Computational Biotransformation Profile of Paracetamol Catalyzed by Cytochrome P450
The P450-catalyzed biotransformation of the analgesic drug paracetamol (PAR) is a long-debated topic, involving different mechanistic hypotheses as well as experimental evidence for the metabolites N-acetyl-p-benzoquinone imine (NAPQI), p-benzoquinone, acetamide, and 3-hydroxy-PAR. During the cataly...
Gespeichert in:
Veröffentlicht in: | Chemical research in toxicology 2015-04, Vol.28 (4), p.585-596 |
---|---|
Hauptverfasser: | , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | 596 |
---|---|
container_issue | 4 |
container_start_page | 585 |
container_title | Chemical research in toxicology |
container_volume | 28 |
creator | Ji, Li Schüürmann, Gerrit |
description | The P450-catalyzed biotransformation of the analgesic drug paracetamol (PAR) is a long-debated topic, involving different mechanistic hypotheses as well as experimental evidence for the metabolites N-acetyl-p-benzoquinone imine (NAPQI), p-benzoquinone, acetamide, and 3-hydroxy-PAR. During the catalytic cycle of P450, a high-valent iron(IV)-oxo species known as Compound I (Cpd I) is formed as the ultimate oxidant, featuring two energetically close-lying ground states in the doublet (low-spin) and quartet (high-spin) spin states, respectively. In order to clarify the catalytic mechanism, a computational chemistry analysis has been undertaken for both the high- and low-spin routes, employing density functional theory (DFT) including PCM (polarized continuum-solvation model) that yields an approximate simulation of the bulk polarization exerted through the protein. The results demonstrate that hydrogen abstraction transfer (HAT) by the P450 oxidant Cpd I (FeO) is kinetically strongly preferred over the alternative pathways of an oxygen addition reaction (OAR) or two consecutive single-electron transfers (SET). Moreover, only the respective high-spin route yields N-acetyl-p-semiquinone imine (NAPSQI) as an intermediate that is converted to the electrophile N-acetyl-p-benzoquinone imine (NAPQI). By contrast, 3-hydroxy-PAR, acetamide, and p-benzoquinone as electrophilic and redox-active agent are formed predominantly in the low-spin state through reactions that do not involve NAPSQI. Thus, all experimentally observed PAR metabolites are in accord with an initial HAT from the phenolic oxygen, and NAPSQI should indeed be the precursor of NAPQI, both of which are generated only via the high-spin pathway. |
doi_str_mv | 10.1021/tx5003645 |
format | Article |
fullrecord | <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_1694982891</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><sourcerecordid>1694982891</sourcerecordid><originalsourceid>FETCH-LOGICAL-a348t-f6975debdf823008d2b97fa78f2081b9e1a6ced5cd8f092e92f208acdc27fda03</originalsourceid><addsrcrecordid>eNpt0EtLxDAUhuEgio6jC_-AdCPoonqSNtNkqcUbDDiggrtymgtW2smYpGD99VZHZ-UqcPLwLV5CjiicU2D0In5wgGyW8y0yoZxByoHCNpmAkFnKmHjZI_shvAHQkRe7ZI9xngvJ8wl5LF236iPGxi2xTa4aFz0ug3W--7klC-9s05rE2WSBHpWJ2Lk2KTFiO3wandRDUg7RqVfvOpMscg4HZMdiG8zh7zslzzfXT-VdOn-4vS8v5ylmuYipncmCa1NrK1gGIDSrZWGxEJaBoLU0FGfKaK60sCCZkez7A5VWrLAaIZuS0_Xuyrv33oRYdU1Qpm1xaVwfKjqTuRRMSDrSszVV3oXgja1WvunQDxWF6rthtWk42uPf2b7ujN7Iv2gjOFkDVKF6c70fy4V_hr4ALp14yA</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1694982891</pqid></control><display><type>article</type><title>Computational Biotransformation Profile of Paracetamol Catalyzed by Cytochrome P450</title><source>ACS Publications</source><source>MEDLINE</source><creator>Ji, Li ; Schüürmann, Gerrit</creator><creatorcontrib>Ji, Li ; Schüürmann, Gerrit</creatorcontrib><description>The P450-catalyzed biotransformation of the analgesic drug paracetamol (PAR) is a long-debated topic, involving different mechanistic hypotheses as well as experimental evidence for the metabolites N-acetyl-p-benzoquinone imine (NAPQI), p-benzoquinone, acetamide, and 3-hydroxy-PAR. During the catalytic cycle of P450, a high-valent iron(IV)-oxo species known as Compound I (Cpd I) is formed as the ultimate oxidant, featuring two energetically close-lying ground states in the doublet (low-spin) and quartet (high-spin) spin states, respectively. In order to clarify the catalytic mechanism, a computational chemistry analysis has been undertaken for both the high- and low-spin routes, employing density functional theory (DFT) including PCM (polarized continuum-solvation model) that yields an approximate simulation of the bulk polarization exerted through the protein. The results demonstrate that hydrogen abstraction transfer (HAT) by the P450 oxidant Cpd I (FeO) is kinetically strongly preferred over the alternative pathways of an oxygen addition reaction (OAR) or two consecutive single-electron transfers (SET). Moreover, only the respective high-spin route yields N-acetyl-p-semiquinone imine (NAPSQI) as an intermediate that is converted to the electrophile N-acetyl-p-benzoquinone imine (NAPQI). By contrast, 3-hydroxy-PAR, acetamide, and p-benzoquinone as electrophilic and redox-active agent are formed predominantly in the low-spin state through reactions that do not involve NAPSQI. Thus, all experimentally observed PAR metabolites are in accord with an initial HAT from the phenolic oxygen, and NAPSQI should indeed be the precursor of NAPQI, both of which are generated only via the high-spin pathway.