Molecular structure and organization of the human manganese superoxide dismutase gene
Human manganese superoxide dismutase (MnSOD) is one of the major cellular defense enzymes that protects against toxic effects of superoxide radicals. Overexpression of human MnSOD has been shown to inhibit radiation-induced neoplastic transformation, suppress malignancy of cancer cells, and increase...
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Veröffentlicht in: | DNA and cell biology 1994-11, Vol.13 (11), p.1127-1136 |
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creator | Wan, X S Devalaraja, M N St Clair, D K |
description | Human manganese superoxide dismutase (MnSOD) is one of the major cellular defense enzymes that protects against toxic effects of superoxide radicals. Overexpression of human MnSOD has been shown to inhibit radiation-induced neoplastic transformation, suppress malignancy of cancer cells, and increase tolerance to various toxic agents. To elucidate the human MnSOD gene structure for identification of potential regulatory elements, we isolated five lambda clones from a normal human genomic DNA library and sequenced the largest clone containing the entire human MnSOD gene. The results demonstrated that human MnSOD is a single-copy gene consisting of five exons interrupted by four introns with typical splice junctions. A distinctive transcription initiation site was identified 74 bp upstream from the translation start site. This transcription initiation site is preceded by a G + C-rich (78%) promoter region containing a cluster of seven SP1 and three AP2 consensus sequences with no TATA box or CAAT box. The 3'-flanking region of the MnSOD gene contains one NF-kappa B consensus sequence. The presence of SP1, AP2, and NF-kappa B consensus sequences suggests that these potential regulatory elements may play a role in the regulation of human MnSOD gene expression. |
doi_str_mv | 10.1089/dna.1994.13.1127 |
format | Article |
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Overexpression of human MnSOD has been shown to inhibit radiation-induced neoplastic transformation, suppress malignancy of cancer cells, and increase tolerance to various toxic agents. To elucidate the human MnSOD gene structure for identification of potential regulatory elements, we isolated five lambda clones from a normal human genomic DNA library and sequenced the largest clone containing the entire human MnSOD gene. The results demonstrated that human MnSOD is a single-copy gene consisting of five exons interrupted by four introns with typical splice junctions. A distinctive transcription initiation site was identified 74 bp upstream from the translation start site. This transcription initiation site is preceded by a G + C-rich (78%) promoter region containing a cluster of seven SP1 and three AP2 consensus sequences with no TATA box or CAAT box. The 3'-flanking region of the MnSOD gene contains one NF-kappa B consensus sequence. The presence of SP1, AP2, and NF-kappa B consensus sequences suggests that these potential regulatory elements may play a role in the regulation of human MnSOD gene expression.</description><identifier>ISSN: 1044-5498</identifier><identifier>EISSN: 1557-7430</identifier><identifier>DOI: 10.1089/dna.1994.13.1127</identifier><identifier>PMID: 7702755</identifier><language>eng</language><publisher>United States</publisher><subject>amino acid sequence prediction ; Animals ; Base Sequence ; Cell Line ; Consensus Sequence ; DNA - chemistry ; DNA Primers ; Embryo, Mammalian ; Exons ; Fibroblasts ; Genomic Library ; Hominidae - genetics ; Humans ; Introns ; Isoenzymes - biosynthesis ; Isoenzymes - genetics ; Lung ; man ; manganese ; MnSOD gene ; Molecular Sequence Data ; nucleotide sequence ; Promoter Regions, Genetic ; Restriction Mapping ; RNA, Messenger - analysis ; RNA, Messenger - biosynthesis ; superoxide dismutase ; Superoxide Dismutase - biosynthesis ; Superoxide Dismutase - genetics ; TATA Box ; Transcription, Genetic</subject><ispartof>DNA and cell biology, 1994-11, Vol.13 (11), p.1127-1136</ispartof><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c325t-26f17340db99cee3e0eefed680bc7963a4e3be9acf5fa1adebea9d7a7aa3bf243</citedby><cites>FETCH-LOGICAL-c325t-26f17340db99cee3e0eefed680bc7963a4e3be9acf5fa1adebea9d7a7aa3bf243</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,3042,27924,27925</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/7702755$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Wan, X S</creatorcontrib><creatorcontrib>Devalaraja, M N</creatorcontrib><creatorcontrib>St