RNA-Binding Protein Musashi1 Is a Central Regulator of Adhesion Pathways in Glioblastoma

The conserved RNA-binding protein Musashi1 (MSI1) has emerged as a key oncogenic factor in numerous solid tumors, including glioblastoma. However, its mechanism of action has not yet been established comprehensively. To identify its target genes comprehensively and determine the main routes by which...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Molecular and cellular biology 2015-09, Vol.35 (17), p.2965-2978
Hauptverfasser: Uren, Philip J., Vo, Dat T., de Araujo, Patricia Rosa, Pötschke, Rebecca, Burns, Suzanne C., Bahrami-Samani, Emad, Qiao, Mei, de Sousa Abreu, Raquel, Nakaya, Helder I., Correa, Bruna R., Kühnöl, Caspar, Ule, Jernej, Martindale, Jennifer L., Abdelmohsen, Kotb, Gorospe, Myriam, Smith, Andrew D., Penalva, Luiz O. F.
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 2978
container_issue 17
container_start_page 2965
container_title Molecular and cellular biology
container_volume 35
creator Uren, Philip J.
Vo, Dat T.
de Araujo, Patricia Rosa
Pötschke, Rebecca
Burns, Suzanne C.
Bahrami-Samani, Emad
Qiao, Mei
de Sousa Abreu, Raquel
Nakaya, Helder I.
Correa, Bruna R.
Kühnöl, Caspar
Ule, Jernej
Martindale, Jennifer L.
Abdelmohsen, Kotb
Gorospe, Myriam
Smith, Andrew D.
Penalva, Luiz O. F.
description The conserved RNA-binding protein Musashi1 (MSI1) has emerged as a key oncogenic factor in numerous solid tumors, including glioblastoma. However, its mechanism of action has not yet been established comprehensively. To identify its target genes comprehensively and determine the main routes by which it influences glioblastoma phenotypes, we conducted individual-nucleotide resolution cross-linking and immunoprecipitation (iCLIP) experiments. We confirmed that MSI1 has a preference for UAG sequences contained in a particular structural context, especially in 3′ untranslated regions. Although numerous binding sites were also identified in intronic sequences, our RNA transcriptome sequencing analysis does not favor the idea that MSI1 is a major regulator of splicing in glioblastoma cells. MSI1 target mRNAs encode proteins that function in multiple pathways of cell proliferation and cell adhesion. Since these associations indicate potentially new roles for MSI1, we investigated its impact on glioblastoma cell adhesion, morphology, migration, and invasion. These processes are known to underpin the spread and relapse of glioblastoma, in contrast to other tumors where metastasis is the main driver of recurrence and progression.
doi_str_mv 10.1128/MCB.00410-15
format Article
fullrecord <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_1702086481</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>1702086481</sourcerecordid><originalsourceid>FETCH-LOGICAL-c432t-983742e21055a84cc668cca4b73dc7715419985acdecdd805cfdc2ca428a13a33</originalsourceid><addsrcrecordid>eNptkU1PHDEMhiPUCij0xhnl2AMD-ZzJXCotK6BIUBBqpd4ib5LZTZVJIJkB7b_v0AVEpZ5sy49fW34ROqDkmFKmTq7np8eECEoqKrfQLiWtqqQU7Yd3-Q76VMpvQkjdEr6NdlhNp4I2u-jX3fdZdeqj9XGJb3ManI_4eixQVp7iy4IBz10cMgR855ZjgCFlnDo8sytXfIr4FobVE6wLnuYugk-LAGVIPeyjjx2E4j6_xD308_zsx_xbdXVzcTmfXVVGcDZUreKNYI5RIiUoYUxdK2NALBpuTdNQKWjbKgnGOmOtItJ01rAJYAooB8730NeN7v246J01m2P1ffY95LVO4PW_nehXepketZBMckYngS8vAjk9jK4MuvfFuBAgujQWTRvCiKqFekaPNqjJqZTsurc1lOhnM_Rkhv5rhqZywg_fn_YGv35_ApoN4GOXcg9PKQerB1iHlLsM0fii-X-l_wAA5pdp</addsrcrecordid><sourcetype>Open Access Repository</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1702086481</pqid></control><display><type>article</type><title>RNA-Binding Protein Musashi1 Is a Central Regulator of Adhesion Pathways in Glioblastoma</title><source>MEDLINE</source><source>EZB-FREE-00999 freely available EZB journals</source><source>PubMed Central</source><source>Alma/SFX Local Collection</source><creator>Uren, Philip J. ; Vo, Dat T. ; de Araujo, Patricia Rosa ; Pötschke, Rebecca ; Burns, Suzanne C. ; Bahrami-Samani, Emad ; Qiao, Mei ; de Sousa Abreu, Raquel ; Nakaya, Helder I. ; Correa, Bruna R. ; Kühnöl, Caspar ; Ule, Jernej ; Martindale, Jennifer L. ; Abdelmohsen, Kotb ; Gorospe, Myriam ; Smith, Andrew D. ; Penalva, Luiz O. F.