Chronological protein synthesis in regenerating rat liver
Liver regeneration has been studied for decades; however, its regulation remains unclear. In this study, we report a dynamic tracing of protein synthesis in rat regenerating liver with a new proteomic technique, 35S in vivo labeling analysis for dynamic proteomics (SiLAD). Conventional proteomic tec...
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Veröffentlicht in: | Electrophoresis 2015-07, Vol.36 (14), p.1622-1632 |
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creator | He, Jinjun Hao, Shuai Zhang, Hao Guo, Fuzheng Huang, Lingyun Xiao, Xueyuan He, Dacheng |
description | Liver regeneration has been studied for decades; however, its regulation remains unclear. In this study, we report a dynamic tracing of protein synthesis in rat regenerating liver with a new proteomic technique, 35S in vivo labeling analysis for dynamic proteomics (SiLAD). Conventional proteomic techniques typically measure protein alteration in accumulated amounts. The SiLAD technique specifically detects protein synthesis velocity instead of accumulated amounts of protein through 35S pulse labeling of newly synthesized proteins, providing a direct way for analyzing protein synthesis variations. Consequently, protein synthesis within short as 30 min was visualized and protein regulations in the first 8 h of regenerating liver were dynamically traced. Further, the 3.5–5 h post partial hepatectomy (PHx) was shown to be an important regulatory turning point by acute regulation of many proteins in the initiation of liver regeneration. |
doi_str_mv | 10.1002/elps.201500019 |
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In this study, we report a dynamic tracing of protein synthesis in rat regenerating liver with a new proteomic technique, 35S in vivo labeling analysis for dynamic proteomics (SiLAD). Conventional proteomic techniques typically measure protein alteration in accumulated amounts. The SiLAD technique specifically detects protein synthesis velocity instead of accumulated amounts of protein through 35S pulse labeling of newly synthesized proteins, providing a direct way for analyzing protein synthesis variations. Consequently, protein synthesis within short as 30 min was visualized and protein regulations in the first 8 h of regenerating liver were dynamically traced. Further, the 3.5–5 h post partial hepatectomy (PHx) was shown to be an important regulatory turning point by acute regulation of many proteins in the initiation of liver regeneration.</description><identifier>ISSN: 0173-0835</identifier><identifier>EISSN: 1522-2683</identifier><identifier>DOI: 10.1002/elps.201500019</identifier><identifier>PMID: 25873423</identifier><language>eng</language><publisher>Germany: Blackwell Publishing Ltd</publisher><subject>Animals ; Control ; Dynamic proteomics ; Dynamic tests ; Dynamics ; Hepatectomy ; Liver ; Liver - physiology ; Liver - surgery ; Liver Regeneration ; Male ; Marking ; Protein Biosynthesis ; Protein Interaction Maps ; Protein synthesis ; Protein synthesis velocity ; Proteins ; Proteins - analysis ; Proteins - metabolism ; Proteomics ; Pulse labeling ; Rats ; Rats, Sprague-Dawley</subject><ispartof>Electrophoresis, 2015-07, Vol.36 (14), p.1622-1632</ispartof><rights>2015 WILEY‐VCH Verlag GmbH & Co. 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KGaA, Weinheim.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c4813-6a5d113b1cca2524b010a0e2779896384f7dbdb1a1447ce67691c832b40692063</citedby><cites>FETCH-LOGICAL-c4813-6a5d113b1cca2524b010a0e2779896384f7dbdb1a1447ce67691c832b40692063</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1002%2Felps.201500019$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1002%2Felps.201500019$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,777,781,1412,27905,27906,45555,45556</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/25873423$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>He, Jinjun</creatorcontrib><creatorcontrib>Hao, Shuai</creatorcontrib><creatorcontrib>Zhang, Hao</creatorcontrib><creatorcontrib>Guo, Fuzheng</creatorcontrib><creatorcontrib>Huang, Lingyun</creatorcontrib><creatorcontrib>Xiao, Xueyuan</creatorcontrib><creatorcontrib>He, Dacheng</creatorcontrib><title>Chronological protein synthesis in regenerating rat liver</title><title>Electrophoresis</title><addtitle>ELECTROPHORESIS</addtitle><description>Liver regeneration has been studied for decades; however, its regulation remains unclear. In this study, we report a dynamic tracing of protein synthesis in rat regenerating liver with a new proteomic technique, 35S in vivo labeling analysis for dynamic proteomics (SiLAD). Conventional proteomic techniques typically measure protein alteration in accumulated amounts. The SiLAD technique specifically detects protein synthesis velocity instead of accumulated amounts of protein through 35S pulse labeling of newly synthesized proteins, providing a direct way for analyzing protein synthesis variations. Consequently, protein synthesis within short as 30 min was visualized and protein regulations in the first 8 h of regenerating liver were dynamically traced. Further, the 3.5–5 h post partial hepatectomy (PHx) was shown to be an important regulatory turning point by acute regulation of many proteins in the initiation of liver regeneration.