Population Structure and Development of Resistance to Hymexazol Among Fusarium solani Populations from Date Palm, Citrus and Cucumber
A study was conducted to investigate genetic diversity and sensitivity to hymexazol among 80 isolates of Fusarium solani complex obtained from date palm (30), citrus (31) and cucumber (19). Characterization based on sequences of the EF1α and ITS rRNA showed that isolates belong to F. solani complex...
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Veröffentlicht in: | Journal of phytopathology 2015-12, Vol.163 (11-12), p.947-955 |
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creator | Al‐Sadi, Abdullah M Al‐Masoodi, Ruqaya S Al‐Ismaili, Majid Al‐Mahmooli, Issa H |
description | A study was conducted to investigate genetic diversity and sensitivity to hymexazol among 80 isolates of Fusarium solani complex obtained from date palm (30), citrus (31) and cucumber (19). Characterization based on sequences of the EF1α and ITS rRNA showed that isolates belong to F. solani complex MLST type 3 + 4. AFLP analysis produced 980 polymorphic loci, 80 AFLP genotypes and moderate levels of genetic diversity (H = 0.2494). Clustering of the isolates was not related to the host or the geographical origin of the isolates. Analysis of molecular variance (amova) indicated the existence of a low level of genetic differentiation among populations obtained from different hosts (Fₛₜ = 0.0162) and regions (Fₛₜ = 0.0066). This may provide evidence for frequent movement of inoculum among hosts and regions in Oman, which could be attributed to cultural practices employed by farmers. Isolates of F. solani displayed variation in sensitivity to hymexazol, with EC₅₀ values ranging from 2 to 5745 μg/ml (mean = 878 μg/ml); 19% of the isolates have an EC₅₀ value of more than 1000 μg/ml. Findings are discussed in terms of the factors that affect diversity in F. solani isolates. The study reports for the first time the development of resistance to hymexazol among F. solani isolates from date palm, citrus and cucumber. |
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Characterization based on sequences of the EF1α and ITS rRNA showed that isolates belong to F. solani complex MLST type 3 + 4. AFLP analysis produced 980 polymorphic loci, 80 AFLP genotypes and moderate levels of genetic diversity (H = 0.2494). Clustering of the isolates was not related to the host or the geographical origin of the isolates. Analysis of molecular variance (amova) indicated the existence of a low level of genetic differentiation among populations obtained from different hosts (Fₛₜ = 0.0162) and regions (Fₛₜ = 0.0066). This may provide evidence for frequent movement of inoculum among hosts and regions in Oman, which could be attributed to cultural practices employed by farmers. Isolates of F. solani displayed variation in sensitivity to hymexazol, with EC₅₀ values ranging from 2 to 5745 μg/ml (mean = 878 μg/ml); 19% of the isolates have an EC₅₀ value of more than 1000 μg/ml. Findings are discussed in terms of the factors that affect diversity in F. solani isolates. The study reports for the first time the development of resistance to hymexazol among F. solani isolates from date palm, citrus and cucumber.</description><identifier>ISSN: 0931-1785</identifier><identifier>EISSN: 1439-0434</identifier><identifier>DOI: 10.1111/jph.12397</identifier><language>eng</language><publisher>Berlin: Parey</publisher><subject>AFLP fingerprinting ; amplified fragment length polymorphism ; Citrus ; cucumbers ; farmers ; fungicide resistance ; Fusarium solani ; genetic variation ; genotype ; hosts ; hymexazol ; inoculum ; internal transcribed spacers ; loci ; Phoenix dactylifera ; phylogenetic analysis ; population ; population structure ; provenance ; ribosomal RNA ; variance</subject><ispartof>Journal of phytopathology, 2015-12, Vol.163 (11-12), p.947-955</ispartof><rights>2015 Blackwell Verlag GmbH</rights><rights>Copyright © 2015 Blackwell Verlag