Jejuia marina nov., isolated from gravel adjacent to Geommeolle beach on Udo Island, South Korea
A bacterial strain, JH03 T , was isolated from gravel adjacent to Geommeolle beach on Udo Island, South Korea. The cells were Gram-stain-negative, aerobic, non-motile and rod shaped. The ranges of temperature, pH and NaCl concentration for growth of the bacterium were 10–45 °C, pH 6.0–9.5 and 0.5–5....
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| Veröffentlicht in: | Archives of microbiology 2015-11, Vol.197 (9), p.1095-1099 |
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| creator | Kim, Hyangmi Yang, Jae-Hyung Cha, Hyung-Kee Lee, Jae-Bong Suh, Seok-Jong Bae, Kyung Sook Park, Doo-Sang |
| description | A bacterial strain, JH03
T
, was isolated from gravel adjacent to Geommeolle beach on Udo Island, South Korea. The cells were Gram-stain-negative, aerobic, non-motile and rod shaped. The ranges of temperature, pH and NaCl concentration for growth of the bacterium were 10–45 °C, pH 6.0–9.5 and 0.5–5.0 % (w/v), respectively. The major fatty acids of the bacterium were iso-C
15:0
(15.4 %), iso-C
15:1
G (14.1 %), iso-C
16:0
3-OH (14.1 %), iso-C
17:0
3-OH (11.5 %) and anteiso-C
15:0
(11.3 %). The major isoprenoid quinone was MK-6. The polar lipids included phosphatidylethanolamine, two unidentified amino lipids and three unidentified lipids. The DNA G+C content was 34.2 mol%. The phylogenetic analysis of the 16S rRNA gene sequences showed that strain JH03
T
was most closely related to
Jejuia pallidilutea
EM39
T
(96.5 % sequence similarity). Based on the polyphasic analysis, strain JH03
T
is a novel species of the genus
Jejuia
, for which the name
Jejuia marina
sp. nov. is proposed. The type strain is JH03
T
(= KCTC 42342
T
= JCM 30601
T
). |
| doi_str_mv | 10.1007/s00203-015-1145-9 |
| format | Article |
| fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_1721918079</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>3833127231</sourcerecordid><originalsourceid>FETCH-LOGICAL-c442t-f81fd724714f46e0c95cc0d8b12db34bb1385c360c0531c79dc38ffc4f35ef803</originalsourceid><addsrcrecordid>eNp1kMFu1DAQhi1ERZeWB-CCLHHh0JQZ29k4R1RBKa3EASr1Zhx73GaVxMVOKvXt8bIFVZV6msN8_z-jj7G3CMcI0HzMAAJkBVhXiKqu2hdshUqKChpx9ZKtQIKodCvlPnud8wYAhdb6FdsXa7kuSb1iv77RZuktH23qJ8uneHd8xPscBzuT5yHFkV8ne0cDt35jHU0znyM_pTiOFIeBeEfW3fA48Usf-Vke7OSP-I-4zDf8PCayh2wv2CHTm4d5wC6_fP558rW6-H56dvLponJKibkKGoNvhGpQBbUmcG3tHHjdofCdVF2HUtdOrsFBLdE1rXdSh-BUkDUFDfKAfdj13qb4e6E8m7HPjobyEMUlG2wEtqihaQv6_gm6iUuaynd_KYlQN6JQuKNcijknCuY29UXTvUEwW_1mp98U_War32yb3z00L91I_n_in-8CiB2Qy2q6pvTo9LOtfwAyKY4p</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1721310572</pqid></control><display><type>article</type><title>Jejuia marina nov., isolated from gravel adjacent to Geommeolle beach on Udo Island, South Korea</title><source>MEDLINE</source><source>SpringerLink (Online service)</source><creator>Kim, Hyangmi ; Yang, Jae-Hyung ; Cha, Hyung-Kee ; Lee, Jae-Bong ; Suh, Seok-Jong ; Bae, Kyung Sook ; Park, Doo-Sang</creator><creatorcontrib>Kim, Hyangmi ; Yang, Jae-Hyung ; Cha, Hyung-Kee ; Lee, Jae-Bong ; Suh, Seok-Jong ; Bae, Kyung Sook ; Park, Doo-Sang</creatorcontrib><description>A bacterial strain, JH03
T
, was isolated from gravel adjacent to Geommeolle beach on Udo Island, South Korea. The cells were Gram-stain-negative, aerobic, non-motile and rod shaped. The ranges of temperature, pH and NaCl concentration for growth of the bacterium were 10–45 °C, pH 6.0–9.5 and 0.5–5.0 % (w/v), respectively. The major fatty acids of the bacterium were iso-C
15:0
(15.4 %), iso-C
15:1
G (14.1 %), iso-C
16:0
3-OH (14.1 %), iso-C
17:0
3-OH (11.5 %) and anteiso-C
15:0
