Recombinant Trichoderma harzianum endoglucanase I (Cel7B) is a highly acidic and promiscuous carbohydrate-active enzyme
Trichoderma filamentous fungi have been investigated due to their ability to secrete cellulases which find various biotechnological applications such as biomass hydrolysis and cellulosic ethanol production. Previous studies demonstrated that Trichoderma harzianum IOC-3844 has a high degree of cellul...
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creator | Pellegrini, Vanessa O. A Serpa, Viviane Isabel Godoy, Andre S Camilo, Cesar M Bernardes, Amanda Rezende, Camila A Junior, Nei Pereira Franco Cairo, João Paulo L Squina, Fabio M Polikarpov, Igor |
description | Trichoderma filamentous fungi have been investigated due to their ability to secrete cellulases which find various biotechnological applications such as biomass hydrolysis and cellulosic ethanol production. Previous studies demonstrated that Trichoderma harzianum IOC-3844 has a high degree of cellulolytic activity and potential for biomass hydrolysis. However, enzymatic, biochemical, and structural studies of cellulases from T. harzianum are scarce. This work reports biochemical characterization of the recombinant endoglucanase I from T. harzianum, ThCel7B, and its catalytic core domain. The constructs display optimum activity at 55 °C and a surprisingly acidic pH optimum of 3.0. The full-length enzyme is able to hydrolyze a variety of substrates, with high specific activity: 75 U/mg for β-glucan, 46 U/mg toward xyloglucan, 39 U/mg for lichenan, 26 U/mg for carboxymethyl cellulose, 18 U/mg for 4-nitrophenyl β-D-cellobioside, 16 U/mg for rye arabinoxylan, and 12 U/mg toward xylan. The enzyme also hydrolyzed filter paper, phosphoric acid swollen cellulose, Sigmacell 20, Avicel PH-101, and cellulose, albeit with lower efficiency. The ThCel7B catalytic domain displays similar substrate diversity. Fluorescence-based thermal shift assays showed that thermal stability is highest at pH 5.0. We determined kinetic parameters and analyzed a pattern of oligosaccharide substrates hydrolysis, revealing cellobiose as a final product of C6 degradation. Finally, we visualized effects of ThCel7B on oat spelt using scanning electron microscopy, demonstrating the morphological changes of the substrate during the hydrolysis. The acidic behavior of ThCel7B and its considerable thermostability hold a promise of its industrial applications and other biotechnological uses under extremely acidic conditions. |
doi_str_mv | 10.1007/s00253-015-6772-1 |
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A ; Serpa, Viviane Isabel ; Godoy, Andre S ; Camilo, Cesar M ; Bernardes, Amanda ; Rezende, Camila A ; Junior, Nei Pereira ; Franco Cairo, João Paulo L ; Squina, Fabio M ; Polikarpov, Igor</creator><creatorcontrib>Pellegrini, Vanessa O. A ; Serpa, Viviane Isabel ; Godoy, Andre S ; Camilo, Cesar M ; Bernardes, Amanda ; Rezende, Camila A ; Junior, Nei Pereira ; Franco Cairo, João Paulo L ; Squina, Fabio M ; Polikarpov, Igor</creatorcontrib><description>Trichoderma filamentous fungi have been investigated due to their ability to secrete cellulases which find various biotechnological applications such as biomass hydrolysis and cellulosic ethanol production. Previous studies demonstrated that Trichoderma harzianum IOC-3844 has a high degree of cellulolytic activity and potential for biomass hydrolysis. However, enzymatic, biochemical, and structural studies of cellulases from T. harzianum are scarce. This work reports biochemical characterization of the recombinant endoglucanase I from T. harzianum, ThCel7B, and its catalytic core domain. The constructs display optimum activity at 55 °C and a surprisingly acidic pH optimum of 3.0. The full-length enzyme is able to hydrolyze a variety of substrates, with high specific activity: 75 U/mg for β-glucan, 46 U/mg toward