Localization of QTLs for tolerance to Cercospora beticola on sugar beet linkage groups
We present a new linkage map for sugar beet (Beta vulgaris) which has been developed using a population segregating for genetic factors that confer tolerance to the leaf spot fungus (Cercospora beticola), the causal factor of leaf spot disease in sugar beet). In the F(2) population studied, a subset...
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| Veröffentlicht in: | Theoretical and applied genetics 1999-09, Vol.99 (5), p.829-836 |
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| creator | Schafer-Pregl, R Borchardt, D.C Barzen, E Glass, C Mechelke, W Seitzer, J.F Salamini, F |
| description | We present a new linkage map for sugar beet (Beta vulgaris) which has been developed using a population segregating for genetic factors that confer tolerance to the leaf spot fungus (Cercospora beticola), the causal factor of leaf spot disease in sugar beet). In the F(2) population studied, a subset of 36 RFLP probes, mapping on eight out of the nine linkage groups of sugar beet, provided the anchor markers to assign chromosomes. A total of 224 markers, including RFLPs, AFLPs, SCARs and microsatellites, were mapped. Estimates of leaf damage in F(2) and test-cross families were repeated at different stages of plant development. Each set of data was analysed as such. An average estimate was also considered. QTLs with highly significant LOD scores revealed both by the F(2) and test-cross analyses were localized on linkage groups 2, 6 and 9. Linkage groups 4 and 5 gave a clear indication of the presence of a QTL only when F(2) data were considered. One highly significant QTL with a LOD of 16.0 was revealed only by the data obtained under conditions of artificial inoculation. This QTL maps at position 90 on chromosome 3. |
| doi_str_mv | 10.1007/s001220051302 |
| format | Article |
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In the F(2) population studied, a subset of 36 RFLP probes, mapping on eight out of the nine linkage groups of sugar beet, provided the anchor markers to assign chromosomes. A total of 224 markers, including RFLPs, AFLPs, SCARs and microsatellites, were mapped. Estimates of leaf damage in F(2) and test-cross families were repeated at different stages of plant development. Each set of data was analysed as such. An average estimate was also considered. QTLs with highly significant LOD scores revealed both by the F(2) and test-cross analyses were localized on linkage groups 2, 6 and 9. Linkage groups 4 and 5 gave a clear indication of the presence of a QTL only when F(2) data were considered. One highly significant QTL with a LOD of 16.0 was revealed only by the data obtained under conditions of artificial inoculation. This QTL maps at position 90 on chromosome 3.</description><identifier>ISSN: 0040-5752</identifier><identifier>EISSN: 1432-2242</identifier><identifier>DOI: 10.1007/s001220051302</identifier><identifier>CODEN: THAGA6</identifier><language>eng</language><publisher>Heidelberg: Springer</publisher><subject>amplified fragment length polymorphism ; Beta vulgaris ; Beta vulgaris subsp. vulgaris ; Biological and medical sciences ; Cercospora beticola ; Chromosome mapping ; Classical genetics, quantitative genetics, hybrids ; disease resistance ; Estimates ; Fundamental and applied biological sciences. Psychology ; fungal diseases of plants ; Fungi ; Genetic aspects ; genetic markers ; Genetics of eukaryotes. Biological and molecular evolution ; Identification and classification ; leaf spotting ; Linkage (Genetics) ; linkage groups ; Localization ; loci ; microsatellite repeats ; Plant genetics ; Plant immunology ; Polymorphism ; Pteridophyta, spermatophyta ; Quantitative trait loci ; quantitative traits ; restriction fragment length polymorphism ; sequence characterized amplified regions ; Sugar beet ; tolerance ; Vegetals</subject><ispartof>Theoretical and applied genetics, 1999-09, Vol.99 (5), p.829-836</ispartof><rights>1999 INIST-CNRS</rights><rights>COPYRIGHT 1999 Springer</rights><rights>Springer-Verlag Berlin Heidelberg 1999</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c446t-6ea97cdd1fbda6a430f074e220445df4bcf51768eb45106e774f825a8933c8163</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27924,27925</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=1957063$$DView record in Pascal Francis$$Hfree_for_read</backlink></links><search><creatorcontrib>Schafer-Pregl, R</creatorcontrib><creatorcontrib>Borchardt, D.C</creatorcontrib><creatorcontrib>Barzen, E</creatorcontrib><creatorcontrib>Glass, C</creatorcontrib><creatorcontrib>Mechelke, W</creatorcontrib><creatorcontrib>Seitzer, J.F</creatorcontrib><creatorcontrib>Salamini, F</creatorcontrib><title>Localization