</creator><creatorcontrib>Uren, Philip J. ; Vo, Dat T. ; de Araujo, Patricia Rosa ; Pötschke, Rebecca ; Burns, Suzanne C. ; Bahrami-Samani, Emad ; Qiao, Mei ; de Sousa Abreu, Raquel ; Nakaya, Helder I. ; Correa, Bruna R. ; Kühnöl, Caspar ; Ule, Jernej ; Martindale, Jennifer L. ; Abdelmohsen, Kotb ; Gorospe, Myriam ; Smith, Andrew D. ; Penalva, Luiz O. F.</creatorcontrib><description>The conserved RNA-binding protein Musashi1 (MSI1) has emerged as a key oncogenic factor in numerous solid tumors, including glioblastoma. However, its mechanism of action has not yet been established comprehensively. To identify its target genes comprehensively and determine the main routes by which it influences glioblastoma phenotypes, we conducted individual-nucleotide resolution cross-linking and immunoprecipitation (iCLIP) experiments. We confirmed that MSI1 has a preference for UAG sequences contained in a particular structural context, especially in 3′ untranslated regions. Although numerous binding sites were also identified in intronic sequences, our RNA transcriptome sequencing analysis does not favor the idea that MSI1 is a major regulator of splicing in glioblastoma cells. MSI1 target mRNAs encode proteins that function in multiple pathways of cell proliferation and cell adhesion. Since these associations indicate potentially new roles for MSI1, we investigated its impact on glioblastoma cell adhesion, morphology, migration, and invasion. These processes are known to underpin the spread and relapse of glioblastoma, in contrast to other tumors where metastasis is the main driver of recurrence and progression.</description><identifier>ISSN: 1098-5549</identifier><identifier>ISSN: 0270-7306</identifier><identifier>EISSN: 1098-5549</identifier><identifier>DOI: 10.1128/MCB.00410-15</identifier><identifier>PMID: 26100017</identifier><language>eng</language><publisher>United States: Taylor &amp; Francis</publisher><subject>3' Untranslated Regions - genetics ; Alternative Splicing - genetics ; Base Sequence ; Binding Sites - genetics ; Cell Adhesion - genetics ; Cell Line, Tumor ; Cell Movement - genetics ; Cell Proliferation - genetics ; Cell Survival - genetics ; Glioblastoma - genetics ; Glioblastoma - pathology ; Humans ; Neoplasm Invasiveness - genetics ; Neoplasm Invasiveness - pathology ; Nerve Tissue Proteins - biosynthesis ; Nerve Tissue Proteins - genetics ; RNA Interference ; RNA, Small Interfering ; RNA-Binding Proteins - biosynthesis ; RNA-Binding Proteins - genetics ; Sequence Analysis, RNA</subject><ispartof>Molecular and cellular biology, 2015-09, Vol.35 (17), p.2965-2978</ispartof><rights>Copyright © 2015, American Society for Microbiology 2015</rights><rights>Copyright © 2015, American Society for Microbiology. All Rights Reserved.</rights><rights>Copyright © 2015, American Society for Microbiology. All Rights Reserved. 2015 American Society for Microbiology</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c432t-983742e21055a84cc668cca4b73dc7715419985acdecdd805cfdc2ca428a13a33</citedby><cites>FETCH-LOGICAL-c432t-983742e21055a84cc668cca4b73dc7715419985acdecdd805cfdc2ca428a13a33</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4525321/pdf/$$EPDF$$P50$$Gpubmedcentral$$H</linktopdf><linktohtml>$$Uhttps://www.ncbi.nlm.nih.gov/pmc/articles/PMC4525321/$$EHTML$$P50$$Gpubmedcentral$$H</linktohtml><link.rule.ids>230,315,728,781,785,886,27929,27930,53796,53798</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/26100017$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Uren, Philip J.