Deletion of hxk1 gene results in derepression of xylose utilization in Scheffersomyces stipitis
A major problem in fermenting xylose in lignocellulosic substrates is the presence of glucose and mannose which inhibit xylose utilization. Previous studies showed that catabolite repression in some yeasts is associated with hexokinases and that deletion of one of these gene(s) could result in derep...
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Veröffentlicht in: | Journal of industrial microbiology & biotechnology 2015-06, Vol.42 (6), p.889-896 |
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description | A major problem in fermenting xylose in lignocellulosic substrates is the presence of glucose and mannose which inhibit xylose utilization. Previous studies showed that catabolite repression in some yeasts is associated with hexokinases and that deletion of one of these gene(s) could result in derepressed mutant strain(s). In this study, the hxk1 encoding hexokinase 1 in Scheffersomyces stipitis was disrupted. The ∆hxk1 SS6 strain retained the ability to utilize the main hexoses and pentoses commonly found in lignocellulosic hydrolysates as efficiently as the wild-type (WT) strain. SS6 also fermented the dominant sugars to ethanol; however, on xylose, the ∆hxk1 strain produced more xylitol and less ethanol than the WT. On mixed sugars, as expected the WT utilized glucose ahead of xylose and xylose utilization did not commence until all the glucose was consumed. In contrast, the ∆hxk1 mutant showed derepression in that it started to utilize xylose even when considerable glucose (about 1.72 %, w/v) remained in the medium. Similarly, mannose did not repress xylose utilization by the ∆hxk1 mutant and xylose and mannose were simultaneously utilized. The results are of interest in efforts to engineer yeast strains capable of efficiently utilizing glucose and xylose simultaneously for lignocellulosic biomass conversion. |
doi_str_mv | 10.1007/s10295-015-1614-9 |
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Previous studies showed that catabolite repression in some yeasts is associated with hexokinases and that deletion of one of these gene(s) could result in derepressed mutant strain(s). In this study, the hxk1 encoding hexokinase 1 in Scheffersomyces stipitis was disrupted. The ∆hxk1 SS6 strain retained the ability to utilize the main hexoses and pentoses commonly found in lignocellulosic hydrolysates as efficiently as the wild-type (WT) strain. SS6 also fermented the dominant sugars to ethanol; however, on xylose, the ∆hxk1 strain produced more xylitol and less ethanol than the WT. On mixed sugars, as expected the WT utilized glucose ahead of xylose and xylose utilization did not commence until all the glucose was consumed. In contrast, the ∆hxk1 mutant showed derepression in that it started to utilize xylose even when considerable glucose (about 1.72 %, w/v) remained in the medium. Similarly, mannose did not repress xylose utilization by the ∆hxk1 mutant and xylose and mannose were simultaneously utilized. The results are of interest in efforts to engineer yeast strains capable of efficiently utilizing glucose and xylose simultaneously for lignocellulosic biomass conversion.</description><identifier>ISSN: 1367-5435</identifier><identifier>EISSN: 1476-5535</identifier><identifier>DOI: 10.1007/s10295-015-1614-9</identifier><identifier>PMID: 25845305</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer-Verlag</publisher><subject>Analysis ; Biochemistry ; Bioenergy/Biofuels/Biochemicals ; Bioengineering ; Bioinformatics ; Biomass ; Biomedical and Life Sciences ; Biotechnology ; Dehydrogenases ; Ethanol ; Ethanol - metabolism ; Fermentation ; Gene Deletion ; Genes ; Genes, Fungal - genetics ; Genetic Engineering ; Genetics ; Glucose ; Glucose - metabolism ; hexokinase ; Hexokinase - deficiency ; Hexokinase - genetics ; hexoses ; hydrolysates ; Inorganic Chemistry ; Life Sciences ; Lignin - chemistry ; Lignin - metabolism ; Lignocellulose ; mannose ; Mannose - metabolism ; Microbiology ; Mutagenesis ; mutants ; Mutation ; pentoses ; Saccharomycetales - enzymology ; Saccharomycetales - genetics ; Saccharomycetales - metabolism ; Scheffersomyces stipitis ; Studies ; Sugar ; xylitol ; Xylitol - biosynthesis ; xylose ; Xylose - metabolism ; Yeast ; Yeasts</subject><ispartof>Journal