</description><subject>Animals</subject><subject>Control</subject><subject>Dynamic proteomics</subject><subject>Dynamic tests</subject><subject>Dynamics</subject><subject>Hepatectomy</subject><subject>Liver</subject><subject>Liver - physiology</subject><subject>Liver - surgery</subject><subject>Liver Regeneration</subject><subject>Male</subject><subject>Marking</subject><subject>Protein Biosynthesis</subject><subject>Protein Interaction Maps</subject><subject>Protein synthesis</subject><subject>Protein synthesis velocity</subject><subject>Proteins</subject><subject>Proteins - analysis</subject><subject>Proteins - metabolism</subject><subject>Proteomics</subject><subject>Pulse labeling</subject><subject>Rats</subject><subject>Rats, Sprague-Dawley</subject><issn>0173-0835</issn><issn>1522-2683</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkElPwzAQhS0EgrJcOaIcuaR4vPuIyipVLGI7Wk46LYY0KXYK9N-TqtArp6eRvvc0-gg5BNoHStkJVrPUZxQkpRTsBumBZCxnyvBN0qOgeU4NlztkN6W3DhFWiG2yw6TRXDDeI3bwGpu6qZpJKH2VzWLTYqiztKjbV0whZd0RcYI1Rt-GepJ1kVXhE-M-2Rr7KuHBb-6Rp4vzx8FVPry9vB6cDvNSGOC58nIEwAsoS88kEwUF6ikyra2xihsx1qNiVIAHIXSJSisLpeGsEFRZRhXfI8er3e63jzmm1k1DKrGqfI3NPDnQYKyQYMX_qLKaQedtudpfoWVsUoo4drMYpj4uHFC3NOuWZt3abFc4-t2eF1McrfE_lR0gVsBXqHDxz5w7H949SGGWtXxVC6nF73XNx3enNNfSvdxcumetz9iLvXf3_AdaipGF</recordid><startdate>201507</startdate><enddate>201507</enddate><creator>He, Jinjun</creator><creator>Hao, Shuai</creator><creator>Zhang, Hao</creator><creator>Guo, Fuzheng</creator><creator>Huang, Lingyun</creator><creator>Xiao, Xueyuan</creator><creator>He, Dacheng</creator><general>Blackwell Publishing Ltd</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7U5</scope><scope>8FD</scope><scope>L7M</scope></search><sort><creationdate>201507</creationdate><title>Chronological protein synthesis in regenerating rat liver</title><author>He, Jinjun ; Hao, Shuai ; Zhang, Hao ; Guo, Fuzheng ; Huang, Lingyun ; Xiao, Xueyuan ; He, Dacheng</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c4813-6a5d113b1cca2524b010a0e2779896384f7dbdb1a1447ce67691c832b40692063</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>Animals</topic><topic>Control</topic><topic>Dynamic proteomics</topic><topic>Dynamic tests</topic><topic>Dynamics</topic><topic>Hepatectomy</topic><topic>Liver</topic><topic>Liver - physiology</topic><topic>Liver - surgery</topic><topic>Liver Regeneration</topic><topic>Male</topic><topic>Marking</topic><topic>Protein Biosynthesis</topic><topic>Protein Interaction Maps</topic><topic>Protein synthesis</topic><topic>Protein synthesis velocity</topic><topic>Proteins</topic><topic>Proteins - analysis</topic><topic>Proteins - metabolism</topic><topic>Proteomics</topic><topic>Pulse labeling</topic><topic>Rats</topic><topic>Rats, Sprague-Dawley</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>He, Jinjun</creatorcontrib><creatorcontrib>Hao, Shuai</creatorcontrib><creatorcontrib>Zhang, Hao</creatorcontrib><creatorcontrib>Guo, Fuzheng</creatorcontrib><creatorcontrib>Huang, Lingyun</creatorcontrib><creatorcontrib>Xiao, Xueyuan</creatorcontrib><creatorcontrib>He, Dacheng</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>Technology Research Database</collection><collection>Advanced Technologies Database with Aerospace</collection><jtitle>Electrophoresis</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>He, Jinjun</au><au>Hao, Shuai</au><au>Zhang, Hao</au><au>Guo, Fuzheng</au><au>Huang, Lingyun</au><au>Xiao, Xueyuan</au><au>He, Dacheng</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Chronological protein synthesis in regenerating rat liver</atitle><jtitle>Electrophoresis</jtitle><addtitle>ELECTROPHORESIS</addtitle><date>2015-07</date><risdate>2015</risdate><volume>36</volume><issue>14</issue><spage>1622</spage><epage>1632</epage><pages>1622-1632</pages><issn>0173-0835</issn><eissn>1522-2683</eissn><abstract>Liver regeneration has been studied for decades; however, its regulation remains unclear. In this study, we report a dynamic tracing of protein synthesis in rat regenerating liver with a new proteomic technique, 35S in vivo labeling analysis for dynamic proteomics (SiLAD). Conventional proteomic techniques typically measure protein alteration in accumulated amounts. The SiLAD technique specifically detects protein synthesis velocity instead of accumulated amounts of protein through 35S pulse labeling of newly synthesized proteins, providing a direct way for analyzing protein synthesis variations. Consequently, protein synthesis within short as 30 min was visualized and protein regulations in the first 8 h of regenerating liver were dynamically traced. 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subjects | Animals Control Dynamic proteomics Dynamic tests Dynamics Hepatectomy Liver Liver - physiology Liver - surgery Liver Regeneration Male Marking Protein Biosynthesis Protein Interaction Maps Protein synthesis Protein synthesis velocity Proteins Proteins - analysis Proteins - metabolism Proteomics Pulse labeling Rats Rats, Sprague-Dawley |
title | Chronological protein synthesis in regenerating rat liver |
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