Molecular genotyping of “Rizor” and “Holly” rhizomania resistances in sugar beet
Rhizomania is the most damaging and widespread disease of the sugar beet crop and is caused by Beet necrotic yellow vein virus vectored by the fungus Polymyxa betae. The only disease management tool used is resistant varieties. In the last 30 years, “Rizor” and “Holly” (Rz1) resistances have been th...
Gespeichert in:
Veröffentlicht in: | Euphytica 2015-11, Vol.206 (2), p.427-431 |
---|---|
Hauptverfasser: | , , , , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | 431 |
---|---|
container_issue | 2 |
container_start_page | 427 |
container_title | Euphytica |
container_volume | 206 |
creator | Stevanato, Piergiorgio De Biaggi, Marco Broccanello, Chiara Biancardi, Enrico Saccomani, Massimo |
description | Rhizomania is the most damaging and widespread disease of the sugar beet crop and is caused by Beet necrotic yellow vein virus vectored by the fungus Polymyxa betae. The only disease management tool used is resistant varieties. In the last 30 years, “Rizor” and “Holly” (Rz1) resistances have been the most widely used. Despite the lack of information, a common origin for both types of resistance was hypothesized by some breeders. The aim of this study was to assess the phylogenetic relationship between Rizor and Rz1 by means of SNP analysis. Fifty leaf samples of each were genotyped with a fingerprinting panel of 192 SNPs, using the QuantStudio 12K Flex system coupled with Taqman OpenArray technology. Analysis of molecular variance and principal coordinate analysis confirmed that Rizor and Rz1 cannot be distinguished as separate sources of resistance. |
doi_str_mv | 10.1007/s10681-015-1503-3 |
format | Article |
fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_1732840196</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>3915237321</sourcerecordid><originalsourceid>FETCH-LOGICAL-c509t-1bdd585bc9dfd3a8707fcab7eaa9a62b54788e94e2a96e1c280893416a315ac83</originalsourceid><addsrcrecordid>eNp9kc2K1UAQhRtR8Dr6AK4MuHGTsSqd_lvKoI4wg6AOuGsqnU7MkNt97U4W19U8iL7cPIl9iQtx4ao41HcOxSnGniOcI4B6nRGkxhpQ1CiA1_wB26FQvBYg4SHbAWBbN5zLx-xJzrcAYJSAHft6HWfv1plSNfoQl-NhCmMVh-r-7uen6UdM93e_Kgr9SV_GeT6edPpWNnsKE1XJ5ykvFJzP1RSqvI4lqfN-ecoeDTRn_-zPPGM3795-ubisrz6-_3Dx5qp2AsxSY9f3QovOmX7oOWkFanDUKU9kSDadaJXW3rS-ISM9ukaDNrxFSRwFOc3P2Kst95Di99Xnxe6n7Pw8U_BxzRYVb3QLaGRBX_6D3sY1hXJdoUQrueHCFAo3yqWYc_KDPaRpT-loEeypa7t1bUvX9tS15cXTbJ5c2DD69Ffyf0wvNtNA0dKYpmxvPjeAsvyqUUZw_hvpD44o</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1754639359</pqid></control><display><type>article</type><title>Molecular genotyping of “Rizor” and “Holly” rhizomania resistances in sugar beet</title><source>SpringerLink Journals (MCLS)</source><creator>Stevanato, Piergiorgio ; De Biaggi, Marco ; Broccanello, Chiara ; Biancardi, Enrico ; Saccomani, Massimo</creator><creatorcontrib>Stevanato, Piergiorgio ; De Biaggi, Marco ; Broccanello, Chiara ; Biancardi, Enrico ; Saccomani, Massimo</creatorcontrib><description>Rhizomania is the most damaging and widespread disease of the sugar beet crop and is caused by Beet necrotic yellow vein virus vectored by the fungus Polymyxa betae. The only disease management tool used is resistant varieties. In the last 30 years, “Rizor” and “Holly” (Rz1) resistances have been the most widely used. Despite the lack of information, a common origin for both types of resistance was hypothesized by some breeders. The aim of this study was to assess the phylogenetic relationship between Rizor and Rz1 by means of SNP analysis. Fifty leaf samples of each were genotyped with a fingerprinting panel of 192 SNPs, using the QuantStudio 12K Flex system coupled with Taqman OpenArray technology. Analysis of molecular variance and principal coordinate analysis confirmed that Rizor and Rz1 cannot be distinguished as separate sources of resistance.</description><identifier>ISSN: 0014-2336</identifier><identifier>EISSN: 1573-5060</identifier><identifier>DOI: 10.1007/s10681-015-1503-3</identifier><language>eng</language><publisher>Dordrecht: Springer Netherlands</publisher><subject>Beet necrotic yellow vein virus ; Biomedical and Life Sciences ; Biotechnology ; disease control ; fungi ; Genotype & phenotype ; genotyping ; leaves ; Life Sciences ; Molecular biology ; phylogeny ; plant breeding ; Plant diseases ; Plant Genetics and Genomics ; Plant Pathology ; Plant Physiology ; Plant populations ; Plant resistance ; Plant Sciences ; Polymyxa betae ; rhizomania ; single nucleotide polymorphism ; Sugar ; sugar beet ; variance</subject><ispartof>Euphytica, 