The expression of a rice secondary wall-specific cellulose synthase gene, OsCesA7, is directly regulated by a rice transcription factor, OsMYB58/63
Main conclusion A rice MYB transcription factor, OsMYB58/63, was found to directly upregulate the expression of a rice secondary wall-specific cellulose synthase gene, cellulose synthase A7 (OsCesA7); in contrast, the Arabidopsis putative orthologs AtMYB58 and AtMYB63 have been shown to specifically...
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description | Main conclusion A rice MYB transcription factor, OsMYB58/63, was found to directly upregulate the expression of a rice secondary wall-specific cellulose synthase gene, cellulose synthase A7 (OsCesA7); in contrast, the Arabidopsis putative orthologs AtMYB58 and AtMYB63 have been shown to specifically activate lignin biosynthesis. Although indirect evidence has shown that grass plants are similar to but partially different from dicotyledonous ones in transcriptional regulation of lignocellulose biosynthesis, little is known about the differences. This study showed that a rice MYB transcription factor, OsMYB58/63, directly upregulated the expression of a rice secondary wall-specific cellulose synthase gene, cellulose synthase A7(OsCesAT). Gene co-expression analysis showed that, in rice, OsMYB58/63 and several rice MYB genes were coexpressed with genes encoding lignocellulose biosynthetic enzymes. The expression levels of OsMYB55/61, OsMYB55/61-L, OsMYB58/63, and OsMYB42/85 were commonly found to be high in culm internodes and nodes. All four MYB transcription factors functioned as transcriptional activators in yeast cells. OsMYB58/63 most strongly transactivated the expression of OsCesA7 in rice protoplasts. Moreover, recombinant OsMYB58/63 protein was bound to two distinct c/s-regulatory elements, AC-II and SMRE3, in the OsCesA7 promoter. This is in sharp contrast to the role of Arabidopsis orthologs, AtMYB58 and AtMYB63, which had been reported to specifically activate lignin biosynthesis. The promoter analysis revealed that AC elements, which are the binding sites for MYB58 and MYB63, were lacking in cellulose and xylan biosynthetic genes in Arabidopsis, but present in cellulose, xylan, and lignin biosynthetic genes in rice, implying that the difference of transcriptional regulation between rice and Arabidopsis is due to the distinct composition of promoters. Our results provide a new insight into transcriptional regulation in grass lignocellulose biosynthesis. |
doi_str_mv | 10.1007/s00425-015-2343-z |
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Although indirect evidence has shown that grass plants are similar to but partially different from dicotyledonous ones in transcriptional regulation of lignocellulose biosynthesis, little is known about the differences. This study showed that a rice MYB transcription factor, OsMYB58/63, directly upregulated the expression of a rice secondary wall-specific cellulose synthase gene, cellulose synthase A7(OsCesAT). Gene co-expression analysis showed that, in rice, OsMYB58/63 and several rice MYB genes were coexpressed with genes encoding lignocellulose biosynthetic enzymes. The expression levels of OsMYB55/61, OsMYB55/61-L, OsMYB58/63, and OsMYB42/85 were commonly found to be high in culm internodes and nodes. All four MYB transcription factors functioned as transcriptional activators in yeast cells. OsMYB58/63 most strongly transactivated the expression of OsCesA7 in rice protoplasts. Moreover, recombinant OsMYB58/63 protein was bound to two distinct c/s-regulatory elements, AC-II and SMRE3, in the OsCesA7 promoter. This is in sharp contrast to the role of Arabidopsis orthologs, AtMYB58 and AtMYB63, which had been reported to specifically activate lignin biosynthesis. The promoter analysis revealed that AC elements, which are the binding sites for MYB58 and MYB63, were lacking in cellulose and xylan biosynthetic genes in Arabidopsis, but present in cellulose, xylan, and lignin biosynthetic genes in rice, implying that the difference of transcriptional regulation between rice and Arabidopsis is due to the distinct composition of promoters. Our results provide a new insight into transcriptional regulation in grass lignocellulose biosynthesis.