</creatorcontrib><creatorcontrib>Vo, Dat T.</creatorcontrib><creatorcontrib>de Araujo, Patricia Rosa</creatorcontrib><creatorcontrib>Pötschke, Rebecca</creatorcontrib><creatorcontrib>Burns, Suzanne C.</creatorcontrib><creatorcontrib>Bahrami-Samani, Emad</creatorcontrib><creatorcontrib>Qiao, Mei</creatorcontrib><creatorcontrib>de Sousa Abreu, Raquel</creatorcontrib><creatorcontrib>Nakaya, Helder I.</creatorcontrib><creatorcontrib>Correa, Bruna R.</creatorcontrib><creatorcontrib>Kühnöl, Caspar</creatorcontrib><creatorcontrib>Ule, Jernej</creatorcontrib><creatorcontrib>Martindale, Jennifer L.</creatorcontrib><creatorcontrib>Abdelmohsen, Kotb</creatorcontrib><creatorcontrib>Gorospe, Myriam</creatorcontrib><creatorcontrib>Smith, Andrew D.</creatorcontrib><creatorcontrib>Penalva, Luiz O. F.</creatorcontrib><title>RNA-Binding Protein Musashi1 Is a Central Regulator of Adhesion Pathways in Glioblastoma</title><title>Molecular and cellular biology</title><addtitle>Mol Cell Biol</addtitle><description>The conserved RNA-binding protein Musashi1 (MSI1) has emerged as a key oncogenic factor in numerous solid tumors, including glioblastoma. However, its mechanism of action has not yet been established comprehensively. To identify its target genes comprehensively and determine the main routes by which it influences glioblastoma phenotypes, we conducted individual-nucleotide resolution cross-linking and immunoprecipitation (iCLIP) experiments. We confirmed that MSI1 has a preference for UAG sequences contained in a particular structural context, especially in 3′ untranslated regions. Although numerous binding sites were also identified in intronic sequences, our RNA transcriptome sequencing analysis does not favor the idea that MSI1 is a major regulator of splicing in glioblastoma cells. MSI1 target mRNAs encode proteins that function in multiple pathways of cell proliferation and cell adhesion. Since these associations indicate potentially new roles for MSI1, we investigated its impact on glioblastoma cell adhesion, morphology, migration, and invasion. These processes are known to underpin the spread and relapse of glioblastoma, in contrast to other tumors where metastasis is the main driver of recurrence and progression.</description><subject>3' Untranslated Regions - genetics</subject><subject>Alternative Splicing - genetics</subject><subject>Base Sequence</subject><subject>Binding Sites - genetics</subject><subject>Cell Adhesion - genetics</subject><subject>Cell Line, Tumor</subject><subject>Cell Movement - genetics</subject><subject>Cell Proliferation - genetics</subject><subject>Cell Survival - genetics</subject><subject>Glioblastoma - genetics</subject><subject>Glioblastoma - pathology</subject><subject>Humans</subject><subject>Neoplasm Invasiveness - genetics</subject><subject>Neoplasm Invasiveness - pathology</subject><subject>Nerve Tissue Proteins - biosynthesis</subject><subject>Nerve Tissue Proteins - genetics</subject><subject>RNA Interference</subject><subject>RNA, Small Interfering</subject><subject>RNA-Binding Proteins - biosynthesis</subject><subject>RNA-Binding Proteins - genetics</subject><subject>Sequence Analysis, RNA</subject><issn>1098-5549</issn><issn>0270-7306</issn><issn>1098-5549</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNptkU1PHDEMhiPUCij0xhnl2AMD-ZzJXCotK6BIUBBqpd4ib5LZTZVJIJkB7b_v0AVEpZ5sy49fW34ROqDkmFKmTq7np8eECEoqKrfQLiWtqqQU7Yd3-Q76VMpvQkjdEr6NdlhNp4I2u-jX3fdZdeqj9XGJb3ManI_4eixQVp7iy4IBz10cMgR855ZjgCFlnDo8sytXfIr4FobVE6wLnuYugk-LAGVIPeyjjx2E4j6_xD308_zsx_xbdXVzcTmfXVVGcDZUreKNYI5RIiUoYUxdK2NALBpuTdNQKWjbKgnGOmOtItJ01rAJYAooB8730NeN7v246J01m2P1ffY95LVO4PW_nehXepketZBMckYngS8vAjk9jK4MuvfFuBAgujQWTRvCiKqFekaPNqjJqZTsurc1lOhnM_Rkhv5rhqZywg_fn_YGv35_ApoN4GOXcg9PKQerB1iHlLsM0fii-X-l_wAA5pdp</recordid><startdate>20150901</startdate><enddate>20150901</enddate><creator>Uren, Philip J.