Recombinant Trichoderma harzianum endoglucanase I (Cel7B) is a highly acidic and promiscuous carbohydrate-active enzyme

Trichoderma filamentous fungi have been investigated due to their ability to secrete cellulases which find various biotechnological applications such as biomass hydrolysis and cellulosic ethanol production. Previous studies demonstrated that Trichoderma harzianum IOC-3844 has a high degree of cellul...

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Veröffentlicht in:Applied microbiology and biotechnology 2015-11, Vol.99 (22), p.9591-9604
Hauptverfasser: Pellegrini, Vanessa O. A, Serpa, Viviane Isabel, Godoy, Andre S, Camilo, Cesar M, Bernardes, Amanda, Rezende, Camila A, Junior, Nei Pereira, Franco Cairo, João Paulo L, Squina, Fabio M, Polikarpov, Igor
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container_end_page 9604
container_issue 22
container_start_page 9591
container_title Applied microbiology and biotechnology
container_volume 99
creator Pellegrini, Vanessa O. A
Serpa, Viviane Isabel
Godoy, Andre S
Camilo, Cesar M
Bernardes, Amanda
Rezende, Camila A
Junior, Nei Pereira
Franco Cairo, João Paulo L
Squina, Fabio M
Polikarpov, Igor
description Trichoderma filamentous fungi have been investigated due to their ability to secrete cellulases which find various biotechnological applications such as biomass hydrolysis and cellulosic ethanol production. Previous studies demonstrated that Trichoderma harzianum IOC-3844 has a high degree of cellulolytic activity and potential for biomass hydrolysis. However, enzymatic, biochemical, and structural studies of cellulases from T. harzianum are scarce. This work reports biochemical characterization of the recombinant endoglucanase I from T. harzianum, ThCel7B, and its catalytic core domain. The constructs display optimum activity at 55 °C and a surprisingly acidic pH optimum of 3.0. The full-length enzyme is able to hydrolyze a variety of substrates, with high specific activity: 75 U/mg for β-glucan, 46 U/mg toward xyloglucan, 39 U/mg for lichenan, 26 U/mg for carboxymethyl cellulose, 18 U/mg for 4-nitrophenyl β-D-cellobioside, 16 U/mg for rye arabinoxylan, and 12 U/mg toward xylan. The enzyme also hydrolyzed filter paper, phosphoric acid swollen cellulose, Sigmacell 20, Avicel PH-101, and cellulose, albeit with lower efficiency. The ThCel7B catalytic domain displays similar substrate diversity. Fluorescence-based thermal shift assays showed that thermal stability is highest at pH 5.0. We determined kinetic parameters and analyzed a pattern of oligosaccharide substrates hydrolysis, revealing cellobiose as a final product of C6 degradation. Finally, we visualized effects of ThCel7B on oat spelt using scanning electron microscopy, demonstrating the morphological changes of the substrate during the hydrolysis. The acidic behavior of ThCel7B and its considerable thermostability hold a promise of its industrial applications and other biotechnological uses under extremely acidic conditions.
doi_str_mv 10.1007/s00253-015-6772-1
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A ; Serpa, Viviane Isabel ; Godoy, Andre S ; Camilo, Cesar M ; Bernardes, Amanda ; Rezende, Camila A ; Junior, Nei Pereira ; Franco Cairo, João Paulo L ; Squina, Fabio M ; Polikarpov, Igor</creator><creatorcontrib>Pellegrini, Vanessa O. A ; Serpa, Viviane Isabel ; Godoy, Andre S ; Camilo, Cesar M ; Bernardes, Amanda ; Rezende, Camila A ; Junior, Nei Pereira ; Franco Cairo, João Paulo L ; Squina, Fabio M ; Polikarpov, Igor</creatorcontrib><description>Trichoderma filamentous fungi have been investigated due to their ability to secrete cellulases which find various biotechnological applications such as biomass hydrolysis and cellulosic ethanol production. Previous studies demonstrated that Trichoderma harzianum IOC-3844 has a high degree of cellulolytic activity and potential for biomass hydrolysis. However, enzymatic, biochemical, and structural studies of cellulases from T. harzianum are scarce. This work reports biochemical characterization of the recombinant