xyloglucan, 39 U/mg for lichenan, 26 U/mg for carboxymethyl cellulose, 18 U/mg for 4-nitrophenyl β-D-cellobioside, 16 U/mg for rye arabinoxylan, and 12 U/mg toward xylan. The enzyme also hydrolyzed filter paper, phosphoric acid swollen cellulose, Sigmacell 20, Avicel PH-101, and cellulose, albeit with lower efficiency. The ThCel7B catalytic domain displays similar substrate diversity. Fluorescence-based thermal shift assays showed that thermal stability is highest at pH 5.0. We determined kinetic parameters and analyzed a pattern of oligosaccharide substrates hydrolysis, revealing cellobiose as a final product of C6 degradation. Finally, we visualized effects of ThCel7B on oat spelt using scanning electron microscopy, demonstrating the morphological changes of the substrate during the hydrolysis. The acidic behavior of ThCel7B and its considerable thermostability hold a promise of its industrial applications and other biotechnological uses under extremely acidic conditions.</description><identifier>ISSN: 0175-7598</identifier><identifier>EISSN: 1432-0614</identifier><identifier>DOI: 10.1007/s00253-015-6772-1</identifier><identifier>PMID: 26156238</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer Berlin Heidelberg</publisher><subject>active sites ; Analysis ; arabinoxylan ; beta-glucans ; Biodiesel fuels ; bioethanol ; Biofuels ; Biomass ; Biomedical and Life Sciences ; Biotechnologically Relevant Enzymes and Proteins ; Biotechnology ; Carbohydrate Metabolism ; carboxymethylcellulose ; cellobiose ; Cellulase ; Cellulases - chemistry ; Cellulases - genetics ; Cellulases - metabolism ; Cellulose ; Cellulose - metabolism ; Cloning ; endo-1,4-beta-glucanase ; Energy consumption ; Enzyme Stability ; Enzymes ; Ethanol ; ethanol production ; Fungi ; Genetic recombination ; Genomes ; Hydrogen-Ion Concentration ; Hydrolysis ; industrial applications ; Kinetics ; Life Sciences ; Lignocellulose ; Microbial Genetics and Genomics ; Microbiology ; Morphology ; oats ; Phosphates ; Phosphoric acid ; Recombinant Proteins - chemistry ; Recombinant Proteins - genetics ; Recombinant Proteins - metabolism ; rye ; scanning electron microscopy ; Studies ; Substrate Specificity ; Substrates ; Temperature ; thermal stability ; Trichoderma - enzymology ; Trichoderma - genetics ; Trichoderma harzianum ; xylan ; xyloglucans</subject><ispartof>Applied microbiology and biotechnology, 2015-11, Vol.99 (22), p.9591-9604</ispartof><rights>Springer-Verlag Berlin Heidelberg 2015</rights><rights>COPYRIGHT 2015 Springer</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c637t-5d1f7cce657a14c84a1e29a8a6e6f6e875ff5426a55696bc8ff494a19de418423</citedby><cites>FETCH-LOGICAL-c637t-5d1f7cce657a14c84a1e29a8a6e6f6e875ff5426a55696bc8ff494a19de418423</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00253-015-6772-1$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00253-015-6772-1$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27903,27904,41467,42536,51297</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/26156238$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Pellegrini, Vanessa O. A</creatorcontrib><creatorcontrib>Serpa, Viviane Isabel</creatorcontrib><creatorcontrib>Godoy, Andre S</creatorcontrib><creatorcontrib>Camilo, Cesar M</creatorcontrib><creatorcontrib>Bernardes, Amanda</creatorcontrib><creatorcontrib>Rezende, Camila A</creatorcontrib><creatorcontrib>Junior, Nei Pereira</creatorcontrib><creatorcontrib>Franco Cairo, João Paulo L</creatorcontrib><creatorcontrib>Squina, Fabio M</creatorcontrib><creatorcontrib>Polikarpov, Igor</creatorcontrib><title>Recombinant Trichoderma harzianum endoglucanase I (Cel7B) is a highly acidic and promiscuous carbohydrate-active enzyme</title><title>Applied microbiology and biotechnology</title><addtitle>Appl Microbiol Biotechnol</addtitle><addtitle>Appl Microbiol Biotechnol</addtitle><description>Trichoderma