</creator><creator>Vo, Dat T.</creator><creator>de Araujo, Patricia Rosa</creator><creator>Pötschke, Rebecca</creator><creator>Burns, Suzanne C.</creator><creator>Bahrami-Samani, Emad</creator><creator>Qiao, Mei</creator><creator>de Sousa Abreu, Raquel</creator><creator>Nakaya, Helder I.</creator><creator>Correa, Bruna R.</creator><creator>Kühnöl, Caspar</creator><creator>Ule, Jernej</creator><creator>Martindale, Jennifer L.</creator><creator>Abdelmohsen, Kotb</creator><creator>Gorospe, Myriam</creator><creator>Smith, Andrew D.</creator><creator>Penalva, Luiz O. F.</creator><general>Taylor &amp; Francis</general><general>American Society for Microbiology</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>20150901</creationdate><title>RNA-Binding Protein Musashi1 Is a Central Regulator of Adhesion Pathways in Glioblastoma</title><author>Uren, Philip J. ; Vo, Dat T. ; de Araujo, Patricia Rosa ; Pötschke, Rebecca ; Burns, Suzanne C. ; Bahrami-Samani, Emad ; Qiao, Mei ; de Sousa Abreu, Raquel ; Nakaya, Helder I. ; Correa, Bruna R. ; Kühnöl, Caspar ; Ule, Jernej ; Martindale, Jennifer L. ; Abdelmohsen, Kotb ; Gorospe, Myriam ; Smith, Andrew D. ; Penalva, Luiz O. F.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c432t-983742e21055a84cc668cca4b73dc7715419985acdecdd805cfdc2ca428a13a33</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>3' Untranslated Regions - genetics</topic><topic>Alternative Splicing - genetics</topic><topic>Base Sequence</topic><topic>Binding Sites - genetics</topic><topic>Cell Adhesion - genetics</topic><topic>Cell Line, Tumor</topic><topic>Cell Movement - genetics</topic><topic>Cell Proliferation - genetics</topic><topic>Cell Survival - genetics</topic><topic>Glioblastoma - genetics</topic><topic>Glioblastoma - pathology</topic><topic>Humans</topic><topic>Neoplasm Invasiveness - genetics</topic><topic>Neoplasm Invasiveness - pathology</topic><topic>Nerve Tissue Proteins - biosynthesis</topic><topic>Nerve Tissue Proteins - genetics</topic><topic>RNA Interference</topic><topic>RNA, Small Interfering</topic><topic>RNA-Binding Proteins - biosynthesis</topic><topic>RNA-Binding Proteins - genetics</topic><topic>Sequence Analysis, RNA</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Uren, Philip J.</creatorcontrib><creatorcontrib>Vo, Dat T.</creatorcontrib><creatorcontrib>de Araujo, Patricia Rosa</creatorcontrib><creatorcontrib>Pötschke, Rebecca</creatorcontrib><creatorcontrib>Burns, Suzanne C.</creatorcontrib><creatorcontrib>Bahrami-Samani, Emad</creatorcontrib><creatorcontrib>Qiao, Mei</creatorcontrib><creatorcontrib>de Sousa Abreu, Raquel</creatorcontrib><creatorcontrib>Nakaya, Helder I.</creatorcontrib><creatorcontrib>Correa, Bruna R.</creatorcontrib><creatorcontrib>Kühnöl, Caspar</creatorcontrib><creatorcontrib>Ule, Jernej</creatorcontrib><creatorcontrib>Martindale, Jennifer L.</creatorcontrib><creatorcontrib>Abdelmohsen, Kotb</creatorcontrib><creatorcontrib>Gorospe, Myriam</creatorcontrib><creatorcontrib>Smith, Andrew D.</creatorcontrib><creatorcontrib>Penalva, Luiz O. F.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Molecular and cellular biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Uren, Philip J.</au><au>Vo, Dat T.</au><au>de Araujo, Patricia Rosa</au><au>Pötschke, Rebecca</au><au>Burns, Suzanne C.