Antibody Activation using DNA-Based Logic Gates
Oligonucleotide‐based molecular circuits offer the exciting possibility to introduce autonomous signal processing in biomedicine, synthetic biology, and molecular diagnostics. Here we introduce bivalent peptide–DNA conjugates as generic, noncovalent, and easily applicable molecular locks that allow...
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Veröffentlicht in: | Angewandte Chemie 2015-02, Vol.127 (8), p.2560-2563 |
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description | Oligonucleotide‐based molecular circuits offer the exciting possibility to introduce autonomous signal processing in biomedicine, synthetic biology, and molecular diagnostics. Here we introduce bivalent peptide–DNA conjugates as generic, noncovalent, and easily applicable molecular locks that allow the control of antibody activity using toehold‐mediated strand displacement reactions. Employing yeast as a cellular model system, reversible control of antibody targeting is demonstrated with low nM concentrations of peptide–DNA locks and oligonucleotide displacer strands. Introduction of two different toehold strands on the peptide–DNA lock allowed signal integration of two different inputs, yielding logic OR‐ and AND‐gates. The range of molecular inputs could be further extended to protein‐based triggers by using protein‐binding aptamers.
Antikörper‐Logikverknüpfungen: Bivalente Peptid‐DNA‐Konjugate werden als generische, nichtkovalente molekulare Schlösser verwendet, die eine Steuerung der Antikörperaktivität mithilfe eines Brückenkopf‐vermittelten Strangaustauschs ermöglichen. Durch die Kombination von Antikörper‐Erkennung und DNA‐Rechnungen erlaubt diese Methode die Einführung einer autonomen Signalprozessierung beim antikörperbasierten Targeting. |
doi_str_mv | 10.1002/ange.201410779 |
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Antikörper‐Logikverknüpfungen: Bivalente Peptid‐DNA‐Konjugate werden als generische, nichtkovalente molekulare Schlösser verwendet, die eine Steuerung der Antikörperaktivität mithilfe eines Brückenkopf‐vermittelten Strangaustauschs ermöglichen. Durch die Kombination von Antikörper‐Erkennung und DNA‐Rechnungen erlaubt diese Methode die Einführung einer autonomen Signalprozessierung beim antikörperbasierten Targeting.</description><identifier>ISSN: 0044-8249</identifier><identifier>EISSN: 1521-3757</identifier><identifier>DOI: 10.1002/ange.201410779</identifier><language>eng</language><publisher>Weinheim: WILEY-VCH Verlag</publisher><subject>Activation ; Antibodies ; Antikörper ; Aptamere ; Autonomous ; Cellular ; Chemistry ; Deoxyribonucleic acid ; Displacement ; DNA ; DNA-Nanotechnologie ; Locks ; Logic ; Molekulares Computing ; Peptid-Oligonukleotid-Konjugate ; Peptides ; Strands</subject><ispartof>Angewandte Chemie, 2015-02, Vol.127 (8), p.2560-2563</ispartof><rights>2015 WILEY‐VCH Verlag GmbH & Co. KGaA, Weinheim</rights><rights>2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c2669-e812e3ac1b4c64063134da860939d1edc8840928260118010c5f2f5e7a687093</citedby><cites>FETCH-LOGICAL-c2669-e812e3ac1b4c64063134da860939d1edc8840928260118010c5f2f5e7a687093</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1002%2Fange.201410779$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1002%2Fange.201410779$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,780,784,1416,27922,27923,45572,45573</link.rule.ids></links><search><creatorcontrib>Janssen, Brian M. G.</creatorcontrib><creatorcontrib>van Rosmalen, Martijn</creatorcontrib><creatorcontrib>van Beek, Lotte</creatorcontrib><creatorcontrib>Merkx, Maarten</creatorcontrib><title>Antibody Activation using DNA-Based Logic Gates</title><title>Angewandte Chemie</title><addtitle>Angew. Chem</addtitle><description>Oligonucleotide‐based molecular circuits offer the exciting possibility to introduce autonomous signal processing in biomedicine, synthetic biology, and molecular diagnostics. Here we introduce bivalent peptide–DNA conjugates as generic, noncovalent, and easily applicable molecular locks that allow the control of antibody activity using toehold‐mediated strand displacement reactions. Employing yeast as a cellular model system, reversible control of antibody targeting is demonstrated with low nM concentrations of peptide–DNA locks and oligonucleotide displacer strands. Introduction of two different toehold strands on the peptide–DNA lock allowed signal integration of two different inputs, yielding logic OR‐ and AND‐gates. The range of molecular inputs could be further extended to protein‐based triggers by using protein‐binding aptamers.