endoglucanase I from T. harzianum, ThCel7B, and its catalytic core domain. The constructs display optimum activity at 55 °C and a surprisingly acidic pH optimum of 3.0. The full-length enzyme is able to hydrolyze a variety of substrates, with high specific activity: 75 U/mg for β-glucan, 46 U/mg toward xyloglucan, 39 U/mg for lichenan, 26 U/mg for carboxymethyl cellulose, 18 U/mg for 4-nitrophenyl β-D-cellobioside, 16 U/mg for rye arabinoxylan, and 12 U/mg toward xylan. The enzyme also hydrolyzed filter paper, phosphoric acid swollen cellulose, Sigmacell 20, Avicel PH-101, and cellulose, albeit with lower efficiency. The ThCel7B catalytic domain displays similar substrate diversity. Fluorescence-based thermal shift assays showed that thermal stability is highest at pH 5.0. We determined kinetic parameters and analyzed a pattern of oligosaccharide substrates hydrolysis, revealing cellobiose as a final product of C6 degradation. Finally, we visualized effects of ThCel7B on oat spelt using scanning electron microscopy, demonstrating the morphological changes of the substrate during the hydrolysis. 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A</creatorcontrib><creatorcontrib>Serpa, Viviane Isabel</creatorcontrib><creatorcontrib>Godoy, Andre S</creatorcontrib><creatorcontrib>Camilo, Cesar M</creatorcontrib><creatorcontrib>Bernardes, Amanda</creatorcontrib><creatorcontrib>Rezende, Camila A</creatorcontrib><creatorcontrib>Junior, Nei Pereira</creatorcontrib><creatorcontrib>Franco Cairo, João Paulo L</creatorcontrib><creatorcontrib>Squina, Fabio M</creatorcontrib><creatorcontrib>Polikarpov, Igor</creatorcontrib><title>Recombinant Trichoderma harzianum endoglucanase I (Cel7B) is a highly acidic and promiscuous carbohydrate-active enzyme</title><title>Applied microbiology and biotechnology</title><addtitle>Appl Microbiol Biotechnol</addtitle><addtitle>Appl Microbiol Biotechnol</addtitle><description>Trichoderma filamentous fungi have been investigated due to their ability to secrete cellulases which find various biotechnological applications such as biomass hydrolysis and cellulosic ethanol production. 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The acidic behavior of ThCel7B and its considerable thermostability hold a promise of its industrial applications and other biotechnological uses under extremely acidic conditions.</description><subject>active sites</subject><subject>Analysis</subject><subject>arabinoxylan</subject><subject>beta-glucans</subject><subject>Biodiesel fuels</subject><subject>bioethanol</subject><subject>Biofuels</subject><subject>Biomass</subject><subject>Biomedical and Life Sciences</subject><subject>Biotechnologically Relevant Enzymes and Proteins</subject><subject>Biotechnology</subject><subject>Carbohydrate Metabolism</subject><subject>carboxymethylcellulose</subject><subject>cellobiose</subject><subject>Cellulase</subject><subject>Cellulases - chemistry</subject><subject>Cellulases - genetics</subject><subject>Cellulases - metabolism</subject><subject>Cellulose</subject><subject>Cellulose - metabolism</subject><subject>Cloning</subject><subject>endo-1,4-beta-glucanase</subject><subject>Energy consumption</subject><subject>Enzyme Stability</subject><subject>Enzymes</subject><subject>Ethanol</subject><subject>ethanol production</subject><subject>Fungi</subject><subject>Genetic recombination</subject><subject>Genomes</subject><subject>Hydrogen-Ion Concentration</subject><subject>Hydrolysis</subject><subject>industrial applications</subject><subject>Kinetics</subject><subject>Life Sciences</subject><subject>Lignocellulose</subject><subject>Microbial Genetics and Genomics</subject><subject>Microbiology</subject><subject>Morphology</subject><subject>oats</subject><subject>Phosphates</subject><subject>Phosphoric acid</subject><subject>Recombinant Proteins - chemistry</subject><subject>Recombinant Proteins - genetics</subject><subject>Recombinant Proteins - metabolism</subject><subject>rye</subject><subject>scanning electron microscopy</subject><subject>Studies</subject><subject>Substrate