</au><au>Bahrami-Samani, Emad</au><au>Qiao, Mei</au><au>de Sousa Abreu, Raquel</au><au>Nakaya, Helder I.</au><au>Correa, Bruna R.</au><au>Kühnöl, Caspar</au><au>Ule, Jernej</au><au>Martindale, Jennifer L.</au><au>Abdelmohsen, Kotb</au><au>Gorospe, Myriam</au><au>Smith, Andrew D.</au><au>Penalva, Luiz O. F.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>RNA-Binding Protein Musashi1 Is a Central Regulator of Adhesion Pathways in Glioblastoma</atitle><jtitle>Molecular and cellular biology</jtitle><addtitle>Mol Cell Biol</addtitle><date>2015-09-01</date><risdate>2015</risdate><volume>35</volume><issue>17</issue><spage>2965</spage><epage>2978</epage><pages>2965-2978</pages><issn>1098-5549</issn><issn>0270-7306</issn><eissn>1098-5549</eissn><abstract>The conserved RNA-binding protein Musashi1 (MSI1) has emerged as a key oncogenic factor in numerous solid tumors, including glioblastoma. However, its mechanism of action has not yet been established comprehensively. To identify its target genes comprehensively and determine the main routes by which it influences glioblastoma phenotypes, we conducted individual-nucleotide resolution cross-linking and immunoprecipitation (iCLIP) experiments. We confirmed that MSI1 has a preference for UAG sequences contained in a particular structural context, especially in 3′ untranslated regions. Although numerous binding sites were also identified in intronic sequences, our RNA transcriptome sequencing analysis does not favor the idea that MSI1 is a major regulator of splicing in glioblastoma cells. MSI1 target mRNAs encode proteins that function in multiple pathways of cell proliferation and cell adhesion. Since these associations indicate potentially new roles for MSI1, we investigated its impact on glioblastoma cell adhesion, morphology, migration, and invasion. These processes are known to underpin the spread and relapse of glioblastoma, in contrast to other tumors where metastasis is the main driver of recurrence and progression.</abstract><cop>United States</cop><pub>Taylor &amp; Francis</pub><pmid>26100017</pmid><doi>10.1128/MCB.00410-15</doi><tpages>14</tpages><oa>free_for_read</oa></addata></record>
fulltext fulltext
identifier ISSN: 1098-5549
ispartof Molecular and cellular biology, 2015-09, Vol.35 (17), p.2965-2978
issn 1098-5549
0270-7306
1098-5549
language eng
recordid cdi_proquest_miscellaneous_1702086481
source MEDLINE; EZB-FREE-00999 freely available EZB journals; PubMed Central; Alma/SFX Local Collection
subjects 3' Untranslated Regions - genetics
Alternative Splicing - genetics
Base Sequence
Binding Sites - genetics
Cell Adhesion - genetics
Cell Line, Tumor
Cell Movement - genetics
Cell Proliferation - genetics
Cell Survival - genetics
Glioblastoma - genetics
Glioblastoma - pathology
Humans
Neoplasm Invasiveness - genetics
Neoplasm Invasiveness - pathology
Nerve Tissue Proteins - biosynthesis
Nerve Tissue Proteins - genetics
RNA Interference
RNA, Small Interfering
RNA-Binding Proteins - biosynthesis
RNA-Binding Proteins - genetics
Sequence Analysis, RNA
title RNA-Binding Protein Musashi1 Is a Central Regulator of Adhesion Pathways in Glioblastoma
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-16T12%3A08%3A44IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=RNA-Binding%20Protein%20Musashi1%20Is%20a%20Central%20Regulator%20of%20Adhesion%20Pathways%20in%20Glioblastoma&rft.jtitle=Molecular%20and%20cellular%20biology&rft.au=Uren,%20Philip%20J.&rft.date=2015-09-01&rft.volume=35&rft.issue=17&rft.spage=2965&rft.epage=2978&rft.pages=2965-2978&rft.issn=1098-5549&rft.eissn=1098-5549&rft_id=info:doi/10.1128/MCB.00410-15&rft_dat=%3Cproquest_cross%3E1702086481%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=1702086481&rft_id=info:pmid/26100017&rfr_iscdi=true