filamentous fungi have been investigated due to their ability to secrete cellulases which find various biotechnological applications such as biomass hydrolysis and cellulosic ethanol production. Previous studies demonstrated that Trichoderma harzianum IOC-3844 has a high degree of cellulolytic activity and potential for biomass hydrolysis. However, enzymatic, biochemical, and structural studies of cellulases from T. harzianum are scarce. This work reports biochemical characterization of the recombinant endoglucanase I from T. harzianum, ThCel7B, and its catalytic core domain. The constructs display optimum activity at 55 °C and a surprisingly acidic pH optimum of 3.0. The full-length enzyme is able to hydrolyze a variety of substrates, with high specific activity: 75 U/mg for β-glucan, 46 U/mg toward xyloglucan, 39 U/mg for lichenan, 26 U/mg for carboxymethyl cellulose, 18 U/mg for 4-nitrophenyl β-D-cellobioside, 16 U/mg for rye arabinoxylan, and 12 U/mg toward xylan. The enzyme also hydrolyzed filter paper, phosphoric acid swollen cellulose, Sigmacell 20, Avicel PH-101, and cellulose, albeit with lower efficiency. The ThCel7B catalytic domain displays similar substrate diversity. Fluorescence-based thermal shift assays showed that thermal stability is highest at pH 5.0. We determined kinetic parameters and analyzed a pattern of oligosaccharide substrates hydrolysis, revealing cellobiose as a final product of C6 degradation. Finally, we visualized effects of ThCel7B on oat spelt using scanning electron microscopy, demonstrating the morphological changes of the substrate during the hydrolysis. The acidic behavior of ThCel7B and its considerable thermostability hold a promise of its industrial applications and other biotechnological uses under extremely acidic conditions.</description><subject>active sites</subject><subject>Analysis</subject><subject>arabinoxylan</subject><subject>beta-glucans</subject><subject>Biodiesel fuels</subject><subject>bioethanol</subject><subject>Biofuels</subject><subject>Biomass</subject><subject>Biomedical and Life Sciences</subject><subject>Biotechnologically Relevant Enzymes and Proteins</subject><subject>Biotechnology</subject><subject>Carbohydrate Metabolism</subject><subject>carboxymethylcellulose</subject><subject>cellobiose</subject><subject>Cellulase</subject><subject>Cellulases - chemistry</subject><subject>Cellulases - genetics</subject><subject>Cellulases - metabolism</subject><subject>Cellulose</subject><subject>Cellulose - metabolism</subject><subject>Cloning</subject><subject>endo-1,4-beta-glucanase</subject><subject>Energy consumption</subject><subject>Enzyme Stability</subject><subject>Enzymes</subject><subject>Ethanol</subject><subject>ethanol production</subject><subject>Fungi</subject><subject>Genetic recombination</subject><subject>Genomes</subject><subject>Hydrogen-Ion Concentration</subject><subject>Hydrolysis</subject><subject>industrial applications</subject><subject>Kinetics</subject><subject>Life Sciences</subject><subject>Lignocellulose</subject><subject>Microbial Genetics and Genomics</subject><subject>Microbiology</subject><subject>Morphology</subject><subject>oats</subject><subject>Phosphates</subject><subject>Phosphoric acid</subject><subject>Recombinant Proteins - chemistry</subject><subject>Recombinant Proteins - genetics</subject><subject>Recombinant Proteins - metabolism</subject><subject>rye</subject><subject>scanning electron microscopy</subject><subject>Studies</subject><subject>Substrate Specificity</subject><subject>Substrates</subject><subject>Temperature</subject><subject>thermal stability</subject><subject>Trichoderma - enzymology</subject><subject>Trichoderma - genetics</subject><subject>Trichoderma