GmbH</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4627-9572d43d5a2b81a516fdbc3a990014ddad5f7bdb690da9a8adc141ba9bc398773</citedby><cites>FETCH-LOGICAL-c4627-9572d43d5a2b81a516fdbc3a990014ddad5f7bdb690da9a8adc141ba9bc398773</cites><orcidid>0000-0002-3419-8268</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1111%2Fjph.12397$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1111%2Fjph.12397$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,776,780,1411,27901,27902,45550,45551</link.rule.ids></links><search><creatorcontrib>Al‐Sadi, Abdullah M</creatorcontrib><creatorcontrib>Al‐Masoodi, Ruqaya S</creatorcontrib><creatorcontrib>Al‐Ismaili, Majid</creatorcontrib><creatorcontrib>Al‐Mahmooli, Issa H</creatorcontrib><title>Population Structure and Development of Resistance to Hymexazol Among Fusarium solani Populations from Date Palm, Citrus and Cucumber</title><title>Journal of phytopathology</title><addtitle>J Phytopathol</addtitle><description>A study was conducted to investigate genetic diversity and sensitivity to hymexazol among 80 isolates of Fusarium solani complex obtained from date palm (30), citrus (31) and cucumber (19). Characterization based on sequences of the EF1α and ITS rRNA showed that isolates belong to F. solani complex MLST type 3 + 4. AFLP analysis produced 980 polymorphic loci, 80 AFLP genotypes and moderate levels of genetic diversity (H = 0.2494). Clustering of the isolates was not related to the host or the geographical origin of the isolates. Analysis of molecular variance (amova) indicated the existence of a low level of genetic differentiation among populations obtained from different hosts (Fₛₜ = 0.0162) and regions (Fₛₜ = 0.0066). This may provide evidence for frequent movement of inoculum among hosts and regions in Oman, which could be attributed to cultural practices employed by farmers. Isolates of F. solani displayed variation in sensitivity to hymexazol, with EC₅₀ values ranging from 2 to 5745 μg/ml (mean = 878 μg/ml); 19% of the isolates have an EC₅₀ value of more than 1000 μg/ml. Findings are discussed in terms of the factors that affect diversity in F. solani isolates. The study reports for the first time the development of resistance to hymexazol among F. solani isolates from date palm, citrus and cucumber.</description><subject>AFLP fingerprinting</subject><subject>amplified fragment length polymorphism</subject><subject>Citrus</subject><subject>cucumbers</subject><subject>farmers</subject><subject>fungicide resistance</subject><subject>Fusarium solani</subject><subject>genetic variation</subject><subject>genotype</subject><subject>hosts</subject><subject>hymexazol</subject><subject>inoculum</subject><subject>internal transcribed spacers</subject><subject>loci</subject><subject>Phoenix dactylifera</subject><subject>phylogenetic analysis</subject><subject>population</subject><subject>population structure</subject><subject>provenance</subject><subject>ribosomal RNA</subject><subject>variance</subject><issn>0931-1785</issn><issn>1439-0434</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><recordid>eNp10ctu1DAUBuAIgcRQWPAEWGIDEml9SxwvqynTARUYOlRlZ53ETvGQxMGOocOe98ZtuEhIeOPNdy72n2WPCT4k6Rztxk-HhDIp7mQLwpnMMWf8brbAkpGciKq4nz0IYYcxxQzjRfZj48bYwWTdgLaTj80UvUEwaHRivprOjb0ZJuRadG6CDRMMjUGTQ-t9b67hu-vQce-GK7SKAbyNPQqug8Giv10Dar3r0QlMBm2g61-gpU1zwu2MZWxiXxv_MLvXQhfMo1_3QXaxevlhuc7P3p2-Wh6f5Q0vqchlIajmTBdA64pAQcpW1w0DKTEmXGvQRStqXZcSa5BQgW4IJzXIhGQlBDvIns19R---RBMm1dvQmC7tbFwMighGK8opLRJ9-g_dueiHtF1StCwrVrEb9XxWjXcheNOq0dse_F4RrG4CUSkQdRtIskez_WY7s_8_VK83698V-VyRft5c_6kA_1mVgolCXb49VW9WW_7x_fZSnSf_ZPYtOAVX3gZ1saWYFCnu9KSKsZ-dbqb7</recordid><startdate>201512</startdate><enddate>201512</enddate><creator>Al‐Sadi, Abdullah M</creator><creator>Al‐Masoodi, Ruqaya S</creator><creator>Al‐Ismaili, Majid</creator><creator>Al‐Mahmooli, Issa H</creator><general>Parey</general><general>Blackwell Publishing Ltd</general><general>Wiley Subscription Services, Inc</general><scope>FBQ</scope><scope>BSCLL</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>7T7</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>M7N</scope><scope>P64</scope><orcidid>https://orcid.org/0000-0002-3419-8268</orcidid></search><sort><creationdate>201512</creationdate><title>Population