2015-11, Vol.206 (2), p.427-431</ispartof><rights>Springer Science+Business Media Dordrecht 2015</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c509t-1bdd585bc9dfd3a8707fcab7eaa9a62b54788e94e2a96e1c280893416a315ac83</citedby><cites>FETCH-LOGICAL-c509t-1bdd585bc9dfd3a8707fcab7eaa9a62b54788e94e2a96e1c280893416a315ac83</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s10681-015-1503-3$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s10681-015-1503-3$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27901,27902,41464,42533,51294</link.rule.ids></links><search><creatorcontrib>Stevanato, Piergiorgio</creatorcontrib><creatorcontrib>De Biaggi, Marco</creatorcontrib><creatorcontrib>Broccanello, Chiara</creatorcontrib><creatorcontrib>Biancardi, Enrico</creatorcontrib><creatorcontrib>Saccomani, Massimo</creatorcontrib><title>Molecular genotyping of “Rizor” and “Holly” rhizomania resistances in sugar beet</title><title>Euphytica</title><addtitle>Euphytica</addtitle><description>Rhizomania is the most damaging and widespread disease of the sugar beet crop and is caused by Beet necrotic yellow vein virus vectored by the fungus Polymyxa betae. The only disease management tool used is resistant varieties. In the last 30 years, “Rizor” and “Holly” (Rz1) resistances have been the most widely used. Despite the lack of information, a common origin for both types of resistance was hypothesized by some breeders. The aim of this study was to assess the phylogenetic relationship between Rizor and Rz1 by means of SNP analysis. Fifty leaf samples of each were genotyped with a fingerprinting panel of 192 SNPs, using the QuantStudio 12K Flex system coupled with Taqman OpenArray technology. Analysis of molecular variance and principal coordinate analysis confirmed that Rizor and Rz1 cannot be distinguished as separate sources of resistance.</description><subject>Beet necrotic yellow vein virus</subject><subject>Biomedical and Life Sciences</subject><subject>Biotechnology</subject><subject>disease control</subject><subject>fungi</subject><subject>Genotype & phenotype</subject><subject>genotyping</subject><subject>leaves</subject><subject>Life Sciences</subject><subject>Molecular biology</subject><subject>phylogeny</subject><subject>plant breeding</subject><subject>Plant diseases</subject><subject>Plant Genetics and Genomics</subject><subject>Plant Pathology</subject><subject>Plant Physiology</subject><subject>Plant populations</subject><subject>Plant resistance</subject><subject>Plant Sciences</subject><subject>Polymyxa betae</subject><subject>rhizomania</subject><subject>single nucleotide polymorphism</subject><subject>Sugar</subject><subject>sugar beet</subject><subject>variance</subject><issn>0014-2336</issn><issn>1573-5060</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><sourceid>BENPR</sourceid><recordid>eNp9kc2K1UAQhRtR8Dr6AK4MuHGTsSqd_lvKoI4wg6AOuGsqnU7MkNt97U4W19U8iL7cPIl9iQtx4ao41HcOxSnGniOcI4B6nRGkxhpQ1CiA1_wB26FQvBYg4SHbAWBbN5zLx-xJzrcAYJSAHft6HWfv1plSNfoQl-NhCmMVh-r-7uen6UdM93e_Kgr9SV_GeT6edPpWNnsKE1XJ5ykvFJzP1RSqvI4lqfN-ecoeDTRn_-zPPGM3795-ubisrz6-_3Dx5qp2AsxSY9f3QovOmX7oOWkFanDUKU9kSDadaJXW3rS-ISM9ukaDNrxFSRwFOc3P2Kst95Di99Xnxe6n7Pw8U_BxzRYVb3QLaGRBX_6D3sY1hXJdoUQrueHCFAo3yqWYc_KDPaRpT-loEeypa7t1bUvX9tS15cXTbJ5c2DD69Ffyf0wvNtNA0dKYpmxvPjeAsvyqUUZw_hvpD44o</recordid><startdate>20151101</startdate><enddate>20151101</enddate><creator>Stevanato, Piergiorgio</creator><creator>De Biaggi, Marco</creator><creator>Broccanello, Chiara</creator><creator>Biancardi, Enrico</creator><creator>Saccomani, Massimo</creator><general>Springer Netherlands</general><general>Springer Nature B.V</general><scope>FBQ</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7SN</scope><scope>7SS</scope><scope>7T7</scope><scope>7TM</scope><scope>7X2</scope><scope>7XB</scope><scope>88I</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>M0K</scope><scope>M2P</scope><scope>M7N</scope><scope>P64</scope><scope>PATMY</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PYCSY</scope><scope>Q9U</scope><scope>RC3</scope></search><sort><creationdate>20151101</creationdate><title>Molecular genotyping of “Rizor” and “Holly” rhizomania resistances in sugar beet</title><author>Stevanato, Piergiorgio ; De Biaggi, Marco ; Broccanello, Chiara ; Biancardi, Enrico ; Saccomani, Massimo</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c509t-1bdd585bc9dfd3a8707fcab7eaa9a62b54788e94e2a96e1c280893416a315ac83</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>Beet necrotic yellow vein virus</topic><topic>Biomedical