Direct Evidence for a Peroxide Intermediate and a Reactive Enzyme-Substrate-Dioxygen Configuration in a Cofactor-free Oxidase

Cofactor‐free oxidases and oxygenases promote and control the reactivity of O2 with limited chemical tools at their disposal. Their mechanism of action is not completely understood and structural information is not available for any of the reaction intermediates. Near‐atomic resolution crystallograp...

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Veröffentlicht in:Angewandte Chemie 2014-12, Vol.126 (50), p.13930-13934
Hauptverfasser: Bui, Soi, von Stetten, David, Jambrina, Pablo G., Prangé, Thierry, Colloc'h, Nathalie, de Sanctis, Daniele, Royant, Antoine, Rosta, Edina, Steiner, Roberto A.
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Sprache:eng ; ger
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Zusammenfassung:Cofactor‐free oxidases and oxygenases promote and control the reactivity of O2 with limited chemical tools at their disposal. Their mechanism of action is not completely understood and structural information is not available for any of the reaction intermediates. Near‐atomic resolution crystallography supported by in crystallo Raman spectroscopy and QM/MM calculations showed unambiguously that the archetypical cofactor‐free uricase catalyzes uric acid degradation via a C5(S)‐(hydro)peroxide intermediate. Low X‐ray doses break specifically the intermediate C5OO(H) bond at 100 K, thus releasing O2 in situ, which is trapped above the substrate radical. The dose‐dependent rate of bond rupture followed by combined crystallographic and Raman analysis indicates that ionizing radiation kick‐starts both peroxide decomposition and its regeneration. Peroxidation can be explained by a mechanism in which the substrate radical recombines with superoxide transiently produced in the active site. Peroxid‐Intermediat: Röntgenkristallographie in Kombination mit Raman‐Spektroskopie und QM/MM‐Methoden zeigt, dass die archetypische Cofaktor‐freie Uricase den Urat‐Abbau über ein C5(S)‐Peroxidintermediat katalysiert. Röntgenstrahlen spalten die C‐O‐Bindung im C5‐OOH‐Peroxid und setzen in situ Disauerstoff frei. Dies lässt Rückschlüsse auf die Konfiguration der Reaktanten zu, die zur Bildung des Peroxo‐Intermediats führt.
ISSN:0044-8249
1521-3757
DOI:10.1002/ange.201405485