A genome-wide association study of suicidal behavior
Genome wide array studies have reported limited success in identifying genetic markers conferring risk for suicidal behavior (SB). This may be attributable to study designs with primary outcome other than SB. We performed a GWAS on suicides and cases with a history of nonfatal suicide attempts compa...
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| Veröffentlicht in: | American journal of medical genetics. Part B, Neuropsychiatric genetics Neuropsychiatric genetics, 2015-10, Vol.168B (7), p.557-563 |
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| container_title | American journal of medical genetics. Part B, Neuropsychiatric genetics |
| container_volume | 168B |
| creator | Galfalvy, Hanga Haghighi, Fatemeh Hodgkinson, Colin Goldman, David Oquendo, Maria A. Burke, Ainsley Huang, Yung-yu Giegling, Ina Rujescu, Dan Bureau, Alexandre Turecki, Gustavo Mann, J. John |
| description | Genome wide array studies have reported limited success in identifying genetic markers conferring risk for suicidal behavior (SB). This may be attributable to study designs with primary outcome other than SB. We performed a GWAS on suicides and cases with a history of nonfatal suicide attempts compared with psychiatric controls and healthy volunteers. A consortium of USA, Canadian and German teams assembled two groups of cases (suicide attempters and suicides, N = 577) and non‐attempter psychiatric and healthy controls (N = 1,233). Logistic regression was used to test genotype‐suicidal behavior association. The test was repeated separating suicide attempt and completed suicide as outcomes. No SNP reached genome‐wide significance, but several SNPs within STK3, ADAMTS14, PSME2, and TBX20 genes reached P |
| doi_str_mv | 10.1002/ajmg.b.32330 |
| format | Article |
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John</creator><creatorcontrib>Galfalvy, Hanga ; Haghighi, Fatemeh ; Hodgkinson, Colin ; Goldman, David ; Oquendo, Maria A. ; Burke, Ainsley ; Huang, Yung-yu ; Giegling, Ina ; Rujescu, Dan ; Bureau, Alexandre ; Turecki, Gustavo ; Mann, J. John</creatorcontrib><description>Genome wide array studies have reported limited success in identifying genetic markers conferring risk for suicidal behavior (SB). This may be attributable to study designs with primary outcome other than SB. We performed a GWAS on suicides and cases with a history of nonfatal suicide attempts compared with psychiatric controls and healthy volunteers. A consortium of USA, Canadian and German teams assembled two groups of cases (suicide attempters and suicides, N = 577) and non‐attempter psychiatric and healthy controls (N = 1,233). Logistic regression was used to test genotype‐suicidal behavior association. The test was repeated separating suicide attempt and completed suicide as outcomes. No SNP reached genome‐wide significance, but several SNPs within STK3, ADAMTS14, PSME2, and TBX20 genes reached P < 1 × 10−5. The top SNPs for the suicide attempt analysis included two from DPP10, one from CTNNA3 and one from STK32B. In the suicide analysis we found seven SNPs from the TBX20 gene in the top hits. Pathway analysis identified the following pathways: “Cellular Assembly and Organization,” “Nervous System Development and Function,” “Cell Death and Survival,” “Immunological Disease,” “Infectious Disease,” and “Inflammatory Response.” The top genes in the SB analysis did not overlap with those in the ideation analysis. No genome wide significant results suggest that susceptibility to SB has genetic risk factors with smaller effect sizes. The strongest candidate genes, ADAMTS14, and PSME2 (both linked to inflammatory response), STK3 (neuronal cell death), and TBX20 (brainstem motor neuron development), have not been previously reported in association with suicide and warrant further study. © 2015 Wiley Periodicals, Inc.</description><identifier>ISSN: 1552-4841</identifier><identifier>EISSN: 1552-485X</identifier><identifier>DOI: 10.1002/ajmg.b.32330</identifier><identifier>PMID: 26079190</identifier><language>eng</language><publisher>United States: Blackwell Publishing Ltd</publisher><subject>Case-Control Studies ; Depressive Disorder, Major - genetics ; Female ; Genetic Markers - genetics ; Genetic Testing ; Genetics ; Genome-Wide Association Study - methods ; GWAS ; Humans ; immune response ; Male ; Mental Disorders - genetics ; Polymorphism, Single Nucleotide ; Risk Factors ; Suicidal Ideation ; Suicide ; suicide attempt ; Suicide, Attempted ; White People - genetics</subject><ispartof>American journal of medical genetics. Part B, Neuropsychiatric genetics, 2015-10, Vol.168B (7), p.557-563</ispartof><rights>2015 Wiley Periodicals, Inc.