Identification of differentially expressed microRNAs involved in non-traumatic osteonecrosis through microRNA expression profiling

Accumulating evidence has recently indicated a vital role of microRNAs (miRNAs) in the development of various bone diseases. However, the biological role of miRNAs in the pathogenesis of non-traumatic osteonecrosis of femoral head (ONFH) has not yet been investigated. The present study aimed to prof...

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Veröffentlicht in:Gene 2015-07, Vol.565 (1), p.22-29
Hauptverfasser: Wu, Xingjing, Zhang, Yongtao, Guo, Xiong, Xu, Hongguang, Xu, Zhujun, Duan, Dapeng, Wang, Kunzheng
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container_issue 1
container_start_page 22
container_title Gene
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creator Wu, Xingjing
Zhang, Yongtao
Guo, Xiong
Xu, Hongguang
Xu, Zhujun
Duan, Dapeng
Wang, Kunzheng
description Accumulating evidence has recently indicated a vital role of microRNAs (miRNAs) in the development of various bone diseases. However, the biological role of miRNAs in the pathogenesis of non-traumatic osteonecrosis of femoral head (ONFH) has not yet been investigated. The present study aimed to profile the differential miRNA expression between non-traumatic ONFH and femoral neck fracture and to develop further understanding of the molecular mechanisms involved in the pathogenesis of non-traumatic ONFH. Femoral heads from 4 patients with non-traumatic ONFH and 4 with femoral neck fracture were used to analyze the miRNA expression profiles in bone tissue using the Exiqon miRCURY™ LNA Array (v.18.0). The results of miRNA microarray analysis were further confirmed by real-time quantitative polymerase chain reaction (qPCR). The differentially expressed miRNA target genes and signaling pathways involved were predicted by bioinformatics analysis. MiRNA microarray chip analysis revealed that 22 miRNAs were significantly up-regulated and 17 were significantly down-regulated in the non-traumatic ONFH samples compared with the femoral neck fracture samples. The real-time qPCR also confirmed the microarray data. Bioinformatics analysis demonstrated that toll-like receptor (TLR), neurotrophin and NOD-like receptor signaling pathway were most likely to be regulated by these differential miRNAs. This miRNA microarray study reveals significant differences in miRNA expression between patients with non-traumatic ONFH and those with femoral neck fracture. Our data also manifests that the signaling pathways regulated by these differentially expressed miRNAs might be important in the pathogenesis of non-traumatic ONFH. •39 apparently aberrant miRNAs were screened out in the study.•Real-time qPCR verified the reliability of the microarray data.•Differential miRNAs regulated TLR, neurotrophin and NOD-like receptor pathway.•These dysregulated miRNAs may play important role in non-traumatic ONFH.
doi_str_mv 10.1016/j.gene.2015.03.072
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However, the biological role of miRNAs in the pathogenesis of non-traumatic osteonecrosis of femoral head (ONFH) has not yet been investigated. The present study aimed to profile the differential miRNA expression between non-traumatic ONFH and femoral neck fracture and to develop further understanding of the molecular mechanisms involved in the pathogenesis of non-traumatic ONFH. Femoral heads from 4 patients with non-traumatic ONFH and 4 with femoral neck fracture were used to analyze the miRNA expression profiles in bone tissue using the Exiqon miRCURY™ LNA Array (v.18.0). The results of miRNA microarray analysis were further confirmed by real-time quantitative polymerase chain reaction (qPCR). The differentially expressed miRNA target genes and signaling pathways involved were predicted by bioinformatics analysis. MiRNA microarray chip analysis