of QTLs for tolerance to Cercospora beticola on sugar beet linkage groups</title><title>Theoretical and applied genetics</title><description>We present a new linkage map for sugar beet (Beta vulgaris) which has been developed using a population segregating for genetic factors that confer tolerance to the leaf spot fungus (Cercospora beticola), the causal factor of leaf spot disease in sugar beet). In the F(2) population studied, a subset of 36 RFLP probes, mapping on eight out of the nine linkage groups of sugar beet, provided the anchor markers to assign chromosomes. A total of 224 markers, including RFLPs, AFLPs, SCARs and microsatellites, were mapped. Estimates of leaf damage in F(2) and test-cross families were repeated at different stages of plant development. Each set of data was analysed as such. An average estimate was also considered. QTLs with highly significant LOD scores revealed both by the F(2) and test-cross analyses were localized on linkage groups 2, 6 and 9. Linkage groups 4 and 5 gave a clear indication of the presence of a QTL only when F(2) data were considered. One highly significant QTL with a LOD of 16.0 was revealed only by the data obtained under conditions of artificial inoculation. This QTL maps at position 90 on chromosome 3.</description><subject>amplified fragment length polymorphism</subject><subject>Beta vulgaris</subject><subject>Beta vulgaris subsp. vulgaris</subject><subject>Biological and medical sciences</subject><subject>Cercospora beticola</subject><subject>Chromosome mapping</subject><subject>Classical genetics, quantitative genetics, hybrids</subject><subject>disease resistance</subject><subject>Estimates</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>fungal diseases of plants</subject><subject>Fungi</subject><subject>Genetic aspects</subject><subject>genetic markers</subject><subject>Genetics of eukaryotes. Biological and molecular evolution</subject><subject>Identification and classification</subject><subject>leaf spotting</subject><subject>Linkage (Genetics)</subject><subject>linkage groups</subject><subject>Localization</subject><subject>loci</subject><subject>microsatellite repeats</subject><subject>Plant genetics</subject><subject>Plant immunology</subject><subject>Polymorphism</subject><subject>Pteridophyta, spermatophyta</subject><subject>Quantitative trait loci</subject><subject>quantitative traits</subject><subject>restriction fragment length polymorphism</subject><subject>sequence characterized amplified regions</subject><subject>Sugar beet</subject><subject>tolerance</subject><subject>Vegetals</subject><issn>0040-5752</issn><issn>1432-2242</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1999</creationdate><recordtype>article</recordtype><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNpd0d9LHDEQB_AgFbyqj31ukFLwYXXya7P7KEdrhYPSqn0Nc7lkWbtuzswuqH99c5xQ2qeE8Mkw8x3GPgi4EAD2kgCElABGKJAHbCG0kpWUWr5jCwANlbFGHrH3RA8AIA2oBfu1Sh6H_hWnPo08Rf7jbkU8psynNISMow_lxpch-0TblJGvw9T7NCAvnuYOc3kJEx_68Td2gXc5zVs6YYcRBwqnb-cxu__65W75rVp9v75ZXq0qr3U9VXXA1vrNRsT1BmvUCiJYHcoQWptN1GsfjbB1E9baCKiDtTo20mDTKuUbUatj9nlfd5vT0xxoco89-TAMOIY0kxNWqcbUtsCz_-BDmvNYenONNo0QJaaCzveowyG4fvRpnMLz1OFM5G5uf7orBcKY0lJbbLW3PieiHKLb5v4R84sT4HbrcP-so_hPbw0glcTjLtqe_n5qjYVaFfZxzyImh10u5P5Wwq5EKxohW_UH09WQgg</recordid><startdate>19990901</startdate><enddate>19990901</enddate><creator>Schafer-Pregl, R</creator><creator>Borchardt, D.C</creator><creator>Barzen, E</creator><creator>Glass, C</creator><creator>Mechelke, W</creator><creator>Seitzer, J.F</creator><creator>Salamini, F</creator><general>Springer</general><general>Springer Nature B.V</general><scope>FBQ</scope><scope>IQODW</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>ISR</scope><scope>3V.</scope><scope>7SS</scope><scope>7TK</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>RC3</scope></search><sort><creationdate>19990901</creationdate><title>Localization of QTLs for tolerance to Cercospora beticola on sugar beet linkage groups</title><author>Schafer-Pregl, R ; Borchardt, D.C ; Barzen, E ; Glass, C ; Mechelke, W ; Seitzer, J.F ; Salamini, F</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c446t-6ea97cdd1fbda6a430f074e220445df4bcf51768eb45106e774f825a8933c8163</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1999</creationdate><topic>amplified fragment length polymorphism</topic><topic>Beta vulgaris</topic><topic>Beta vulgaris subsp. vulgaris</topic><topic>Biological and medical sciences</topic><topic>Cercospora beticola</topic><topic>Chromosome mapping</topic><topic>Classical