38%3A50IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=NO-MNDO:%E2%80%89%20Reintroduction%20of%20the%20Overlap%20Matrix%20into%20MNDO&rft.jtitle=Journal%20of%20chemical%20theory%20and%20computation&rft.au=Sattelmeyer,%20Kurt%20W&rft.date=2006-03-01&rft.volume=2&rft.issue=2&rft.spage=413&rft.epage=419&rft.pages=413-419&rft.issn=1549-9618&rft.eissn=1549-9626&rft_id=info:doi/10.1021/ct050174c&rft_dat=%3Cproquest_cross%3E1738815926%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=1738815926&rft_id=info:pmid/26626528&rfr_iscdi=true