(11.3 %). The major isoprenoid quinone was MK-6. The polar lipids included phosphatidylethanolamine, two unidentified amino lipids and three unidentified lipids. The DNA G+C content was 34.2 mol%. The phylogenetic analysis of the 16S rRNA gene sequences showed that strain JH03
T
was most closely related to
Jejuia pallidilutea
EM39
T
(96.5 % sequence similarity). Based on the polyphasic analysis, strain JH03
T
is a novel species of the genus
Jejuia
, for which the name
Jejuia marina
sp. nov. is proposed. The type strain is JH03
T
(= KCTC 42342
T
= JCM 30601
T
).</description><identifier>ISSN: 0302-8933</identifier><identifier>EISSN: 1432-072X</identifier><identifier>DOI: 10.1007/s00203-015-1145-9</identifier><identifier>PMID: 26362038</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer Berlin Heidelberg</publisher><subject>Bacterial Typing Techniques ; Base Composition ; Beaches ; Biochemistry ; Biomedical and Life Sciences ; Biotechnology ; Cell Biology ; Ecology ; Fatty Acids - analysis ; Fisheries ; Flavobacteriaceae - chemistry ; Flavobacteriaceae - classification ; Flavobacteriaceae - genetics ; Flavobacteriaceae - growth & development ; Geologic Sediments - microbiology ; Gravel ; Hydrogen-Ion Concentration ; Life Sciences ; Lipids ; Microbial Ecology ; Microbiology ; Microscopy ; Morphology ; Original Paper ; Phylogenetics ; Phylogeny ; Physiology ; R&D ; Republic of Korea ; Research & development ; RNA, Ribosomal, 16S - genetics ; Salinity ; Sodium chloride ; Temperature</subject><ispartof>Archives of microbiology, 2015-11, Vol.197 (9), p.1095-1099</ispartof><rights>Springer-Verlag Berlin Heidelberg 2015</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c442t-f81fd724714f46e0c95cc0d8b12db34bb1385c360c0531c79dc38ffc4f35ef803</citedby><cites>FETCH-LOGICAL-c442t-f81fd724714f46e0c95cc0d8b12db34bb1385c360c0531c79dc38ffc4f35ef803</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00203-015-1145-9$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00203-015-1145-9$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,780,784,27924,27925,41488,42557,51319</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/26362038$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Kim, Hyangmi</creatorcontrib><creatorcontrib>Yang, Jae-Hyung</creatorcontrib><creatorcontrib>Cha, Hyung-Kee</creatorcontrib><creatorcontrib>Lee, Jae-Bong</creatorcontrib><creatorcontrib>Suh, Seok-Jong</creatorcontrib><creatorcontrib>Bae, Kyung Sook</creatorcontrib><creatorcontrib>Park, Doo-Sang</creatorcontrib><title>Jejuia marina nov., isolated from gravel adjacent to Geommeolle beach on Udo Island, South Korea</title><title>Archives of microbiology</title><addtitle>Arch Microbiol</addtitle><addtitle>Arch Microbiol</addtitle><description>A bacterial strain, JH03
T
, was isolated from gravel adjacent to Geommeolle beach on Udo Island, South Korea. The cells were Gram-stain-negative, aerobic, non-motile and rod shaped. The ranges of temperature, pH and NaCl concentration for growth of the bacterium were 10–45 °C, pH 6.0–9.5 and 0.5–5.0 % (w/v), respectively. The major fatty acids of the bacterium were iso-C
15:0
(15.4 %), iso-C
15:1
G (14.1 %), iso-C
16:0
3-OH (14.1 %), iso-C
17:0
3-OH (11.5 %) and anteiso-C
15:0
(11.3 %). The major isoprenoid quinone was MK-6. The polar lipids included phosphatidylethanolamine, two unidentified amino lipids and three unidentified lipids. The DNA G+C content was 34.2 mol%. The phylogenetic analysis of the 16S rRNA gene sequences showed that strain JH03
T
was most closely related to
Jejuia pallidilutea
EM39
T
(96.5 % sequence similarity). Based on the polyphasic analysis, strain JH03
T
is a novel species of the genus
Jejuia
, for which the name
Jejuia marina
sp. nov. is proposed. The type strain is JH03