revealed that 22 miRNAs were significantly up-regulated and 17 were significantly down-regulated in the non-traumatic ONFH samples compared with the femoral neck fracture samples. The real-time qPCR also confirmed the microarray data. Bioinformatics analysis demonstrated that toll-like receptor (TLR), neurotrophin and NOD-like receptor signaling pathway were most likely to be regulated by these differential miRNAs. This miRNA microarray study reveals significant differences in miRNA expression between patients with non-traumatic ONFH and those with femoral neck fracture. Our data also manifests that the signaling pathways regulated by these differentially expressed miRNAs might be important in the pathogenesis of non-traumatic ONFH. •39 apparently aberrant miRNAs were screened out in the study.•Real-time qPCR verified the reliability of the microarray data.•Differential miRNAs regulated TLR, neurotrophin and NOD-like receptor pathway.•These dysregulated miRNAs may play important role in non-traumatic ONFH.</description><identifier>ISSN: 0378-1119</identifier><identifier>EISSN: 1879-0038</identifier><identifier>DOI: 10.1016/j.gene.2015.03.072</identifier><identifier>PMID: 25863178</identifier><language>eng</language><publisher>Netherlands: Elsevier B.V</publisher><subject>Aged ; Female ; Femoral neck fracture ; Femoral Neck Fractures - genetics ; Femoral Neck Fractures - pathology ; Gene Expression Profiling - methods ; Gene Expression Regulation ; Humans ; Male ; Microarray ; MicroRNAs - genetics ; Middle Aged ; MiRNA ; Non-traumatic ONFH ; Oligonucleotide Array Sequence Analysis - methods ; Osteonecrosis - genetics ; Osteonecrosis - pathology ; Signal Transduction</subject><ispartof>Gene, 2015-07, Vol.565 (1), p.22-29</ispartof><rights>2015 Elsevier B.V.</rights><rights>Copyright © 2015 Elsevier B.V. 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However, the biological role of miRNAs in the pathogenesis of non-traumatic osteonecrosis of femoral head (ONFH) has not yet been investigated. The present study aimed to profile the differential miRNA expression between non-traumatic ONFH and femoral neck fracture and to develop further understanding of the molecular mechanisms involved in the pathogenesis of non-traumatic ONFH. Femoral heads from 4 patients with non-traumatic ONFH and 4 with femoral neck fracture were used to analyze the miRNA expression profiles in bone tissue using the Exiqon miRCURY™ LNA Array (v.18.0). The results of miRNA microarray analysis were further confirmed by real-time quantitative polymerase chain reaction (qPCR). The differentially expressed miRNA target genes and signaling pathways involved were predicted by bioinformatics analysis. 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Our data also manifests that the signaling pathways regulated by these differentially expressed miRNAs might be important in the pathogenesis of non-traumatic ONFH. •39 apparently aberrant miRNAs were screened out in the study.•Real-time qPCR verified the reliability of the microarray data.•Differential miRNAs regulated TLR, neurotrophin and NOD-like receptor pathway.•These dysregulated miRNAs may play important role in non-traumatic ONFH.</description><subject>Aged</subject><subject>Female</subject><subject>Femoral neck fracture</subject><subject>Femoral Neck Fractures - genetics</subject><subject>Femoral Neck Fractures - pathology</subject><subject>Gene Expression Profiling - methods</subject><subject>Gene Expression Regulation</subject><subject>Humans</subject><subject>Male</subject><subject>Microarray</subject><subject>MicroRNAs - genetics</subject><subject>Middle Aged</subject><subject>MiRNA</subject><subject>Non-traumatic ONFH</subject><subject>Oligonucleotide Array Sequence Analysis - methods</subject><subject>Osteonecrosis - genetics</subject><subject>Osteonecrosis - pathology</subject><subject>Signal