Use of Targeted Glycoproteomics to Identify Serum Glycoproteins That Correlate with Liver Cancer in Woodchucks and Humans
Chronic infection with hepatitis B virus (HBV) is associated with the majority of hepatocellular carcinoma (HCC). The diagnosis of HCC is usually made in the late stages of the disease, when treatment options are limited and prognosis is poor. We therefore have developed a method of glycoproteomic a...
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creator | Block, Timothy M. Comunale, Mary Ann Lowman, Melissa Steel, Laura F. Romano, Patrick R. Fimmel, Claus Tennant, Bud C. London, W. Thomas Evans, Alison A. Blumberg, Baruch S. Dwek, Raymond A. Mattu, Tajinder S. Mehta, Anand S. |
description | Chronic infection with hepatitis B virus (HBV) is associated with the majority of hepatocellular carcinoma (HCC). The diagnosis of HCC is usually made in the late stages of the disease, when treatment options are limited and prognosis is poor. We therefore have developed a method of glycoproteomic analysis in an attempt to discover serum markers that can assist in the early detection of HBV-induced liver cancer. Briefly, a comparative method for analysis of oligosaccharides released from serum glycoproteins and for recovery and identification of proteins with aberrant glycosylation, as a function of cancer diagnosis, is described. The model we have used is the woodchuck (Marmota monax), which shares similarities in the glycosylation pattern associated with liver proteins in human HCC. In this report, we show that woodchucks diagnosed with HCC have dramatically higher levels of serum-associated core α-1,6-linked fucose, as compared with woodchucks without a diagnosis of HCC. The coupling of this methodology with 2D gel proteomics has permitted the identification of several glycoproteins with altered glycosylation as a function of cancer. One such glycoprotein, Golgi Protein 73 (GP73), was found to be elevated and hyperfucosylated in animals with HCC. Further, the study showed GP73 to be elevated in the serum of people with a diagnosis of HCC, providing a validation of our approach. The potential of this technology for biomarker discovery and the implications of increased levels of GP73 in liver cancer are discussed. |
doi_str_mv | 10.1073/pnas.0408928102 |
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Thomas ; Evans, Alison A. ; Blumberg, Baruch S. ; Dwek, Raymond A. ; Mattu, Tajinder S. ; Mehta, Anand S.</creator><creatorcontrib>Block, Timothy M. ; Comunale, Mary Ann ; Lowman, Melissa ; Steel, Laura F. ; Romano, Patrick R. ; Fimmel, Claus ; Tennant, Bud C. ; London, W. Thomas ; Evans, Alison A. ; Blumberg, Baruch S. ; Dwek, Raymond A. ; Mattu, Tajinder S. ; Mehta, Anand S.</creatorcontrib><description>Chronic infection with hepatitis B virus (HBV) is associated with the majority of hepatocellular carcinoma (HCC). The diagnosis of HCC is usually made in the late stages of the disease, when treatment options are limited and prognosis is poor. We therefore have developed a method of glycoproteomic analysis in an attempt to discover serum markers that can assist in the early detection of HBV-induced liver cancer. Briefly, a comparative method for analysis of oligosaccharides released from serum glycoproteins and for recovery and identification of proteins with aberrant glycosylation, as a function of cancer diagnosis, is described. The model we have used is the woodchuck (Marmota monax), which shares similarities in the glycosylation pattern associated with liver proteins in human HCC. In this report, we show that woodchucks diagnosed with HCC have dramatically higher levels of serum-associated core α-1,6-linked fucose, as compared with woodchucks without a diagnosis of HCC. The coupling of this methodology with 2D gel proteomics has permitted the identification of several glycoproteins with altered glycosylation as a function of cancer. One such glycoprotein, Golgi Protein 73 (GP73), was found to be elevated and hyperfucosylated in animals with HCC. Further, the study showed GP73 to be elevated in the serum of people with a diagnosis of HCC, providing a validation of our approach. The potential of this technology for biomarker discovery and the implications of increased levels of GP73 in liver cancer are discussed.