genetics, quantitative genetics, hybrids</topic><topic>disease resistance</topic><topic>Estimates</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>fungal diseases of plants</topic><topic>Fungi</topic><topic>Genetic aspects</topic><topic>genetic markers</topic><topic>Genetics of eukaryotes. Biological and molecular evolution</topic><topic>Identification and classification</topic><topic>leaf spotting</topic><topic>Linkage (Genetics)</topic><topic>linkage groups</topic><topic>Localization</topic><topic>loci</topic><topic>microsatellite repeats</topic><topic>Plant genetics</topic><topic>Plant immunology</topic><topic>Polymorphism</topic><topic>Pteridophyta, spermatophyta</topic><topic>Quantitative trait loci</topic><topic>quantitative traits</topic><topic>restriction fragment length polymorphism</topic><topic>sequence characterized amplified regions</topic><topic>Sugar beet</topic><topic>tolerance</topic><topic>Vegetals</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Schafer-Pregl, R</creatorcontrib><creatorcontrib>Borchardt, D.C</creatorcontrib><creatorcontrib>Barzen, E</creatorcontrib><creatorcontrib>Glass, C</creatorcontrib><creatorcontrib>Mechelke, W</creatorcontrib><creatorcontrib>Seitzer, J.F</creatorcontrib><creatorcontrib>Salamini, F</creatorcontrib><collection>AGRIS</collection><collection>Pascal-Francis</collection><collection>CrossRef</collection><collection>Gale In Context: Science</collection><collection>ProQuest Central (Corporate)</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Neurosciences Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>Genetics Abstracts</collection><jtitle>Theoretical and applied genetics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Schafer-Pregl, R</au><au>Borchardt, D.C</au><au>Barzen, E</au><au>Glass, C</au><au>Mechelke, W</au><au>Seitzer, J.F</au><au>Salamini, F</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Localization of QTLs for tolerance to Cercospora beticola on sugar beet linkage groups</atitle><jtitle>Theoretical and applied genetics</jtitle><date>1999-09-01</date><risdate>1999</risdate><volume>99</volume><issue>5</issue><spage>829</spage><epage>836</epage><pages>829-836</pages><issn>0040-5752</issn><eissn>1432-2242</eissn><coden>THAGA6</coden><abstract>We present a new linkage map for sugar beet (Beta vulgaris) which has been developed using a population segregating for genetic factors that confer tolerance to the leaf spot fungus (Cercospora beticola), the causal factor of leaf spot disease in sugar beet). In the F(2) population studied, a subset of 36 RFLP probes, mapping on eight out of the nine linkage groups of sugar beet, provided the anchor markers to assign chromosomes. A total of 224 markers, including RFLPs, AFLPs, SCARs and microsatellites, were mapped. Estimates of leaf damage in F(2) and test-cross families were repeated at different stages of plant development. Each set of data was analysed as such. An average estimate was also considered. QTLs with highly significant LOD scores revealed both by the F(2) and test-cross analyses were localized on linkage groups 2, 6 and 9. Linkage groups 4 and 5 gave a clear indication of the presence of a QTL only when F(2) data were considered. One highly significant QTL with a LOD of 16.0 was revealed only by the data obtained under conditions of artificial inoculation. This QTL maps at position 90 on chromosome 3.</abstract><cop>Heidelberg</cop><cop>Berlin</cop><pub>Springer</pub><doi>10.1007/s001220051302</doi><tpages>8</tpages></addata></record> |
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| ispartof | Theoretical and applied genetics, 1999-09, Vol.99 (5), p.829-836 |
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| subjects | amplified fragment length polymorphism Beta vulgaris Beta vulgaris subsp. vulgaris Biological and medical sciences Cercospora beticola Chromosome mapping Classical genetics, quantitative genetics, hybrids disease resistance Estimates Fundamental and applied biological sciences. Psychology fungal diseases of plants Fungi Genetic aspects genetic markers Genetics of eukaryotes. Biological and molecular evolution Identification and classification leaf spotting Linkage (Genetics) linkage groups Localization loci microsatellite repeats Plant genetics Plant immunology Polymorphism Pteridophyta, spermatophyta Quantitative trait loci quantitative traits restriction fragment length polymorphism sequence characterized amplified regions Sugar beet tolerance Vegetals |
| title | Localization of QTLs for tolerance to Cercospora beticola on sugar beet linkage groups |
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