of industrial microbiology & biotechnology, 2015-06, Vol.42 (6), p.889-896</ispartof><rights>Society for Industrial Microbiology and Biotechnology 2015</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c546t-b1bd29e899203e0e16befd2cf6c0d5ce82a4e499fb598c9d4a2fcfb51d8bf7ae3</citedby><cites>FETCH-LOGICAL-c546t-b1bd29e899203e0e16befd2cf6c0d5ce82a4e499fb598c9d4a2fcfb51d8bf7ae3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s10295-015-1614-9$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s10295-015-1614-9$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,780,784,27924,27925,41488,42557,51319</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/25845305$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Dashtban, Mehdi</creatorcontrib><creatorcontrib>Wen, Xin</creatorcontrib><creatorcontrib>Bajwa, Paramjit K</creatorcontrib><creatorcontrib>Ho, Chi-Yip</creatorcontrib><creatorcontrib>Lee, Hung</creatorcontrib><title>Deletion of hxk1 gene results in derepression of xylose utilization in Scheffersomyces stipitis</title><title>Journal of industrial microbiology & biotechnology</title><addtitle>J Ind Microbiol Biotechnol</addtitle><addtitle>J Ind Microbiol Biotechnol</addtitle><description>A major problem in fermenting xylose in lignocellulosic substrates is the presence of glucose and mannose which inhibit xylose utilization. Previous studies showed that catabolite repression in some yeasts is associated with hexokinases and that deletion of one of these gene(s) could result in derepressed mutant strain(s). In this study, the hxk1 encoding hexokinase 1 in Scheffersomyces stipitis was disrupted. The ∆hxk1 SS6 strain retained the ability to utilize the main hexoses and pentoses commonly found in lignocellulosic hydrolysates as efficiently as the wild-type (WT) strain. SS6 also fermented the dominant sugars to ethanol; however, on xylose, the ∆hxk1 strain produced more xylitol and less ethanol than the WT. On mixed sugars, as expected the WT utilized glucose ahead of xylose and xylose utilization did not commence until all the glucose was consumed. In contrast, the ∆hxk1 mutant showed derepression in that it started to utilize xylose even when considerable glucose (about 1.72 %, w/v) remained in the medium. Similarly, mannose did not repress xylose utilization by the ∆hxk1 mutant and xylose and mannose were simultaneously utilized. The results are of interest in efforts to engineer yeast strains capable of efficiently utilizing glucose and xylose simultaneously for lignocellulosic biomass conversion.</description><subject>Analysis</subject><subject>Biochemistry</subject><subject>Bioenergy/Biofuels/Biochemicals</subject><subject>Bioengineering</subject><subject>Bioinformatics</subject><subject>Biomass</subject><subject>Biomedical and Life Sciences</subject><subject>Biotechnology</subject><subject>Dehydrogenases</subject><subject>Ethanol</subject><subject>Ethanol - metabolism</subject><subject>Fermentation</subject><subject>Gene Deletion</subject><subject>Genes</subject><subject>Genes, Fungal - genetics</subject><subject>Genetic Engineering</subject><subject>Genetics</subject><subject>Glucose</subject><subject>Glucose - metabolism</subject><subject>hexokinase</subject><subject>Hexokinase - deficiency</subject><subject>Hexokinase - genetics</subject><subject>hexoses</subject><subject>hydrolysates</subject><subject>Inorganic Chemistry</subject><subject>Life Sciences</subject><subject>Lignin - chemistry</subject><subject>Lignin - metabolism</subject><subject>Lignocellulose</subject><subject>mannose</subject><subject>Mannose - metabolism</subject><subject>Microbiology</subject><subject>Mutagenesis</subject><subject>mutants</subject><subject>Mutation</subject><subject>pentoses</subject><subject>Saccharomycetales - enzymology</subject><subject>Saccharomycetales - genetics</subject><subject>Saccharomycetales - metabolism</subject><subject>Scheffersomyces stipitis</subject><subject>Studies</subject><subject>Sugar</subject><subject>xylitol</subject><subject>Xylitol - biosynthesis</subject><subject>xylose</subject><subject>Xylose - metabolism</subject><subject>Yeast</subject><subject>Yeasts</subject><issn>1367-5435</issn><issn>1476-5535</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>8G5</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><recordid>eNp9kMFOHSEUholpU63tA7ipk3TTzVRggIFlY7U1MXFhXROGOVyxc4crZybx9ulF57ZpXLiCE77_5-Qj5IjRr4zS9gQZ5UbWlMmaKSZqs0cOmGhVLWUj35R7o9paikbuk_eId5RS2bb8HdnnUgvZUHlA7HcYYIpprFKobh9-s2oFI1QZcB4mrOJY9ZBhU2bcQQ_bISFU8xSH-Mc9Rwt17W8hBMiY1lsPWOEUN3GK-IG8DW5A-Lg7D8nN-dmv05_15dWPi9Nvl7WXQk11x7qeG9DGcNoABaY6CD33QXnaSw-aOwHCmNBJo73phePBl4H1ugutg-aQfFl6Nzndz4CTXUf0MAxuhDSjZUpTI7VmqqCfX6B3ac5j2e6ZasoKihaKLZTPCTFDsJsc1y5vLaP2yb5d7Nti3z7Zt6ZkPu2a524N_b_EX90F4AuA5WlcQf7v61daj5dQcMm6VY5ob655AShlWgtlmkfq2Jqk</recordid><startdate>20150601</startdate><enddate>20150601</enddate><creator>Dashtban, Mehdi</creator><creator>Wen, Xin</creator><creator>Bajwa, Paramjit K</creator><creator>Ho, Chi-Yip</creator><creator>Lee, Hung</creator><general>Springer-Verlag</general><general>Springer Berlin Heidelberg</general><general>Oxford University Press</general><scope>FBQ</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QL</scope><scope>7QR</scope><scope>7T7</scope><scope>7WY</scope><scope>7WZ</scope><scope>7X7</scope><scope>7XB</scope><scope>87Z</scope><scope>88A</scope><scope>88E</scope><scope>88I</scope><scope>8AO</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8FL</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BEZIV</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FRNLG</scope><scope>FYUFA</scope><scope>F~G</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>HCIFZ</scope><scope>K60</scope><scope>K6~</scope><scope>K9.</scope><scope>L.-</scope><scope>LK8</scope><scope>M0C</scope><scope>M0S</scope><scope>M1P</scope><scope>M2O</scope><scope>M2P</scope><scope>M7N</scope><scope>M7P</scope><scope>MBDVC</scope><scope>P64</scope><scope>PQBIZ</scope><scope>PQBZA</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>Q9U</scope><scope>7X8</scope></search><sort><creationdate>20150601</creationdate><title>Deletion of hxk1 gene results in derepression of xylose utilization in Scheffersomyces stipitis</title><author>Dashtban, Mehdi ; Wen, Xin ; Bajwa, Paramjit K ; Ho, Chi-Yip ; Lee, Hung</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c546t-b1bd29e899203e0e16befd2cf6c0d5ce82a4e499fb598c9d4a2fcfb51d8bf7ae3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>Analysis</topic><topic>Biochemistry</topic><topic>Bioenergy/Biofuels/Biochemicals</topic><topic>Bioengineering</topic><topic>Bioinformatics</topic><topic>Biomass</topic><topic>Biomedical and Life Sciences</topic><topic>Biotechnology</topic><topic>Dehydrogenases</topic><topic>Ethanol</topic><topic>Ethanol - metabolism</topic><topic>Fermentation</topic><topic>Gene Deletion</topic><topic>Genes</topic><topic>Genes, Fungal - genetics</topic><topic>Genetic Engineering</topic><topic>Genetics</topic><topic>Glucose</topic><topic>Glucose - metabolism</topic><topic>hexokinase</topic><topic>Hexokinase - deficiency</topic><topic>Hexokinase - genetics</topic><topic>hexoses</topic><topic>hydrolysates</topic><topic>Inorganic Chemistry</topic><topic>Life Sciences</topic><topic>Lignin - chemistry</topic><topic>Lignin - metabolism</topic><topic>Lignocellulose</topic><topic>mannose</topic><topic>Mannose - metabolism</topic><topic>Microbiology</topic><topic>Mutagenesis</topic><topic>mutants</topic><topic>Mutation</topic><topic>pentoses</topic><topic>Saccharomycetales - enzymology</topic><topic>Saccharomycetales - genetics</topic><topic>Saccharomycetales - metabolism</topic><topic>Scheffersomyces stipitis</topic><topic>Studies</topic><topic>Sugar</topic><topic>xylitol</topic><topic>Xylitol - biosynthesis</topic><topic>xylose</topic><topic>Xylose - metabolism</topic><topic>Yeast</topic><topic>Yeasts</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Dashtban, Mehdi</creatorcontrib><creatorcontrib>Wen, Xin</creatorcontrib><creatorcontrib>Bajwa, Paramjit K</creatorcontrib><creatorcontrib>Ho, Chi-Yip</creatorcontrib><creatorcontrib>Lee, Hung</creatorcontrib><collection>AGRIS</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Chemoreception Abstracts</collection><collection>Industrial and Applied Microbiology Abstracts (Microbiology A)</collection><collection>Access via ABI/INFORM (ProQuest)</collection><collection>ABI/INFORM Global (PDF only)</collection><collection>ProQuest Health and Medical</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>ABI/INFORM Global (Alumni Edition)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>Science Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>ABI/INFORM Collection (Alumni Edition)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni)</collection><collection>ProQuest Central</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>ProQuest Business Premium Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Business Premium Collection (Alumni)</collection><collection>Health Research Premium Collection</collection><collection>ABI/INFORM Global (Corporate)</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Business Collection (Alumni Edition)</collection><collection>ProQuest Business Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ABI/INFORM Professional Advanced</collection><collection>ProQuest Biological Science Collection</collection><collection>ABI/INFORM global</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>ProQuest research library</collection><collection>ProQuest Science Journals</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>ProQuest Biological Science Journals</collection><collection>Research Library (Corporate)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Business</collection><collection>ProQuest One Business (Alumni)</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central Basic</collection><collection>MEDLINE - Academic</collection><jtitle>Journal of industrial microbiology & biotechnology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Dashtban, Mehdi</au><au>Wen, Xin</au><au>Bajwa, Paramjit K</au><au>Ho, Chi-Yip</au><au>Lee, Hung</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Deletion of hxk1 gene results in derepression of xylose utilization in Scheffersomyces stipitis</atitle><jtitle>Journal of industrial microbiology & biotechnology</jtitle><stitle>J Ind Microbiol Biotechnol</stitle><addtitle>J Ind Microbiol Biotechnol</addtitle><date>2015-06-01</date><risdate>2015</risdate><volume>42</volume><issue>6</issue><spage>889</spage><epage>896</epage><pages>889-896</pages><issn>1367-5435</issn><eissn>1476-5535</eissn><abstract>A major problem in fermenting xylose in lignocellulosic substrates is the presence of glucose and mannose which inhibit xylose utilization. Previous studies showed that catabolite repression in some yeasts is associated with hexokinases and that deletion of one of these gene(s) could result in derepressed mutant strain(s). In this study, the hxk1 encoding hexokinase 1 in Scheffersomyces stipitis was disrupted. The ∆hxk1 SS6 strain retained the ability to utilize the main hexoses and pentoses commonly found in lignocellulosic hydrolysates as efficiently as the wild-type (WT) strain. SS6 also fermented the dominant sugars to ethanol; however, on xylose, the ∆hxk1 strain produced more xylitol and less ethanol than the WT. On mixed sugars, as expected the WT utilized glucose ahead of xylose and xylose utilization did not commence until all the glucose was consumed. In contrast, the ∆hxk1 mutant showed derepression in that it started to utilize xylose even when considerable glucose (about 1.72 %, w/v) remained in the medium. Similarly, mannose did not repress xylose utilization by the ∆hxk1 mutant and xylose and mannose were simultaneously utilized. The results are of interest in efforts to engineer yeast strains capable of efficiently utilizing glucose and xylose simultaneously for lignocellulosic biomass conversion.</abstract><cop>Berlin/Heidelberg</cop><pub>Springer-Verlag</pub><pmid>25845305</pmid><doi>10.1007/s10295-015-1614-9</doi><tpages>8</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Analysis Biochemistry Bioenergy/Biofuels/Biochemicals Bioengineering Bioinformatics Biomass Biomedical and Life Sciences Biotechnology Dehydrogenases Ethanol Ethanol - metabolism Fermentation Gene Deletion Genes Genes, Fungal - genetics Genetic Engineering Genetics Glucose Glucose - metabolism hexokinase Hexokinase - deficiency Hexokinase - genetics hexoses hydrolysates Inorganic Chemistry Life Sciences Lignin - chemistry Lignin - metabolism Lignocellulose mannose Mannose - metabolism Microbiology Mutagenesis mutants Mutation pentoses Saccharomycetales - enzymology Saccharomycetales - genetics Saccharomycetales - metabolism Scheffersomyces stipitis Studies Sugar xylitol Xylitol - biosynthesis xylose Xylose - metabolism Yeast Yeasts |
title | Deletion of hxk1 gene results in derepression of xylose utilization in Scheffersomyces stipitis |
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