Specificity</subject><subject>Substrates</subject><subject>Temperature</subject><subject>thermal stability</subject><subject>Trichoderma - enzymology</subject><subject>Trichoderma - genetics</subject><subject>Trichoderma harzianum</subject><subject>xylan</subject><subject>xyloglucans</subject><issn>0175-7598</issn><issn>1432-0614</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>BENPR</sourceid><recordid>eNqNkktv1DAUhSMEokPhB7CBSGzaRYrfTpZlVGCkSkh9rK07znXGVR7FTqDTX4_DlMcghJAXlny_c3SudbLsJSUnlBD9NhLCJC8IlYXSmhX0UbaggrOCKCoeZwtCtSy0rMqD7FmMN4RQVir1NDtgikrFeLnIvl6gHbq176Ef86vg7WaoMXSQbyDce-inLse-Hpp2stBDxHyVHy2x1e-Ocx_zhPlm025zsL72Noe-zm_D0Plop2GKuYWwHjbbOsCIBdjRf8Fkd7_t8Hn2xEEb8cXDfZhdvz-7Wn4szj99WC1PzwuruB4LWVOnrUUlNVBhSwEUWQUlKFROYamlc1IwBVKqSq1t6ZyoElTVKGgpGD_Mjna-KdbnCeNo5nDYttBjSmio5rJiTBD1H-j8exVVM_rmD_RmmEKfFvlOcVmyqvxFNdCi8b0bxgB2NjWngnPGCOckUSd_odKpsfN26NH59L4nON4TJGbEu7GBKUazurzYZ-mOtWGIMaAzt8F3ELaGEjN3yOw6ZFKHzNwhQ5Pm1cNy07rD-qfiR2kSwHZATKO-wfDb9v9wfb0TORgMNMFHc33JCFVkRgWh_Bt8qdeF</recordid><startdate>20151101</startdate><enddate>20151101</enddate><creator>Pellegrini, Vanessa O. 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A ; Serpa, Viviane Isabel ; Godoy, Andre S ; Camilo, Cesar M ; Bernardes, Amanda ; Rezende, Camila A ; Junior, Nei Pereira ; Franco Cairo, João Paulo L ; Squina, Fabio M ; Polikarpov, Igor</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c637t-5d1f7cce657a14c84a1e29a8a6e6f6e875ff5426a55696bc8ff494a19de418423</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>active sites</topic><topic>Analysis</topic><topic>arabinoxylan</topic><topic>beta-glucans</topic><topic>Biodiesel fuels</topic><topic>bioethanol</topic><topic>Biofuels</topic><topic>Biomass</topic><topic>Biomedical and Life Sciences</topic><topic>Biotechnologically Relevant Enzymes and Proteins</topic><topic>Biotechnology</topic><topic>Carbohydrate Metabolism</topic><topic>carboxymethylcellulose</topic><topic>cellobiose</topic><topic>Cellulase</topic><topic>Cellulases - chemistry</topic><topic>Cellulases - genetics</topic><topic>Cellulases - metabolism</topic><topic>Cellulose</topic><topic>Cellulose - metabolism</topic><topic>Cloning</topic><topic>endo-1,4-beta-glucanase</topic><topic>Energy consumption</topic><topic>Enzyme Stability</topic><topic>Enzymes</topic><topic>Ethanol</topic><topic>ethanol production</topic><topic>Fungi</topic><topic>Genetic recombination</topic><topic>Genomes</topic><topic>Hydrogen-Ion Concentration</topic><topic>Hydrolysis</topic><topic>industrial applications</topic><topic>Kinetics</topic><topic>Life Sciences</topic><topic>Lignocellulose</topic><topic>Microbial Genetics and Genomics</topic><topic>Microbiology</topic><topic>Morphology</topic><topic>oats</topic><topic>Phosphates</topic><topic>Phosphoric acid</topic><topic>Recombinant Proteins - chemistry</topic><topic>Recombinant Proteins - genetics</topic><topic>Recombinant Proteins - metabolism</topic><topic>rye</topic><topic>scanning electron microscopy</topic><topic>Studies</topic><topic>Substrate Specificity</topic><topic>Substrates</topic><topic>Temperature</topic><topic>thermal stability</topic><topic>Trichoderma - enzymology</topic><topic>Trichoderma - genetics</topic><topic>Trichoderma harzianum</topic><topic>xylan</topic><topic>xyloglucans</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Pellegrini, Vanessa O. 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A</au><au>Serpa, Viviane Isabel</au><au>Godoy, Andre S</au><au>Camilo, Cesar M</au><au>Bernardes, Amanda</au><au>Rezende, Camila A</au><au>Junior, Nei Pereira</au><au>Franco Cairo, João Paulo L</au><au>Squina, Fabio M</au><au>Polikarpov, Igor</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Recombinant Trichoderma harzianum endoglucanase I (Cel7B) is a highly acidic and promiscuous carbohydrate-active enzyme</atitle><jtitle>Applied microbiology and biotechnology</jtitle><stitle>Appl Microbiol Biotechnol</stitle><addtitle>Appl Microbiol Biotechnol</addtitle><date>2015-11-01</date><risdate>2015</risdate><volume>99</volume><issue>22</issue><spage>9591</spage><epage>9604</epage><pages>9591-9604</pages><issn>0175-7598</issn><eissn>1432-0614</eissn><abstract>Trichoderma