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c5710-8933ff36b84e4bcddb44a2f178fae7d4d1cfc6a3073aaa5482a821fb1ecf16523</citedby><cites>FETCH-LOGICAL-c5710-8933ff36b84e4bcddb44a2f178fae7d4d1cfc6a3073aaa5482a821fb1ecf16523</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1002%2Fajmg.b.32330$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1002%2Fajmg.b.32330$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,776,780,1411,27901,27902,45550,45551</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/26079190$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Galfalvy, Hanga</creatorcontrib><creatorcontrib>Haghighi, Fatemeh</creatorcontrib><creatorcontrib>Hodgkinson, Colin</creatorcontrib><creatorcontrib>Goldman, David</creatorcontrib><creatorcontrib>Oquendo, Maria A.</creatorcontrib><creatorcontrib>Burke, Ainsley</creatorcontrib><creatorcontrib>Huang, Yung-yu</creatorcontrib><creatorcontrib>Giegling, Ina</creatorcontrib><creatorcontrib>Rujescu, Dan</creatorcontrib><creatorcontrib>Bureau, Alexandre</creatorcontrib><creatorcontrib>Turecki, Gustavo</creatorcontrib><creatorcontrib>Mann, J. John</creatorcontrib><title>A genome-wide association study of suicidal behavior</title><title>American journal of medical genetics. Part B, Neuropsychiatric genetics</title><addtitle>Am. J. Med. Genet</addtitle><description>Genome wide array studies have reported limited success in identifying genetic markers conferring risk for suicidal behavior (SB). This may be attributable to study designs with primary outcome other than SB. We performed a GWAS on suicides and cases with a history of nonfatal suicide attempts compared with psychiatric controls and healthy volunteers. A consortium of USA, Canadian and German teams assembled two groups of cases (suicide attempters and suicides, N = 577) and non‐attempter psychiatric and healthy controls (N = 1,233). Logistic regression was used to test genotype‐suicidal behavior association. The test was repeated separating suicide attempt and completed suicide as outcomes. No SNP reached genome‐wide significance, but several SNPs within STK3, ADAMTS14, PSME2, and TBX20 genes reached P < 1 × 10−5. The top SNPs for the suicide attempt analysis included two from DPP10, one from CTNNA3 and one from STK32B. In the suicide analysis we found seven SNPs from the TBX20 gene in the top hits. Pathway analysis identified the following pathways: “Cellular Assembly and Organization,” “Nervous System Development and Function,” “Cell Death and Survival,” “Immunological Disease,” “Infectious Disease,” and “Inflammatory Response.” The top genes in the SB analysis did not overlap with those in the ideation analysis. No genome wide significant results suggest that susceptibility to SB has genetic risk factors with smaller effect sizes. The strongest candidate genes, ADAMTS14, and PSME2 (both linked to inflammatory response), STK3 (neuronal cell death), and TBX20 (brainstem motor neuron development), have not been previously reported in association with suicide and warrant further study. © 2015 Wiley Periodicals, Inc.</description><subject>Case-Control Studies</subject><subject>Depressive Disorder, Major - genetics</subject><subject>Female</subject><subject>Genetic Markers - genetics</subject><subject>Genetic Testing</subject><subject>Genetics</subject><subject>Genome-Wide Association Study - methods</subject><subject>GWAS</subject><subject>Humans</subject><subject>immune response</subject><subject>Male</subject><subject>Mental Disorders - genetics</subject><subject>Polymorphism, Single Nucleotide</subject><subject>Risk Factors</subject><subject>Suicidal Ideation</subject><subject>Suicide</subject><subject>suicide attempt</subject><subject>Suicide, Attempted</subject><subject>White People - genetics</subject><issn>1552-4841</issn><issn>1552-485X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqN0LtPwzAQBnALgXgUNmYUiYWBFJ_txO5YXgVEQUJFsFmOY4NLUkPcAP3vSZ8DA2K6G373SfchtA-4DRiTEzUsX9pZmxJK8RrahiQhMRPJ8_pqZ7CFdkIYYkxxwvkm2iIp5h3o4G3EutGLGfnSxF8uN5EKwWunxs6PojCu80nkbRRqp12uiigzr-rT-WoXbVhVBLO3mC30eHkxOLuKb-9712fd21gnHHAsOpRaS9NMMMMynecZY4pY4MIqw3OWg7Y6VRRzqpRKmCBKELAZGG0hTQhtoaN57nvlP2oTxrJ0QZuiUCPj6yCBEwJpykH8gwLuCCoYa-jhLzr0dTVqHpkpYILitFHHc6UrH0JlrHyvXKmqiQQsp8XLafEyk7PiG36wCK2z0uQrvGy6AWwOvlxhJn-Gye5Nv3e6zI3nZy6MzffqTFVvMuWUJ_LpricHrC8ebgaX8pz-AFe5nJc</recordid><startdate>201510</startdate><enddate>201510</enddate><creator>Galfalvy, Hanga</creator><creator>Haghighi, Fatemeh</creator><creator>Hodgkinson, Colin</creator><creator>Goldman, David</creator><creator>Oquendo, Maria A.</creator><creator>Burke, Ainsley</creator><creator>Huang, Yung-yu</creator><creator>Giegling, Ina</creator><creator>Rujescu, Dan</creator><creator>Bureau, Alexandre</creator><creator>Turecki, Gustavo</creator><creator>Mann, J. John</creator><general>Blackwell Publishing Ltd</general><general>Wiley Subscription Services, Inc</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7TK</scope><scope>8FD</scope><scope>FR3</scope><scope>K9.