Antikörper‐Logikverknüpfungen: Bivalente Peptid‐DNA‐Konjugate werden als generische, nichtkovalente molekulare Schlösser verwendet, die eine Steuerung der Antikörperaktivität mithilfe eines Brückenkopf‐vermittelten Strangaustauschs ermöglichen. Durch die Kombination von Antikörper‐Erkennung und DNA‐Rechnungen erlaubt diese Methode die Einführung einer autonomen Signalprozessierung beim antikörperbasierten Targeting.</description><subject>Activation</subject><subject>Antibodies</subject><subject>Antikörper</subject><subject>Aptamere</subject><subject>Autonomous</subject><subject>Cellular</subject><subject>Chemistry</subject><subject>Deoxyribonucleic acid</subject><subject>Displacement</subject><subject>DNA</subject><subject>DNA-Nanotechnologie</subject><subject>Locks</subject><subject>Logic</subject><subject>Molekulares Computing</subject><subject>Peptid-Oligonukleotid-Konjugate</subject><subject>Peptides</subject><subject>Strands</subject><issn>0044-8249</issn><issn>1521-3757</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><recordid>eNqFkU1PwkAQhjdGExG9em7ixUthZrvdj2NFrCaIFxK9bZbtQhahxW5R-feWYIjxwlzm8jyTmXcIuUboIQDtm3LuehSQIQihTkgHU4pxIlJxSjoAjMWSMnVOLkJYAACnQnVIPysbP62KbZTZxn-axldltAm-nEf34yy-M8EV0aiaexvlpnHhkpzNzDK4q9_eJZOH4WTwGI9e8qdBNoot5VzFTiJ1ibE4ZZYz4AkmrDCSg0pUga6wUjJQVFIOiBIQbDqjs9QJw6VooS653Y9d19XHxoVGr3ywbrk0pas2QaMAUIIpIY6jnEuayrZa9OYfuqg2ddne0VIpEwqxXbVLenvK1lUItZvpde1Xpt5qBL1LWu-S1oekW0HthS-_dNsjtM7G-fCvG-9dHxr3fXBN_a65aH-nX8e5HlDM08Hzm-bJD3EzjIo</recordid><startdate>20150216</startdate><enddate>20150216</enddate><creator>Janssen, Brian M. 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G.</creatorcontrib><creatorcontrib>van Rosmalen, Martijn</creatorcontrib><creatorcontrib>van Beek, Lotte</creatorcontrib><creatorcontrib>Merkx, Maarten</creatorcontrib><collection>Istex</collection><collection>CrossRef</collection><collection>Engineered Materials Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>METADEX</collection><collection>Technology Research Database</collection><collection>Materials Research Database</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>Nucleic Acids Abstracts</collection><jtitle>Angewandte Chemie</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Janssen, Brian M. G.</au><au>van Rosmalen, Martijn</au><au>van Beek, Lotte</au><au>Merkx, Maarten</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Antibody Activation using DNA-Based Logic Gates</atitle><jtitle>Angewandte Chemie</jtitle><addtitle>Angew. Chem</addtitle><date>2015-02-16</date><risdate>2015</risdate><volume>127</volume><issue>8</issue><spage>2560</spage><epage>2563</epage><pages>2560-2563</pages><issn>0044-8249</issn><eissn>1521-3757</eissn><abstract>Oligonucleotide‐based molecular circuits offer the exciting possibility to introduce autonomous signal processing in biomedicine, synthetic biology, and molecular diagnostics. Here we introduce bivalent peptide–DNA conjugates as generic, noncovalent, and easily applicable molecular locks that allow the control of antibody activity using toehold‐mediated strand displacement reactions. Employing yeast as a cellular model system, reversible control of antibody targeting is demonstrated with low nM concentrations of peptide–DNA locks and oligonucleotide displacer strands. Introduction of two different toehold strands on the peptide–DNA lock allowed signal integration of two different inputs, yielding logic OR‐ and AND‐gates. The range of molecular inputs could be further extended to protein‐based triggers by using protein‐binding aptamers.
Antikörper‐Logikverknüpfungen: Bivalente Peptid‐DNA‐Konjugate werden als generische, nichtkovalente molekulare Schlösser verwendet, die eine Steuerung der Antikörperaktivität mithilfe eines Brückenkopf‐vermittelten Strangaustauschs ermöglichen. Durch die Kombination von Antikörper‐Erkennung und DNA‐Rechnungen erlaubt diese Methode die Einführung einer autonomen Signalprozessierung beim antikörperbasierten Targeting.</abstract><cop>Weinheim</cop><pub>WILEY-VCH Verlag</pub><doi>10.1002/ange.201410779</doi><tpages>4</tpages></addata></record> |
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subjects | Activation Antibodies Antikörper Aptamere Autonomous Cellular Chemistry Deoxyribonucleic acid Displacement DNA DNA-Nanotechnologie Locks Logic Molekulares Computing Peptid-Oligonukleotid-Konjugate Peptides Strands |
title | Antibody Activation using DNA-Based Logic Gates |
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