T
(= KCTC 42342
T
= JCM 30601
T
).</description><subject>Bacterial Typing Techniques</subject><subject>Base Composition</subject><subject>Beaches</subject><subject>Biochemistry</subject><subject>Biomedical and Life Sciences</subject><subject>Biotechnology</subject><subject>Cell Biology</subject><subject>Ecology</subject><subject>Fatty Acids - analysis</subject><subject>Fisheries</subject><subject>Flavobacteriaceae - chemistry</subject><subject>Flavobacteriaceae - classification</subject><subject>Flavobacteriaceae - genetics</subject><subject>Flavobacteriaceae - growth & development</subject><subject>Geologic Sediments - microbiology</subject><subject>Gravel</subject><subject>Hydrogen-Ion Concentration</subject><subject>Life Sciences</subject><subject>Lipids</subject><subject>Microbial Ecology</subject><subject>Microbiology</subject><subject>Microscopy</subject><subject>Morphology</subject><subject>Original Paper</subject><subject>Phylogenetics</subject><subject>Phylogeny</subject><subject>Physiology</subject><subject>R&D</subject><subject>Republic of Korea</subject><subject>Research & development</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>Salinity</subject><subject>Sodium chloride</subject><subject>Temperature</subject><issn>0302-8933</issn><issn>1432-072X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNp1kMFu1DAQhi1ERZeWB-CCLHHh0JQZ29k4R1RBKa3EASr1Zhx73GaVxMVOKvXt8bIFVZV6msN8_z-jj7G3CMcI0HzMAAJkBVhXiKqu2hdshUqKChpx9ZKtQIKodCvlPnud8wYAhdb6FdsXa7kuSb1iv77RZuktH23qJ8uneHd8xPscBzuT5yHFkV8ne0cDt35jHU0znyM_pTiOFIeBeEfW3fA48Usf-Vke7OSP-I-4zDf8PCayh2wv2CHTm4d5wC6_fP558rW6-H56dvLponJKibkKGoNvhGpQBbUmcG3tHHjdofCdVF2HUtdOrsFBLdE1rXdSh-BUkDUFDfKAfdj13qb4e6E8m7HPjobyEMUlG2wEtqihaQv6_gm6iUuaynd_KYlQN6JQuKNcijknCuY29UXTvUEwW_1mp98U_War32yb3z00L91I_n_in-8CiB2Qy2q6pvTo9LOtfwAyKY4p</recordid><startdate>20151101</startdate><enddate>20151101</enddate><creator>Kim, Hyangmi</creator><creator>Yang, Jae-Hyung</creator><creator>Cha, Hyung-Kee</creator><creator>Lee, Jae-Bong</creator><creator>Suh, Seok-Jong</creator><creator>Bae, Kyung Sook</creator><creator>Park, Doo-Sang</creator><general>Springer Berlin Heidelberg</general><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M7N</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>20151101</creationdate><title>Jejuia marina nov., isolated from gravel adjacent to Geommeolle beach on Udo Island, South Korea</title><author>Kim, Hyangmi ; Yang, Jae-Hyung ; Cha, Hyung-Kee ; Lee, Jae-Bong ; Suh, Seok-Jong ; Bae, Kyung Sook ; Park, Doo-Sang</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c442t-f81fd724714f46e0c95cc0d8b12db34bb1385c360c0531c79dc38ffc4f35ef803</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>Bacterial Typing Techniques</topic><topic>Base Composition</topic><topic>Beaches</topic><topic>Biochemistry</topic><topic>Biomedical and Life Sciences</topic><topic>Biotechnology</topic><topic>Cell Biology</topic><topic>Ecology</topic><topic>Fatty Acids - analysis</topic><topic>Fisheries</topic><topic>Flavobacteriaceae - chemistry</topic><topic>Flavobacteriaceae - classification</topic><topic>Flavobacteriaceae - genetics</topic><topic>Flavobacteriaceae - growth & development</topic><topic>Geologic Sediments - microbiology</topic><topic>Gravel</topic><topic>Hydrogen-Ion Concentration</topic><topic>Life Sciences</topic><topic>Lipids</topic><topic>Microbial Ecology</topic><topic>Microbiology</topic><topic>Microscopy</topic><topic>Morphology</topic><topic>Original Paper</topic><topic>Phylogenetics</topic><topic>Phylogeny</topic><topic>Physiology</topic><topic>R&D</topic><topic>Republic of Korea</topic><topic>Research & development</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>Salinity</topic><topic>Sodium