</description><identifier>ISSN: 0893-228X</identifier><identifier>EISSN: 1520-5010</identifier><identifier>DOI: 10.1021/tx5003645</identifier><identifier>PMID: 25548954</identifier><language>eng</language><publisher>United States: American Chemical Society</publisher><subject>Acetaminophen - pharmacokinetics ; Analgesics - pharmacokinetics ; Biotransformation ; Catalysis ; Computational Biology ; Cytochrome P-450 Enzyme System - metabolism</subject><ispartof>Chemical research in toxicology, 2015-04, Vol.28 (4), p.585-596</ispartof><rights>Copyright © American Chemical Society</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-a348t-f6975debdf823008d2b97fa78f2081b9e1a6ced5cd8f092e92f208acdc27fda03</citedby><cites>FETCH-LOGICAL-a348t-f6975debdf823008d2b97fa78f2081b9e1a6ced5cd8f092e92f208acdc27fda03</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://pubs.acs.org/doi/pdf/10.1021/tx5003645$$EPDF$$P50$$Gacs$$H</linktopdf><linktohtml>$$Uhttps://pubs.acs.org/doi/10.1021/tx5003645$$EHTML$$P50$$Gacs$$H</linktohtml><link.rule.ids>315,781,785,2766,27081,27929,27930,56743,56793</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/25548954$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Ji, Li</creatorcontrib><creatorcontrib>Schüürmann, Gerrit</creatorcontrib><title>Computational Biotransformation Profile of Paracetamol Catalyzed by Cytochrome P450</title><title>Chemical research in toxicology</title><addtitle>Chem. Res. Toxicol</addtitle><description>The P450-catalyzed biotransformation of the analgesic drug paracetamol (PAR) is a long-debated topic, involving different mechanistic hypotheses as well as experimental evidence for the metabolites N-acetyl-p-benzoquinone imine (NAPQI), p-benzoquinone, acetamide, and 3-hydroxy-PAR. During the catalytic cycle of P450, a high-valent iron(IV)-oxo species known as Compound I (Cpd I) is formed as the ultimate oxidant, featuring two energetically close-lying ground states in the doublet (low-spin) and quartet (high-spin) spin states, respectively. In order to clarify the catalytic mechanism, a computational chemistry analysis has been undertaken for both the high- and low-spin routes, employing density functional theory (DFT) including PCM (polarized continuum-solvation model) that yields an approximate simulation of the bulk polarization exerted through the protein. The results demonstrate that hydrogen abstraction transfer (HAT) by the P450 oxidant Cpd I (FeO) is kinetically strongly preferred over the alternative pathways of an oxygen addition reaction (OAR) or two consecutive single-electron transfers (SET). Moreover, only the respective high-spin route yields N-acetyl-p-semiquinone imine (NAPSQI) as an intermediate that is converted to the electrophile N-acetyl-p-benzoquinone imine (NAPQI). By contrast, 3-hydroxy-PAR, acetamide, and p-benzoquinone as electrophilic and redox-active agent are formed predominantly in the low-spin state through reactions that do not involve NAPSQI. Thus, all experimentally observed PAR metabolites are in accord with an initial HAT from the phenolic oxygen, and NAPSQI should indeed be the precursor of NAPQI, both of which are generated only via the high-spin pathway.</description><subject>Acetaminophen - pharmacokinetics</subject><subject>Analgesics - pharmacokinetics</subject><subject>Biotransformation</subject><subject>Catalysis</subject><subject>Computational Biology</subject><subject>Cytochrome P-450 Enzyme System - metabolism</subject><issn>0893-228X</issn><issn>1520-5010</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpt0EtLxDAUhuEgio6jC_-AdCPoonqSNtNkqcUbDDiggrtymgtW2smYpGD99VZHZ-UqcPLwLV5CjiicU2D0In5wgGyW8y0yoZxByoHCNpmAkFnKmHjZI_shvAHQkRe7ZI9xngvJ8wl5LF236iPGxi2xTa4aFz0ug3W--7klC-9s05rE2WSBHpWJ2Lk2KTFiO3wandRDUg7RqVfvOpMscg4HZMdiG8zh7zslzzfXT-VdOn-4vS8v5ylmuYipncmCa1NrK1gGIDSrZWGxEJaBoLU0FGfKaK60sCCZkez7A5VWrLAaIZuS0_Xuyrv33oRYdU1Qpm1xaVwfKjqTuRRMSDrSszVV3oXgja1WvunQDxWF6rthtWk42uPf2b7ujN7Iv2gjOFkDVKF6c70fy4V_hr4ALp14yA</recordid><startdate>20150420</startdate><enddate>20150420</enddate><creator>Ji, Li</creator><creator>Schüürmann, Gerrit</creator><general>American