</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>201510</creationdate><title>A genome-wide association study of suicidal behavior</title><author>Galfalvy, Hanga ; Haghighi, Fatemeh ; Hodgkinson, Colin ; Goldman, David ; Oquendo, Maria A. ; Burke, Ainsley ; Huang, Yung-yu ; Giegling, Ina ; Rujescu, Dan ; Bureau, Alexandre ; Turecki, Gustavo ; Mann, J. John</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c5710-8933ff36b84e4bcddb44a2f178fae7d4d1cfc6a3073aaa5482a821fb1ecf16523</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>Case-Control Studies</topic><topic>Depressive Disorder, Major - genetics</topic><topic>Female</topic><topic>Genetic Markers - genetics</topic><topic>Genetic Testing</topic><topic>Genetics</topic><topic>Genome-Wide Association Study - methods</topic><topic>GWAS</topic><topic>Humans</topic><topic>immune response</topic><topic>Male</topic><topic>Mental Disorders - genetics</topic><topic>Polymorphism, Single Nucleotide</topic><topic>Risk Factors</topic><topic>Suicidal Ideation</topic><topic>Suicide</topic><topic>suicide attempt</topic><topic>Suicide, Attempted</topic><topic>White People - genetics</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Galfalvy, Hanga</creatorcontrib><creatorcontrib>Haghighi, Fatemeh</creatorcontrib><creatorcontrib>Hodgkinson, Colin</creatorcontrib><creatorcontrib>Goldman, David</creatorcontrib><creatorcontrib>Oquendo, Maria A.</creatorcontrib><creatorcontrib>Burke, Ainsley</creatorcontrib><creatorcontrib>Huang, Yung-yu</creatorcontrib><creatorcontrib>Giegling, Ina</creatorcontrib><creatorcontrib>Rujescu, Dan</creatorcontrib><creatorcontrib>Bureau, Alexandre</creatorcontrib><creatorcontrib>Turecki, Gustavo</creatorcontrib><creatorcontrib>Mann, J. 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Part B, Neuropsychiatric genetics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Galfalvy, Hanga</au><au>Haghighi, Fatemeh</au><au>Hodgkinson, Colin</au><au>Goldman, David</au><au>Oquendo, Maria A.</au><au>Burke, Ainsley</au><au>Huang, Yung-yu</au><au>Giegling, Ina</au><au>Rujescu, Dan</au><au>Bureau, Alexandre</au><au>Turecki, Gustavo</au><au>Mann, J. John</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A genome-wide association study of suicidal behavior</atitle><jtitle>American journal of medical genetics. Part B, Neuropsychiatric genetics</jtitle><addtitle>Am. J. Med. Genet</addtitle><date>2015-10</date><risdate>2015</risdate><volume>168B</volume><issue>7</issue><spage>557</spage><epage>563</epage><pages>557-563</pages><issn>1552-4841</issn><eissn>1552-485X</eissn><abstract>Genome wide array studies have reported limited success in identifying genetic markers conferring risk for suicidal behavior (SB). This may be attributable to study designs with primary outcome other than SB. We performed a GWAS on suicides and cases with a history of nonfatal suicide attempts compared with psychiatric controls and healthy volunteers. A consortium of USA, Canadian and German teams assembled two groups of cases (suicide attempters and suicides, N = 577) and non‐attempter psychiatric and healthy controls (N = 1,233). Logistic regression was used to test genotype‐suicidal behavior association. The test was repeated separating suicide attempt and completed suicide as outcomes. No SNP reached genome‐wide significance, but several SNPs within STK3, ADAMTS14, PSME2, and TBX20 genes reached P < 1 × 10−5. The top SNPs for the suicide attempt analysis included two from DPP10, one from CTNNA3 and one from STK32B. In the suicide analysis we found seven SNPs from the TBX20 gene in the top hits. Pathway analysis identified the following pathways: “Cellular Assembly and Organization,” “Nervous System Development and Function,” “Cell Death and Survival,” “Immunological Disease,” “Infectious Disease,” and “Inflammatory Response.” The top genes in the SB analysis did not overlap with those in the ideation analysis. No genome wide significant results suggest that susceptibility to SB has genetic risk factors with smaller effect sizes. The strongest candidate genes, ADAMTS14, and PSME2 (both linked to inflammatory response), STK3 (neuronal cell death), and TBX20 (brainstem motor neuron development), have not been previously reported in association with suicide and warrant further study. © 2015 Wiley Periodicals, Inc.</abstract><cop>United States</cop><pub>Blackwell Publishing Ltd</pub><pmid>26079190</pmid><doi>10.1002/ajmg.b.32330</doi><tpages>7</tpages></addata></record> |
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| ispartof | American journal of medical genetics. Part B, Neuropsychiatric genetics, 2015-10, Vol.168B (7), p.557-563 |
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| subjects | Case-Control Studies Depressive Disorder, Major - genetics Female Genetic Markers - genetics Genetic Testing Genetics Genome-Wide Association Study - methods GWAS Humans immune response Male Mental Disorders - genetics Polymorphism, Single Nucleotide Risk Factors Suicidal Ideation Suicide suicide attempt Suicide, Attempted White People - genetics |
| title | A genome-wide association study of suicidal behavior |
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