chloride</topic><topic>Temperature</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Kim, Hyangmi</creatorcontrib><creatorcontrib>Yang, Jae-Hyung</creatorcontrib><creatorcontrib>Cha, Hyung-Kee</creatorcontrib><creatorcontrib>Lee, Jae-Bong</creatorcontrib><creatorcontrib>Suh, Seok-Jong</creatorcontrib><creatorcontrib>Bae, Kyung Sook</creatorcontrib><creatorcontrib>Park, Doo-Sang</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Virology and AIDS Abstracts</collection><collection>ProQuest_Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>ProQuest Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>ProQuest Biological Science Journals</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Archives of microbiology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kim, Hyangmi</au><au>Yang, Jae-Hyung</au><au>Cha, Hyung-Kee</au><au>Lee, Jae-Bong</au><au>Suh, Seok-Jong</au><au>Bae, Kyung Sook</au><au>Park, Doo-Sang</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Jejuia marina nov., isolated from gravel adjacent to Geommeolle beach on Udo Island, South Korea</atitle><jtitle>Archives of microbiology</jtitle><stitle>Arch Microbiol</stitle><addtitle>Arch Microbiol</addtitle><date>2015-11-01</date><risdate>2015</risdate><volume>197</volume><issue>9</issue><spage>1095</spage><epage>1099</epage><pages>1095-1099</pages><issn>0302-8933</issn><eissn>1432-072X</eissn><abstract>A bacterial strain, JH03
T
, was isolated from gravel adjacent to Geommeolle beach on Udo Island, South Korea. The cells were Gram-stain-negative, aerobic, non-motile and rod shaped. The ranges of temperature, pH and NaCl concentration for growth of the bacterium were 10–45 °C, pH 6.0–9.5 and 0.5–5.0 % (w/v), respectively. The major fatty acids of the bacterium were iso-C
15:0
(15.4 %), iso-C
15:1
G (14.1 %), iso-C
16:0
3-OH (14.1 %), iso-C
17:0
3-OH (11.5 %) and anteiso-C
15:0
(11.3 %). The major isoprenoid quinone was MK-6. The polar lipids included phosphatidylethanolamine, two unidentified amino lipids and three unidentified lipids. The DNA G+C content was 34.2 mol%. The phylogenetic analysis of the 16S rRNA gene sequences showed that strain JH03
T
was most closely related to
Jejuia pallidilutea
EM39
T
(96.5 % sequence similarity). Based on the polyphasic analysis, strain JH03
T
is a novel species of the genus
Jejuia
, for which the name
Jejuia marina
sp. nov. is proposed. The type strain is JH03
T
(= KCTC 42342
T
= JCM 30601
T
).</abstract><cop>Berlin/Heidelberg</cop><pub>Springer Berlin Heidelberg</pub><pmid>26362038</pmid><doi>10.1007/s00203-015-1145-9</doi><tpages>5</tpages></addata></record> |
| fulltext | fulltext |
| identifier | ISSN: 0302-8933 |
| ispartof | Archives of microbiology, 2015-11, Vol.197 (9), p.1095-1099 |
| issn | 0302-8933 1432-072X |
| language | eng |
| recordid | cdi_proquest_miscellaneous_1721918079 |
| source | MEDLINE; SpringerLink (Online service) |
| subjects | Bacterial Typing Techniques Base Composition Beaches Biochemistry Biomedical and Life Sciences Biotechnology Cell Biology Ecology Fatty Acids - analysis Fisheries Flavobacteriaceae - chemistry Flavobacteriaceae - classification Flavobacteriaceae - genetics Flavobacteriaceae - growth & development Geologic Sediments - microbiology Gravel Hydrogen-Ion Concentration Life Sciences Lipids Microbial Ecology Microbiology Microscopy Morphology Original Paper Phylogenetics Phylogeny Physiology R&D Republic of Korea Research & development RNA, Ribosomal, 16S - genetics Salinity Sodium chloride Temperature |
| title | Jejuia marina nov., isolated from gravel adjacent to Geommeolle beach on Udo Island, South Korea |
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