</description><identifier>ISSN: 0027-8424</identifier><identifier>EISSN: 1091-6490</identifier><identifier>DOI: 10.1073/pnas.0408928102</identifier><identifier>PMID: 15642945</identifier><language>eng</language><publisher>United States: National Academy of Sciences</publisher><subject>Animals ; Biological markers ; Biological Sciences ; Biomarkers, Tumor - blood ; Cancer ; Carcinoma, Hepatocellular - diagnosis ; Colorectal cancer ; Electrophoresis, Gel, Two-Dimensional ; Fucose - analysis ; Gels ; Glycoproteins ; Glycoproteins - blood ; Glycoproteins - chemistry ; Glycosylation ; Hepatitis ; Hepatitis B virus ; Hepatocellular carcinoma ; Humans ; Infections ; Lectins ; Liver ; Liver cancer ; Marmota ; Medical research ; Membrane Proteins - blood ; Membrane Proteins - chemistry ; Oligosaccharides - analysis ; Polysaccharides ; Proteomics - methods ; Viruses</subject><ispartof>Proceedings of the National Academy of Sciences - PNAS, 2005-01, Vol.102 (3), p.779-784</ispartof><rights>Copyright 1993/2005 The National Academy of Sciences of the United States of America</rights><rights>Copyright National Academy of Sciences Jan 18, 2005</rights><rights>Copyright © 2005, The National Academy of Sciences 2005</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c522t-a1a5e1db3da080a2209b455cd46c78b08f55d55847763c34f72e3cd6c72625f53</citedby><cites>FETCH-LOGICAL-c522t-a1a5e1db3da080a2209b455cd46c78b08f55d55847763c34f72e3cd6c72625f53</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Uhttp://www.pnas.org/content/102/3.cover.gif</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/3374325$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/3374325$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>230,314,723,776,780,799,881,27903,27904,53770,53772,57996,58229</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/15642945$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Block, Timothy M.</creatorcontrib><creatorcontrib>Comunale, Mary Ann</creatorcontrib><creatorcontrib>Lowman, Melissa</creatorcontrib><creatorcontrib>Steel, Laura F.</creatorcontrib><creatorcontrib>Romano, Patrick R.</creatorcontrib><creatorcontrib>Fimmel, Claus</creatorcontrib><creatorcontrib>Tennant, Bud C.</creatorcontrib><creatorcontrib>London, W. Thomas</creatorcontrib><creatorcontrib>Evans, Alison A.</creatorcontrib><creatorcontrib>Blumberg, Baruch S.</creatorcontrib><creatorcontrib>Dwek, Raymond A.</creatorcontrib><creatorcontrib>Mattu, Tajinder S.</creatorcontrib><creatorcontrib>Mehta, Anand S.</creatorcontrib><title>Use of Targeted Glycoproteomics to Identify Serum Glycoproteins That Correlate with Liver Cancer in Woodchucks and Humans</title><title>Proceedings of the National Academy of Sciences - PNAS</title><addtitle>Proc Natl Acad Sci U S A</addtitle><description>Chronic infection with hepatitis B virus (HBV) is associated with the majority of hepatocellular carcinoma (HCC). The diagnosis of HCC is usually made in the late stages of the disease, when treatment options are limited and prognosis is poor. We therefore have developed a method of glycoproteomic analysis in an attempt to discover serum markers that can assist in the early detection of HBV-induced liver cancer. Briefly, a comparative method for analysis of oligosaccharides released from serum glycoproteins and for recovery and identification of proteins with aberrant glycosylation, as a function of cancer diagnosis, is described. The model we have used is the woodchuck (Marmota monax), which shares similarities in the glycosylation pattern associated with liver proteins in human HCC. In this report, we show that woodchucks diagnosed with HCC have dramatically higher levels of serum-associated core α-1,6-linked fucose, as compared with woodchucks without a diagnosis of HCC. The coupling of this methodology with 2D gel proteomics has permitted the identification of several glycoproteins with altered glycosylation as a function of cancer. One such glycoprotein, Golgi Protein 73 (GP73), was found to be elevated and hyperfucosylated in animals with HCC. Further, the study showed GP73 to be elevated in the serum of people with a diagnosis of HCC, providing a validation of our approach. The potential of this technology for biomarker discovery and the implications of increased levels of GP73 in liver cancer are discussed.</description><subject>Animals</subject><subject>Biological markers</subject><subject>Biological Sciences</subject><subject>Biomarkers, Tumor - blood</subject><subject>Cancer</subject><subject>Carcinoma, Hepatocellular - diagnosis</subject><subject>Colorectal cancer</subject><subject>Electrophoresis, Gel, Two-Dimensional</subject><subject>Fucose - analysis</subject><subject>Gels</subject><subject>Glycoproteins</subject><subject>Glycoproteins - blood</subject><subject>Glycoproteins - chemistry</subject><subject>Glycosylation</subject><subject>Hepatitis</subject><subject>Hepatitis B virus</subject><subject>Hepatocellular carcinoma</subject><subject>Humans</subject><subject>Infections</subject><subject>Lectins</subject><subject>Liver</subject><subject>Liver cancer</subject><subject>Marmota</subject><subject>Medical research</subject><subject>Membrane Proteins - blood</subject><subject>Membrane Proteins - chemistry</subject><subject>Oligosaccharides - analysis</subject><subject>Polysaccharides</subject><subject>Proteomics - methods</subject><subject>Viruses</subject><issn>0027-8424</issn><issn>1091-6490</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2005</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkb1vEzEYxi0EoqEwswCyGNjS-vPsGzqgCNpKkRhIxWg5tq9xuLOD7Svkv8dRoiYwwPQOz-95vx4AXmN0gZGgl5ug8wViSLZEYkSegAlGLZ42rEVPwQQhIqaSEXYGXuS8Rgi1XKLn4AzzhpGW8QnY3mUHYwcXOt274iy87rcmblIsLg7eZFgivLUuFN9t4VeXxuGE8CHDxUoXOIspuV4XB3_6soJz_-ASnOlgavEBfovRmtVovmeog4U346BDfgmedbrP7tWhnoO7z58Ws5vp_Mv17ezjfGo4IWWqseYO2yW1GkmkCUHtknFuLGuMkEskO84t55IJ0VBDWSeIo8ZWkTSEd5yeg6t93824HJw19Zake7VJftBpq6L26k8l-JW6jw-K1zG4qf4PB3-KP0aXixp8Nq7vdXBxzKoRVFLJ0H9BLCimRO7A93-B6zimUJ-gCMK0ZilohS73kEkx5-S6x40xUrvs1S57dcy-Ot6dHnrkD2GfLLhzHtsRRZUQrerGvi_uV6ng23-BVX-z19e5xPQIUCoYJZz-BkySzNg</recordid><startdate>20050118</startdate><enddate>20050118</enddate><creator>Block, Timothy M.