harzianum</subject><subject>xylan</subject><subject>xyloglucans</subject><issn>0175-7598</issn><issn>1432-0614</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><recordid>eNqNkktv1DAUhSMEokPhB7CBSGzaRYrfTpZlVGCkSkh9rK07znXGVR7FTqDTX4_DlMcghJAXlny_c3SudbLsJSUnlBD9NhLCJC8IlYXSmhX0UbaggrOCKCoeZwtCtSy0rMqD7FmMN4RQVir1NDtgikrFeLnIvl6gHbq176Ef86vg7WaoMXSQbyDce-inLse-Hpp2stBDxHyVHy2x1e-Ocx_zhPlm025zsL72Noe-zm_D0Plop2GKuYWwHjbbOsCIBdjRf8Fkd7_t8Hn2xEEb8cXDfZhdvz-7Wn4szj99WC1PzwuruB4LWVOnrUUlNVBhSwEUWQUlKFROYamlc1IwBVKqSq1t6ZyoElTVKGgpGD_Mjna-KdbnCeNo5nDYttBjSmio5rJiTBD1H-j8exVVM_rmD_RmmEKfFvlOcVmyqvxFNdCi8b0bxgB2NjWngnPGCOckUSd_odKpsfN26NH59L4nON4TJGbEu7GBKUazurzYZ-mOtWGIMaAzt8F3ELaGEjN3yOw6ZFKHzNwhQ5Pm1cNy07rD-qfiR2kSwHZATKO-wfDb9v9wfb0TORgMNMFHc33JCFVkRgWh_Bt8qdeF</recordid><startdate>20151101</startdate><enddate>20151101</enddate><creator>Pellegrini, Vanessa O. 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A ; Serpa, Viviane Isabel ; Godoy, Andre S ; Camilo, Cesar M ; Bernardes, Amanda ; Rezende, Camila A ; Junior, Nei Pereira ; Franco Cairo, João Paulo L ; Squina, Fabio M ; Polikarpov, Igor</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c637t-5d1f7cce657a14c84a1e29a8a6e6f6e875ff5426a55696bc8ff494a19de418423</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>active sites</topic><topic>Analysis</topic><topic>arabinoxylan</topic><topic>beta-glucans</topic><topic>Biodiesel fuels</topic><topic>bioethanol</topic><topic>Biofuels</topic><topic>Biomass</topic><topic>Biomedical and Life Sciences</topic><topic>Biotechnologically Relevant Enzymes and Proteins</topic><topic>Biotechnology</topic><topic>Carbohydrate Metabolism</topic><topic>carboxymethylcellulose</topic><topic>cellobiose</topic><topic>Cellulase</topic><topic>Cellulases - chemistry</topic><topic>Cellulases - genetics</topic><topic>Cellulases - metabolism</topic><topic>Cellulose</topic><topic>Cellulose - metabolism</topic><topic>Cloning</topic><topic>endo-1,4-beta-glucanase</topic><topic>Energy consumption</topic><topic>Enzyme Stability</topic><topic>Enzymes</topic><topic>Ethanol</topic><topic>ethanol production</topic><topic>Fungi</topic><topic>Genetic recombination</topic><topic>Genomes</topic><topic>Hydrogen-Ion Concentration</topic><topic>Hydrolysis</topic><topic>industrial applications</topic><topic>Kinetics</topic><topic>Life Sciences</topic><topic>Lignocellulose</topic><topic>Microbial Genetics and Genomics</topic><topic>Microbiology</topic><topic>Morphology</topic><topic>oats</topic><topic>Phosphates</topic><topic>Phosphoric acid</topic><topic>Recombinant Proteins - chemistry</topic><topic>Recombinant Proteins - genetics</topic><topic>Recombinant Proteins - metabolism</topic><topic>rye</topic><topic>scanning electron microscopy</topic><topic>Studies</topic><topic>Substrate Specificity</topic><topic>Substrates</topic><topic>Temperature</topic><topic>thermal stability</topic><topic>Trichoderma - enzymology</topic><topic>Trichoderma - genetics</topic><topic>Trichoderma harzianum</topic><topic>xylan</topic><topic>xyloglucans</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Pellegrini, Vanessa O. 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A</au><au>Serpa, Viviane Isabel</au><au>Godoy, Andre S</au><au>Camilo, Cesar M</au><au>Bernardes, Amanda</au><au>Rezende, Camila A</au><au>Junior, Nei Pereira</au><au>Franco Cairo, João Paulo L</au><au>Squina, Fabio M</au><au>Polikarpov, Igor</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Recombinant Trichoderma harzianum endoglucanase I (Cel7B) is a highly acidic and promiscuous carbohydrate-active enzyme</atitle><jtitle>Applied microbiology and biotechnology</jtitle><stitle>Appl Microbiol Biotechnol</stitle><addtitle>Appl Microbiol Biotechnol</addtitle><date>2015-11-01</date><risdate>2015</risdate><volume>99</volume><issue>22</issue><spage>9591</spage><epage>9604</epage><pages>9591-9604</pages><issn>0175-7598</issn><eissn>1432-0614</eissn><abstract>Trichoderma filamentous fungi have been investigated due