</description><identifier>ISSN: 0032-0935</identifier><identifier>EISSN: 1432-2048</identifier><identifier>DOI: 10.1007/s00425-015-2343-z</identifier><identifier>PMID: 26070439</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer-Verlag</publisher><subject>Agriculture ; Arabidopsis ; Biomedical and Life Sciences ; Biosynthesis ; Cell Wall - enzymology ; Cell Wall - genetics ; Cell Wall - metabolism ; Cellulose ; Ecology ; Forestry ; Gene Expression Regulation, Plant ; Glucosyltransferases - genetics ; Glucosyltransferases - metabolism ; Grasses ; Life Sciences ; Original Article ; Oryza - enzymology ; Oryza - genetics ; Oryza - metabolism ; Plant Proteins - genetics ; Plant Proteins - metabolism ; Plant Sciences ; Polyphenols: biosynthesis and function in plants and ecosystems ; Transcription Factors - genetics ; Transcription Factors - metabolism ; Yeasts</subject><ispartof>Planta, 2015-09, Vol.242 (3), p.589-600</ispartof><rights>Springer-Verlag Berlin Heidelberg 2015</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c563t-c2e7c601d701d4e0e05bf0278471e9ba51cc9f8ff454a04e46e67167db87afc33</citedby><cites>FETCH-LOGICAL-c563t-c2e7c601d701d4e0e05bf0278471e9ba51cc9f8ff454a04e46e67167db87afc33</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/43564082$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/43564082$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>314,780,784,803,27924,27925,41488,42557,51319,58017,58250</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/26070439$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Noda, Soichiro</creatorcontrib><creatorcontrib>Koshiba, Taichi</creatorcontrib><creatorcontrib>Hattori, Takefumi</creatorcontrib><creatorcontrib>Yamaguchi, Masatoshi</creatorcontrib><creatorcontrib>Suzuki, Shiro</creatorcontrib><creatorcontrib>Umezawa, Toshiaki</creatorcontrib><title>The expression of a rice secondary wall-specific cellulose synthase gene, OsCesA7, is directly regulated by a rice transcription factor, OsMYB58/63</title><title>Planta</title><addtitle>Planta</addtitle><addtitle>Planta</addtitle><description>Main conclusion A rice MYB transcription factor, OsMYB58/63, was found to directly upregulate the expression of a rice secondary wall-specific cellulose synthase gene, cellulose synthase A7 (OsCesA7); in contrast, the Arabidopsis putative orthologs AtMYB58 and AtMYB63 have been shown to specifically activate lignin biosynthesis. Although indirect evidence has shown that grass plants are similar to but partially different from dicotyledonous ones in transcriptional regulation of lignocellulose biosynthesis, little is known about the differences. This study showed that a rice MYB transcription factor, OsMYB58/63, directly upregulated the expression of a rice secondary wall-specific cellulose synthase gene, cellulose synthase A7(OsCesAT). Gene co-expression analysis showed that, in rice, OsMYB58/63 and several rice MYB genes were coexpressed with genes encoding lignocellulose biosynthetic enzymes. The expression levels of OsMYB55/61, OsMYB55/61-L, OsMYB58/63, and OsMYB42/85 were commonly found to be high in culm internodes and nodes. All four MYB transcription factors functioned as transcriptional activators in yeast cells. OsMYB58/63 most strongly transactivated the expression of OsCesA7 in rice protoplasts. Moreover, recombinant OsMYB58/63 protein was bound to two distinct c/s-regulatory elements, AC-II and SMRE3, in the OsCesA7 promoter. This is in sharp contrast to the role of Arabidopsis orthologs, AtMYB58 and AtMYB63, which had been reported to specifically activate lignin biosynthesis. The promoter analysis revealed that AC elements, which are the binding sites for MYB58 and MYB63, were lacking in cellulose and xylan biosynthetic genes in Arabidopsis, but present in cellulose, xylan, and lignin biosynthetic genes in rice, implying that the difference of transcriptional regulation between rice and Arabidopsis is due to the distinct composition of promoters. Our results provide a new insight into transcriptional regulation in grass lignocellulose biosynthesis.