and Life Sciences</topic><topic>Biotechnology</topic><topic>disease control</topic><topic>fungi</topic><topic>Genotype & phenotype</topic><topic>genotyping</topic><topic>leaves</topic><topic>Life Sciences</topic><topic>Molecular biology</topic><topic>phylogeny</topic><topic>plant breeding</topic><topic>Plant diseases</topic><topic>Plant Genetics and Genomics</topic><topic>Plant Pathology</topic><topic>Plant Physiology</topic><topic>Plant populations</topic><topic>Plant resistance</topic><topic>Plant Sciences</topic><topic>Polymyxa betae</topic><topic>rhizomania</topic><topic>single nucleotide polymorphism</topic><topic>Sugar</topic><topic>sugar beet</topic><topic>variance</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Stevanato, Piergiorgio</creatorcontrib><creatorcontrib>De Biaggi, Marco</creatorcontrib><creatorcontrib>Broccanello, Chiara</creatorcontrib><creatorcontrib>Biancardi, Enrico</creatorcontrib><creatorcontrib>Saccomani, Massimo</creatorcontrib><collection>AGRIS</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Nucleic Acids Abstracts</collection><collection>Agricultural Science Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Science Database (Alumni Edition)</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>Agricultural Science Database</collection><collection>Science Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Environmental Science Database</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>Environmental Science Collection</collection><collection>ProQuest Central Basic</collection><collection>Genetics Abstracts</collection><jtitle>Euphytica</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Stevanato, Piergiorgio</au><au>De Biaggi, Marco</au><au>Broccanello, Chiara</au><au>Biancardi, Enrico</au><au>Saccomani, Massimo</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Molecular genotyping of “Rizor” and “Holly” rhizomania resistances in sugar beet</atitle><jtitle>Euphytica</jtitle><stitle>Euphytica</stitle><date>2015-11-01</date><risdate>2015</risdate><volume>206</volume><issue>2</issue><spage>427</spage><epage>431</epage><pages>427-431</pages><issn>0014-2336</issn><eissn>1573-5060</eissn><abstract>Rhizomania is the most damaging and widespread disease of the sugar beet crop and is caused by Beet necrotic yellow vein virus vectored by the fungus Polymyxa betae. The only disease management tool used is resistant varieties. In the last 30 years, “Rizor” and “Holly” (Rz1) resistances have been the most widely used. Despite the lack of information, a common origin for both types of resistance was hypothesized by some breeders. The aim of this study was to assess the phylogenetic relationship between Rizor and Rz1 by means of SNP analysis. Fifty leaf samples of each were genotyped with a fingerprinting panel of 192 SNPs, using the QuantStudio 12K Flex system coupled with Taqman OpenArray technology. Analysis of molecular variance and principal coordinate analysis confirmed that Rizor and Rz1 cannot be distinguished as separate sources of resistance.</abstract><cop>Dordrecht</cop><pub>Springer Netherlands</pub><doi>10.1007/s10681-015-1503-3</doi><tpages>5</tpages></addata></record> |
fulltext | fulltext |
identifier | ISSN: 0014-2336 |
ispartof | Euphytica, 2015-11, Vol.206 (2), p.427-431 |
issn | 0014-2336 1573-5060 |
language | eng |
recordid | cdi_proquest_miscellaneous_1732840196 |
source | SpringerLink Journals (MCLS) |
subjects | Beet necrotic yellow vein virus Biomedical and Life Sciences Biotechnology disease control fungi Genotype & phenotype genotyping leaves Life Sciences Molecular biology phylogeny plant breeding Plant diseases Plant Genetics and Genomics Plant Pathology Plant Physiology Plant populations Plant resistance Plant Sciences Polymyxa betae rhizomania single nucleotide polymorphism Sugar sugar beet variance |
title | Molecular genotyping of “Rizor” and “Holly” rhizomania resistances in sugar beet |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-29T20%3A48%3A20IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Molecular%20genotyping%20of%20%E2%80%9CRizor%E2%80%9D%20and%20%E2%80%9CHolly%E2%80%9D%20rhizomania%20resistances%20in%20sugar%20beet&rft.jtitle=Euphytica&rft.au=Stevanato,%20Piergiorgio&rft.date=2015-11-01&rft.volume=206&rft.issue=2&rft.spage=427&rft.epage=431&rft.pages=427-431&rft.issn=0014-2336&rft.eissn=1573-5060&rft_id=info:doi/10.1007/s10681-015-1503-3&rft_dat=%3Cproquest_cross%3E3915237321%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=1754639359&rft_id=info:pmid/&rfr_iscdi=true |