Transduction</subject><issn>0378-1119</issn><issn>1879-0038</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkU1r3DAQhkVoSbZp_0APxcde7I4k68PQSwj9CIQWSnIWij3aaLGlrWQvybW_vDKb5NjOZWB43neYeQl5T6GhQOWnXbPFgA0DKhrgDSh2QjZUq64G4PoV2QBXuqaUdmfkTc47KCUEOyVnTGjJqdIb8udqwDB753s7-xiq6KrBO4dpndpxfKzwYZ8wZxyqyfcp_vpxkSsfDnE8lJEPVYihnpNdpmLQVzHPGAMWMPtczfcpLtv7F-Wz2bppn6Lzow_bt-S1s2PGd0_9nNx-_XJz-b2-_vnt6vLiuu5b0c01ldDjQIXgVqs7ZNx1VGhtRSsclwy1lK5zToKg1inb0YG3su04QMs1dIyfk49H37L594J5NpPPPY6jDRiXbKjiTINWbft_VCqltRKtLig7ouvJOaEz--Qnmx4NBbPGZHZmjcmsMRngpsRURB-e_Je7CYcXyXMuBfh8BLA85OAxmdx7DOUBPmE_myH6f_n_BQwipZ4</recordid><startdate>20150701</startdate><enddate>20150701</enddate><creator>Wu, Xingjing</creator><creator>Zhang, Yongtao</creator><creator>Guo, Xiong</creator><creator>Xu, Hongguang</creator><creator>Xu, Zhujun</creator><creator>Duan, Dapeng</creator><creator>Wang, Kunzheng</creator><general>Elsevier B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope></search><sort><creationdate>20150701</creationdate><title>Identification of differentially expressed microRNAs involved in non-traumatic osteonecrosis through microRNA expression profiling</title><author>Wu, Xingjing ; 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However, the biological role of miRNAs in the pathogenesis of non-traumatic osteonecrosis of femoral head (ONFH) has not yet been investigated. The present study aimed to profile the differential miRNA expression between non-traumatic ONFH and femoral neck fracture and to develop further understanding of the molecular mechanisms involved in the pathogenesis of non-traumatic ONFH. Femoral heads from 4 patients with non-traumatic ONFH and 4 with femoral neck fracture were used to analyze the miRNA expression profiles in bone tissue using the Exiqon miRCURY™ LNA Array (v.18.0). The results of miRNA microarray analysis were further confirmed by real-time quantitative polymerase chain reaction (qPCR). The differentially expressed miRNA target genes and signaling pathways involved were predicted by bioinformatics analysis. MiRNA microarray chip analysis revealed that 22 miRNAs were significantly up-regulated and 17 were significantly down-regulated in the non-traumatic ONFH samples compared with the femoral neck fracture samples. The real-time qPCR also confirmed the microarray data. Bioinformatics analysis demonstrated that toll-like receptor (TLR), neurotrophin and NOD-like receptor signaling pathway were most likely to be regulated by these differential miRNAs. This miRNA microarray study reveals significant differences in miRNA expression between patients with non-traumatic ONFH and those with femoral neck fracture. Our data also manifests that the signaling pathways regulated by these differentially expressed miRNAs might be important in the pathogenesis of non-traumatic ONFH. •39 apparently aberrant miRNAs were screened out in the study.•Real-time qPCR verified the reliability of the microarray data.•Differential miRNAs regulated TLR, neurotrophin and NOD-like receptor pathway.•These dysregulated miRNAs may play important role in non-traumatic ONFH.</abstract><cop>Netherlands</cop><pub>Elsevier B.V</pub><pmid>25863178</pmid><doi>10.1016/j.gene.2015.03.072</doi><tpages>8</tpages></addata></record>
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subjects Aged
Female
Femoral neck fracture
Femoral Neck Fractures - genetics
Femoral Neck Fractures - pathology
Gene Expression Profiling - methods
Gene Expression Regulation
Humans
Male
Microarray
MicroRNAs - genetics
Middle Aged
MiRNA
Non-traumatic ONFH
Oligonucleotide Array Sequence Analysis - methods
Osteonecrosis - genetics
Osteonecrosis - pathology
Signal Transduction
title Identification of differentially expressed microRNAs involved in non-traumatic osteonecrosis through microRNA expression profiling
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