</description><subject>Agriculture</subject><subject>Arabidopsis</subject><subject>Biomedical and Life Sciences</subject><subject>Biosynthesis</subject><subject>Cell Wall - enzymology</subject><subject>Cell Wall - genetics</subject><subject>Cell Wall - metabolism</subject><subject>Cellulose</subject><subject>Ecology</subject><subject>Forestry</subject><subject>Gene Expression Regulation, Plant</subject><subject>Glucosyltransferases - genetics</subject><subject>Glucosyltransferases - metabolism</subject><subject>Grasses</subject><subject>Life Sciences</subject><subject>Original Article</subject><subject>Oryza - enzymology</subject><subject>Oryza - genetics</subject><subject>Oryza - metabolism</subject><subject>Plant Proteins - genetics</subject><subject>Plant Proteins - metabolism</subject><subject>Plant Sciences</subject><subject>Polyphenols: biosynthesis and function in plants and ecosystems</subject><subject>Transcription Factors - genetics</subject><subject>Transcription Factors - metabolism</subject><subject>Yeasts</subject><issn>0032-0935</issn><issn>1432-2048</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNqNkU1v1DAQhi0EosvCD-AAssSFQ0PHX3FyLCu-pKJeyoFT5DjjbVbZZPEkKtu_wR_GUdoKcUDIsjzSvO87Gj-MvRTwTgDYMwLQ0mQgTCaVVtntI7YSWslMgi4esxVAqqFU5oQ9I9oBpKa1T9mJzMGCVuWK_bq6Ro4_DxGJ2qHnQ-COx9YjJ_RD37h45Deu6zI6oG9D67nHrpu6gZLi2I_XLhVb7PGUX9IG6dye8pZ400b0Y3fkEbdT50ZseH28Tx6j68nH9jDOE4Pz4xBn-9fv701xlqvn7ElwHeGLu3fNvn38cLX5nF1cfvqyOb_IvMnVmHmJ1ucgGpuuRkAwdQBpC20FlrUzwvsyFCFoox1o1DnmVuS2qQvrgldqzd4uuYc4_JiQxmrf0rye63GYqBJWWF0C5Po_pGCsUiKdNXvzl3Q3TLFPi8wqXSo5Y1gzsah8HIgihuoQ23367UpANcOtFrhVglvNcKvb5Hl9lzzVe2weHPc0k0AuAkqtfovxj9H_SH21mHaUODyEamVyDYVUvwFTY7iv</recordid><startdate>20150901</startdate><enddate>20150901</enddate><creator>Noda, Soichiro</creator><creator>Koshiba, Taichi</creator><creator>Hattori, Takefumi</creator><creator>Yamaguchi, Masatoshi</creator><creator>Suzuki, Shiro</creator><creator>Umezawa, Toshiaki</creator><general>Springer-Verlag</general><general>Springer Berlin Heidelberg</general><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QP</scope><scope>7QR</scope><scope>7TM</scope><scope>7X2</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>ATCPS</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0K</scope><scope>M0S</scope><scope>M1P</scope><scope>M7P</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>RC3</scope><scope>7X8</scope></search><sort><creationdate>20150901</creationdate><title>The expression of a rice secondary wall-specific cellulose synthase gene, OsCesA7, is directly regulated by a rice transcription factor, OsMYB58/63</title><author>Noda, Soichiro ; Koshiba, Taichi ; Hattori, Takefumi ; Yamaguchi, Masatoshi ; Suzuki, Shiro ; Umezawa, Toshiaki</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c563t-c2e7c601d701d4e0e05bf0278471e9ba51cc9f8ff454a04e46e67167db87afc33</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>Agriculture</topic><topic>Arabidopsis</topic><topic>Biomedical and Life Sciences</topic><topic>Biosynthesis</topic><topic>Cell Wall - enzymology</topic><topic>Cell Wall - genetics</topic><topic>Cell Wall - metabolism</topic><topic>Cellulose</topic><topic>Ecology</topic><topic>Forestry</topic><topic>Gene Expression Regulation, Plant</topic><topic>Glucosyltransferases - genetics</topic><topic>Glucosyltransferases - metabolism</topic><topic>Grasses</topic><topic>Life Sciences</topic><topic>Original Article</topic><topic>Oryza - enzymology</topic><topic>Oryza - genetics</topic><topic>Oryza - metabolism</topic><topic>Plant Proteins - genetics</topic><topic>Plant Proteins - metabolism</topic><topic>Plant Sciences</topic><topic>Polyphenols: biosynthesis and function in plants and ecosystems</topic><topic>Transcription Factors - genetics</topic><topic>Transcription Factors - metabolism</topic><topic>Yeasts</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Noda, Soichiro</creatorcontrib><creatorcontrib>Koshiba, Taichi</creatorcontrib><creatorcontrib>Hattori, Takefumi</creatorcontrib><creatorcontrib>Yamaguchi, Masatoshi</creatorcontrib><creatorcontrib>Suzuki, Shiro</creatorcontrib><creatorcontrib>Umezawa, Toshiaki</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Calcium & Calcified Tissue Abstracts</collection><collection>Chemoreception Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Agricultural Science Collection</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>Agricultural & Environmental Science Collection</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Agricultural Science Database</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>Planta</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Noda, Soichiro</au><au>Koshiba, Taichi</au><au>Hattori, Takefumi</au><au>Yamaguchi, Masatoshi</au><au>Suzuki, Shiro</au><au>Umezawa, Toshiaki</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The expression of a rice secondary wall-specific cellulose synthase gene, OsCesA7, is directly regulated by a rice transcription factor, OsMYB58/63</atitle><jtitle>Planta</jtitle><stitle>Planta</stitle><addtitle>Planta</addtitle><date>2015-09-01</date><risdate>2015</risdate><volume>242</volume><issue>3</issue><spage>589</spage><epage>600</epage><pages>589-600</pages><issn>0032-0935</issn><eissn>1432-2048</eissn><abstract>Main conclusion A rice MYB transcription factor, OsMYB58/63, was found to directly upregulate the expression of a rice secondary wall-specific cellulose synthase gene, cellulose synthase A7 (OsCesA7); in contrast, the Arabidopsis putative orthologs AtMYB58 and AtMYB63 have been shown to specifically activate lignin biosynthesis. Although indirect evidence has shown that grass plants are similar to but partially different from dicotyledonous ones in transcriptional regulation of lignocellulose biosynthesis, little is known about the differences. This study showed that a rice MYB transcription factor, OsMYB58/63, directly upregulated the expression of a rice secondary wall-specific cellulose synthase gene, cellulose synthase A7(OsCesAT). Gene co-expression analysis showed that, in rice, OsMYB58/63 and several rice MYB genes were coexpressed with genes encoding lignocellulose biosynthetic enzymes. The expression levels of OsMYB55/61, OsMYB55/61-L, OsMYB58/63, and OsMYB42/85 were commonly found to be high in culm internodes and nodes. All four MYB transcription factors functioned as transcriptional activators in yeast cells. OsMYB58/63 most strongly transactivated the expression of OsCesA7 in rice protoplasts. Moreover, recombinant OsMYB58/63 protein was bound to two distinct c/s-regulatory elements, AC-II and SMRE3, in the OsCesA7 promoter. This is in sharp contrast to the role of Arabidopsis orthologs, AtMYB58 and AtMYB63, which had been reported to specifically activate lignin biosynthesis. The promoter analysis revealed that AC elements, which are the binding sites for MYB58 and MYB63, were lacking in cellulose and xylan biosynthetic genes in Arabidopsis, but present in cellulose, xylan, and lignin biosynthetic genes in rice, implying that the difference of transcriptional regulation between rice and Arabidopsis is due to the distinct composition of promoters. Our results provide a new insight into transcriptional regulation in grass lignocellulose biosynthesis.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer-Verlag</pub><pmid>26070439</pmid><doi>10.1007/s00425-015-2343-z</doi><tpages>12</tpages></addata></record> |
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subjects | Agriculture Arabidopsis Biomedical and Life Sciences Biosynthesis Cell Wall - enzymology Cell Wall - genetics Cell Wall - metabolism Cellulose Ecology Forestry Gene Expression Regulation, Plant Glucosyltransferases - genetics Glucosyltransferases - metabolism Grasses Life Sciences Original Article Oryza - enzymology Oryza - genetics Oryza - metabolism Plant Proteins - genetics Plant Proteins - metabolism Plant Sciences Polyphenols: biosynthesis and function in plants and ecosystems Transcription Factors - genetics Transcription Factors - metabolism Yeasts |
title | The expression of a rice secondary wall-specific cellulose synthase gene, OsCesA7, is directly regulated by a rice transcription factor, OsMYB58/63 |
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