Structure and Development of Resistance to Hymexazol Among Fusarium solani Populations from Date Palm, Citrus and Cucumber</title><author>Al‐Sadi, Abdullah M ; Al‐Masoodi, Ruqaya S ; Al‐Ismaili, Majid ; Al‐Mahmooli, Issa H</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4627-9572d43d5a2b81a516fdbc3a990014ddad5f7bdb690da9a8adc141ba9bc398773</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>AFLP fingerprinting</topic><topic>amplified fragment length polymorphism</topic><topic>Citrus</topic><topic>cucumbers</topic><topic>farmers</topic><topic>fungicide resistance</topic><topic>Fusarium solani</topic><topic>genetic variation</topic><topic>genotype</topic><topic>hosts</topic><topic>hymexazol</topic><topic>inoculum</topic><topic>internal transcribed spacers</topic><topic>loci</topic><topic>Phoenix dactylifera</topic><topic>phylogenetic analysis</topic><topic>population</topic><topic>population structure</topic><topic>provenance</topic><topic>ribosomal RNA</topic><topic>variance</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Al‐Sadi, Abdullah M</creatorcontrib><creatorcontrib>Al‐Masoodi, Ruqaya S</creatorcontrib><creatorcontrib>Al‐Ismaili, Majid</creatorcontrib><creatorcontrib>Al‐Mahmooli, Issa H</creatorcontrib><collection>AGRIS</collection><collection>Istex</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><jtitle>Journal of phytopathology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Al‐Sadi, Abdullah M</au><au>Al‐Masoodi, Ruqaya S</au><au>Al‐Ismaili, Majid</au><au>Al‐Mahmooli, Issa H</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Population Structure and Development of Resistance to Hymexazol Among Fusarium solani Populations from Date Palm, Citrus and Cucumber</atitle><jtitle>Journal of phytopathology</jtitle><addtitle>J Phytopathol</addtitle><date>2015-12</date><risdate>2015</risdate><volume>163</volume><issue>11-12</issue><spage>947</spage><epage>955</epage><pages>947-955</pages><issn>0931-1785</issn><eissn>1439-0434</eissn><abstract>A study was conducted to investigate genetic diversity and sensitivity to hymexazol among 80 isolates of Fusarium solani complex obtained from date palm (30), citrus (31) and cucumber (19). Characterization based on sequences of the EF1α and ITS rRNA showed that isolates belong to F. solani complex MLST type 3 + 4. AFLP analysis produced 980 polymorphic loci, 80 AFLP genotypes and moderate levels of genetic diversity (H = 0.2494). Clustering of the isolates was not related to the host or the geographical origin of the isolates. Analysis of molecular variance (amova) indicated the existence of a low level of genetic differentiation among populations obtained from different hosts (Fₛₜ = 0.0162) and regions (Fₛₜ = 0.0066). This may provide evidence for frequent movement of inoculum among hosts and regions in Oman, which could be attributed to cultural practices employed by farmers. Isolates of F. solani displayed variation in sensitivity to hymexazol, with EC₅₀ values ranging from 2 to 5745 μg/ml (mean = 878 μg/ml); 19% of the isolates have an EC₅₀ value of more than 1000 μg/ml. Findings are discussed in terms of the factors that affect diversity in F. solani isolates. The study reports for the first time the development of resistance to hymexazol among F. solani isolates from date palm, citrus and cucumber.</abstract><cop>Berlin</cop><pub>Parey</pub><doi>10.1111/jph.12397</doi><tpages>9</tpages><orcidid>https://orcid.org/0000-0002-3419-8268</orcidid></addata></record> |
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subjects | AFLP fingerprinting amplified fragment length polymorphism Citrus cucumbers farmers fungicide resistance Fusarium solani genetic variation genotype hosts hymexazol inoculum internal transcribed spacers loci Phoenix dactylifera phylogenetic analysis population population structure provenance ribosomal RNA variance |
title | Population Structure and Development of Resistance to Hymexazol Among Fusarium solani Populations from Date Palm, Citrus and Cucumber |
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