Chemical Society</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7U7</scope><scope>C1K</scope></search><sort><creationdate>20150420</creationdate><title>Computational Biotransformation Profile of Paracetamol Catalyzed by Cytochrome P450</title><author>Ji, Li ; Schüürmann, Gerrit</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a348t-f6975debdf823008d2b97fa78f2081b9e1a6ced5cd8f092e92f208acdc27fda03</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>Acetaminophen - pharmacokinetics</topic><topic>Analgesics - pharmacokinetics</topic><topic>Biotransformation</topic><topic>Catalysis</topic><topic>Computational Biology</topic><topic>Cytochrome P-450 Enzyme System - metabolism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Ji, Li</creatorcontrib><creatorcontrib>Schüürmann, Gerrit</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Toxicology Abstracts</collection><collection>Environmental Sciences and Pollution Management</collection><jtitle>Chemical research in toxicology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Ji, Li</au><au>Schüürmann, Gerrit</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Computational Biotransformation Profile of Paracetamol Catalyzed by Cytochrome P450</atitle><jtitle>Chemical research in toxicology</jtitle><addtitle>Chem. Res. Toxicol</addtitle><date>2015-04-20</date><risdate>2015</risdate><volume>28</volume><issue>4</issue><spage>585</spage><epage>596</epage><pages>585-596</pages><issn>0893-228X</issn><eissn>1520-5010</eissn><abstract>The P450-catalyzed biotransformation of the analgesic drug paracetamol (PAR) is a long-debated topic, involving different mechanistic hypotheses as well as experimental evidence for the metabolites N-acetyl-p-benzoquinone imine (NAPQI), p-benzoquinone, acetamide, and 3-hydroxy-PAR. During the catalytic cycle of P450, a high-valent iron(IV)-oxo species known as Compound I (Cpd I) is formed as the ultimate oxidant, featuring two energetically close-lying ground states in the doublet (low-spin) and quartet (high-spin) spin states, respectively. In order to clarify the catalytic mechanism, a computational chemistry analysis has been undertaken for both the high- and low-spin routes, employing density functional theory (DFT) including PCM (polarized continuum-solvation model) that yields an approximate simulation of the bulk polarization exerted through the protein. The results demonstrate that hydrogen abstraction transfer (HAT) by the P450 oxidant Cpd I (FeO) is kinetically strongly preferred over the alternative pathways of an oxygen addition reaction (OAR) or two consecutive single-electron transfers (SET). Moreover, only the respective high-spin route yields N-acetyl-p-semiquinone imine (NAPSQI) as an intermediate that is converted to the electrophile N-acetyl-p-benzoquinone imine (NAPQI). By contrast, 3-hydroxy-PAR, acetamide, and p-benzoquinone as electrophilic and redox-active agent are formed predominantly in the low-spin state through reactions that do not involve NAPSQI. Thus, all experimentally observed PAR metabolites are in accord with an initial HAT from the phenolic oxygen, and NAPSQI should indeed be the precursor of NAPQI, both of which are generated only via the high-spin pathway.</abstract><cop>United States</cop><pub>American Chemical Society</pub><pmid>25548954</pmid><doi>10.1021/tx5003645</doi><tpages>12</tpages></addata></record> |
fulltext | fulltext |
identifier | ISSN: 0893-228X |
ispartof | Chemical research in toxicology, 2015-04, Vol.28 (4), p.585-596 |
issn | 0893-228X 1520-5010 |
language | eng |
recordid | cdi_proquest_miscellaneous_1694982891 |
source | ACS Publications; MEDLINE |
subjects | Acetaminophen - pharmacokinetics Analgesics - pharmacokinetics Biotransformation Catalysis Computational Biology Cytochrome P-450 Enzyme System - metabolism |
title | Computational Biotransformation Profile of Paracetamol Catalyzed by Cytochrome P450 |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2024-12-12T11%3A41%3A18IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Computational%20Biotransformation%20Profile%20of%20Paracetamol%20Catalyzed%20by%20Cytochrome%20P450&rft.jtitle=Chemical%20research%20in%20toxicology&rft.au=Ji,%20Li&rft.date=2015-04-20&rft.volume=28&rft.issue=4&rft.spage=585&rft.epage=596&rft.pages=585-596&rft.issn=0893-228X&rft.eissn=1520-5010&rft_id=info:doi/10.1021/tx5003645&rft_dat=%3Cproquest_cross%3E1694982891%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=1694982891&rft_id=info:pmid/25548954&rfr_iscdi=true |