filamentous fungi have been investigated due to their ability to secrete cellulases which find various biotechnological applications such as biomass hydrolysis and cellulosic ethanol production. Previous studies demonstrated that Trichoderma harzianum IOC-3844 has a high degree of cellulolytic activity and potential for biomass hydrolysis. However, enzymatic, biochemical, and structural studies of cellulases from T. harzianum are scarce. This work reports biochemical characterization of the recombinant endoglucanase I from T. harzianum, ThCel7B, and its catalytic core domain. The constructs display optimum activity at 55 °C and a surprisingly acidic pH optimum of 3.0. The full-length enzyme is able to hydrolyze a variety of substrates, with high specific activity: 75 U/mg for β-glucan, 46 U/mg toward xyloglucan, 39 U/mg for lichenan, 26 U/mg for carboxymethyl cellulose, 18 U/mg for 4-nitrophenyl β-D-cellobioside, 16 U/mg for rye arabinoxylan, and 12 U/mg toward xylan. The enzyme also hydrolyzed filter paper, phosphoric acid swollen cellulose, Sigmacell 20, Avicel PH-101, and cellulose, albeit with lower efficiency. The ThCel7B catalytic domain displays similar substrate diversity. Fluorescence-based thermal shift assays showed that thermal stability is highest at pH 5.0. We determined kinetic parameters and analyzed a pattern of oligosaccharide substrates hydrolysis, revealing cellobiose as a final product of C6 degradation. Finally, we visualized effects of ThCel7B on oat spelt using scanning electron microscopy, demonstrating the morphological changes of the substrate during the hydrolysis. The acidic behavior of ThCel7B and its considerable thermostability hold a promise of its industrial applications and other biotechnological uses under extremely acidic conditions.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer Berlin Heidelberg</pub><pmid>26156238</pmid><doi>10.1007/s00253-015-6772-1</doi><tpages>14</tpages></addata></record>
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source MEDLINE; SpringerLink Journals - AutoHoldings
subjects active sites
Analysis
arabinoxylan
beta-glucans
Biodiesel fuels
bioethanol
Biofuels
Biomass
Biomedical and Life Sciences
Biotechnologically Relevant Enzymes and Proteins
Biotechnology
Carbohydrate Metabolism
carboxymethylcellulose
cellobiose
Cellulase
Cellulases - chemistry
Cellulases - genetics
Cellulases - metabolism
Cellulose
Cellulose - metabolism
Cloning
endo-1,4-beta-glucanase
Energy consumption
Enzyme Stability
Enzymes
Ethanol
ethanol production
Fungi
Genetic recombination
Genomes
Hydrogen-Ion Concentration
Hydrolysis
industrial applications
Kinetics
Life Sciences
Lignocellulose
Microbial Genetics and Genomics
Microbiology
Morphology
oats
Phosphates
Phosphoric acid
Recombinant Proteins - chemistry
Recombinant Proteins - genetics
Recombinant Proteins - metabolism
rye
scanning electron microscopy
Studies
Substrate Specificity
Substrates
Temperature
thermal stability
Trichoderma - enzymology
Trichoderma - genetics
Trichoderma harzianum
xylan
xyloglucans
title Recombinant Trichoderma harzianum endoglucanase I (Cel7B) is a highly acidic and promiscuous carbohydrate-active enzyme
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-27T17%3A22%3A31IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-gale_proqu&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Recombinant%20Trichoderma%20harzianum%20endoglucanase%20I%20(Cel7B)%20is%20a%20highly%20acidic%20and%20promiscuous%20carbohydrate-active%20enzyme&rft.jtitle=Applied%20microbiology%20and%20biotechnology&rft.au=Pellegrini,%20Vanessa%20O.%20A&rft.date=2015-11-01&rft.volume=99&rft.issue=22&rft.spage=9591&rft.epage=9604&rft.pages=9591-9604&rft.issn=0175-7598&rft.eissn=1432-0614&rft_id=info:doi/10.1007/s00253-015-6772-1&rft_dat=%3Cgale_proqu%3EA433220330%3C/gale_proqu%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=1728358298&rft_id=info:pmid/26156238&rft_galeid=A433220330&rfr_iscdi=true