to their ability to secrete cellulases which find various biotechnological applications such as biomass hydrolysis and cellulosic ethanol production. Previous studies demonstrated that Trichoderma harzianum IOC-3844 has a high degree of cellulolytic activity and potential for biomass hydrolysis. However, enzymatic, biochemical, and structural studies of cellulases from T. harzianum are scarce. This work reports biochemical characterization of the recombinant endoglucanase I from T. harzianum, ThCel7B, and its catalytic core domain. The constructs display optimum activity at 55 °C and a surprisingly acidic pH optimum of 3.0. The full-length enzyme is able to hydrolyze a variety of substrates, with high specific activity: 75 U/mg for β-glucan, 46 U/mg toward xyloglucan, 39 U/mg for lichenan, 26 U/mg for carboxymethyl cellulose, 18 U/mg for 4-nitrophenyl β-D-cellobioside, 16 U/mg for rye arabinoxylan, and 12 U/mg toward xylan. The enzyme also hydrolyzed filter paper, phosphoric acid swollen cellulose, Sigmacell 20, Avicel PH-101, and cellulose, albeit with lower efficiency. The ThCel7B catalytic domain displays similar substrate diversity. Fluorescence-based thermal shift assays showed that thermal stability is highest at pH 5.0. We determined kinetic parameters and analyzed a pattern of oligosaccharide substrates hydrolysis, revealing cellobiose as a final product of C6 degradation. Finally, we visualized effects of ThCel7B on oat spelt using scanning electron microscopy, demonstrating the morphological changes of the substrate during the hydrolysis. The acidic behavior of ThCel7B and its considerable thermostability hold a promise of its industrial applications and other biotechnological uses under extremely acidic conditions.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer Berlin Heidelberg</pub><pmid>26156238</pmid><doi>10.1007/s00253-015-6772-1</doi><tpages>14</tpages></addata></record> |
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subjects | active sites Analysis arabinoxylan beta-glucans Biodiesel fuels bioethanol Biofuels Biomass Biomedical and Life Sciences Biotechnologically Relevant Enzymes and Proteins Biotechnology Carbohydrate Metabolism carboxymethylcellulose cellobiose Cellulase Cellulases - chemistry Cellulases - genetics Cellulases - metabolism Cellulose Cellulose - metabolism Cloning endo-1,4-beta-glucanase Energy consumption Enzyme Stability Enzymes Ethanol ethanol production Fungi Genetic recombination Genomes Hydrogen-Ion Concentration Hydrolysis industrial applications Kinetics Life Sciences Lignocellulose Microbial Genetics and Genomics Microbiology Morphology oats Phosphates Phosphoric acid Recombinant Proteins - chemistry Recombinant Proteins - genetics Recombinant Proteins - metabolism rye scanning electron microscopy Studies Substrate Specificity Substrates Temperature thermal stability Trichoderma - enzymology Trichoderma - genetics Trichoderma harzianum xylan xyloglucans |
title | Recombinant Trichoderma harzianum endoglucanase I (Cel7B) is a highly acidic and promiscuous carbohydrate-active enzyme |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-27T17%3A22%3A31IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-gale_proqu&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Recombinant%20Trichoderma%20harzianum%20endoglucanase%20I%20(Cel7B)%20is%20a%20highly%20acidic%20and%20promiscuous%20carbohydrate-active%20enzyme&rft.jtitle=Applied%20microbiology%20and%20biotechnology&rft.au=Pellegrini,%20Vanessa%20O.%20A&rft.date=2015-11-01&rft.volume=99&rft.issue=22&rft.spage=9591&rft.epage=9604&rft.pages=9591-9604&rft.issn=0175-7598&rft.eissn=1432-0614&rft_id=info:doi/10.1007/s00253-015-6772-1&rft_dat=%3Cgale_proqu%3EA433220330%3C/gale_proqu%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=1728358298&rft_id=info:pmid/26156238&rft_galeid=A433220330&rfr_iscdi=true |