</creator><creator>Comunale, Mary Ann</creator><creator>Lowman, Melissa</creator><creator>Steel, Laura F.</creator><creator>Romano, Patrick R.</creator><creator>Fimmel, Claus</creator><creator>Tennant, Bud C.</creator><creator>London, W. Thomas</creator><creator>Evans, Alison A.</creator><creator>Blumberg, Baruch S.</creator><creator>Dwek, Raymond A.</creator><creator>Mattu, Tajinder S.</creator><creator>Mehta, Anand S.</creator><general>National Academy of Sciences</general><general>National Acad Sciences</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QG</scope><scope>7QL</scope><scope>7QP</scope><scope>7QR</scope><scope>7SN</scope><scope>7SS</scope><scope>7T5</scope><scope>7TK</scope><scope>7TM</scope><scope>7TO</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20050118</creationdate><title>Use of Targeted Glycoproteomics to Identify Serum Glycoproteins That Correlate with Liver Cancer in Woodchucks and Humans</title><author>Block, Timothy M. ; Comunale, Mary Ann ; Lowman, Melissa ; Steel, Laura F. ; Romano, Patrick R. ; Fimmel, Claus ; Tennant, Bud C. ; London, W. 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Thomas</au><au>Evans, Alison A.</au><au>Blumberg, Baruch S.</au><au>Dwek, Raymond A.</au><au>Mattu, Tajinder S.</au><au>Mehta, Anand S.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Use of Targeted Glycoproteomics to Identify Serum Glycoproteins That Correlate with Liver Cancer in Woodchucks and Humans</atitle><jtitle>Proceedings of the National Academy of Sciences - PNAS</jtitle><addtitle>Proc Natl Acad Sci U S A</addtitle><date>2005-01-18</date><risdate>2005</risdate><volume>102</volume><issue>3</issue><spage>779</spage><epage>784</epage><pages>779-784</pages><issn>0027-8424</issn><eissn>1091-6490</eissn><abstract>Chronic infection with hepatitis B virus (HBV) is associated with the majority of hepatocellular carcinoma (HCC). The diagnosis of HCC is usually made in the late stages of the disease, when treatment options are limited and prognosis is poor. We therefore have developed a method of glycoproteomic analysis in an attempt to discover serum markers that can assist in the early detection of HBV-induced liver cancer. Briefly, a comparative method for analysis of oligosaccharides released from serum glycoproteins and for recovery and identification of proteins with aberrant glycosylation, as a function of cancer diagnosis, is described. The model we have used is the woodchuck (Marmota monax), which shares similarities in the glycosylation pattern associated with liver proteins in human HCC. In this report, we show that woodchucks diagnosed with HCC have dramatically higher levels of serum-associated core α-1,6-linked fucose, as compared with woodchucks without a diagnosis of HCC. The coupling of this methodology with 2D gel proteomics has permitted the identification of several glycoproteins with altered glycosylation as a function of cancer. One such glycoprotein, Golgi Protein 73 (GP73), was found to be elevated and hyperfucosylated in animals with HCC. Further, the study showed GP73 to be elevated in the serum of people with a diagnosis of HCC, providing a validation of our approach. The potential of this technology for biomarker discovery and the implications of increased levels of GP73 in liver cancer are discussed.</abstract><cop>United States</cop><pub>National Academy of Sciences</pub><pmid>15642945</pmid><doi>10.1073/pnas.0408928102</doi><tpages>6</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Animals Biological markers Biological Sciences Biomarkers, Tumor - blood Cancer Carcinoma, Hepatocellular - diagnosis Colorectal cancer Electrophoresis, Gel, Two-Dimensional Fucose - analysis Gels Glycoproteins Glycoproteins - blood Glycoproteins - chemistry Glycosylation Hepatitis Hepatitis B virus Hepatocellular carcinoma Humans Infections Lectins Liver Liver cancer Marmota Medical research Membrane Proteins - blood Membrane Proteins - chemistry Oligosaccharides - analysis Polysaccharides Proteomics - methods Viruses |
title | Use of Targeted Glycoproteomics to Identify Serum Glycoproteins That Correlate with Liver Cancer in Woodchucks and Humans |
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