Clair, D K</creatorcontrib><title>Molecular structure and organization of the human manganese superoxide dismutase gene</title><title>DNA and cell biology</title><addtitle>DNA Cell Biol</addtitle><description>Human manganese superoxide dismutase (MnSOD) is one of the major cellular defense enzymes that protects against toxic effects of superoxide radicals. Overexpression of human MnSOD has been shown to inhibit radiation-induced neoplastic transformation, suppress malignancy of cancer cells, and increase tolerance to various toxic agents. To elucidate the human MnSOD gene structure for identification of potential regulatory elements, we isolated five lambda clones from a normal human genomic DNA library and sequenced the largest clone containing the entire human MnSOD gene. The results demonstrated that human MnSOD is a single-copy gene consisting of five exons interrupted by four introns with typical splice junctions. A distinctive transcription initiation site was identified 74 bp upstream from the translation start site. This transcription initiation site is preceded by a G + C-rich (78%) promoter region containing a cluster of seven SP1 and three AP2 consensus sequences with no TATA box or CAAT box. The 3'-flanking region of the MnSOD gene contains one NF-kappa B consensus sequence. The presence of SP1, AP2, and NF-kappa B consensus sequences suggests that these potential regulatory elements may play a role in the regulation of human MnSOD gene expression.</description><subject>amino acid sequence prediction</subject><subject>Animals</subject><subject>Base Sequence</subject><subject>Cell Line</subject><subject>Consensus Sequence</subject><subject>DNA - chemistry</subject><subject>DNA Primers</subject><subject>Embryo, Mammalian</subject><subject>Exons</subject><subject>Fibroblasts</subject><subject>Genomic Library</subject><subject>Hominidae - genetics</subject><subject>Humans</subject><subject>Introns</subject><subject>Isoenzymes - biosynthesis</subject><subject>Isoenzymes - genetics</subject><subject>Lung</subject><subject>man</subject><subject>manganese</subject><subject>MnSOD gene</subject><subject>Molecular Sequence Data</subject><subject>nucleotide sequence</subject><subject>Promoter Regions, Genetic</subject><subject>Restriction Mapping</subject><subject>RNA, Messenger - analysis</subject><subject>RNA, Messenger - biosynthesis</subject><subject>superoxide dismutase</subject><subject>Superoxide Dismutase - biosynthesis</subject><subject>Superoxide Dismutase - genetics</subject><subject>TATA Box</subject><subject>Transcription, Genetic</subject><issn>1044-5498</issn><issn>1557-7430</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1994</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNo9kM1LAzEQxYMotVbvXoScvO2abLLN5ijFL6h4secwm8y2K_tRkw2of70pFg_DDDPvPYYfIdec5ZxV-s4NkHOtZc5FznmhTsicl6XKlBTsNM1MyqyUujonFyF8MMbKgrMZmSnFClWWc7J5HTu0sQNPw-SjnaJHCoOjo9_C0P7A1I4DHRs67ZDuYg8DTZVOGJCGuEc_frUOqWtDHydIyy0OeEnOGugCXh37gmweH95Xz9n67elldb_OrCjKKSuWDVdCMldrbREFMsQG3bJitVV6KUCiqFGDbcoGODisEbRToABE3RRSLMjtX-7ej58Rw2T6NljsuvTfGIPhS1XxSugkZH9C68cQPDZm79se_LfhzBxImkTSHEgaLsyBZLLcHLNj3aP7NxzRiV9GhnKY</recordid><startdate>19941101</startdate><enddate>19941101</enddate><creator>Wan, X S</creator><creator>Devalaraja, M N</creator><creator>St Clair, D K</creator><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7T3</scope><scope>7TM</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope></search><sort><creationdate>19941101</creationdate><title>Molecular structure and organization of the human manganese superoxide dismutase gene</title><author>Wan, X S ; Devalaraja, M N ; St Clair, D K</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c325t-26f17340db99cee3e0eefed680bc7963a4e3be9acf5fa1adebea9d7a7aa3bf243</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1994</creationdate><topic>amino acid sequence prediction</topic><topic>Animals</topic><topic>Base Sequence</topic><topic>Cell Line</topic><topic>Consensus Sequence</topic><topic>DNA - chemistry</topic><topic>DNA Primers</topic><topic>Embryo, Mammalian</topic><topic>Exons</topic><topic>Fibroblasts</topic><topic>Genomic Library</topic><topic>Hominidae - genetics</topic><topic>Humans</topic><topic>Introns</topic><topic>Isoenzymes - biosynthesis</topic><topic>Isoenzymes - genetics</topic><topic>Lung</topic><topic>man</topic><topic>manganese</topic><topic>MnSOD gene</topic><topic>Molecular Sequence Data</topic><topic>nucleotide sequence</topic><topic>Promoter Regions, Genetic</topic><topic>Restriction Mapping</topic><topic>RNA, Messenger - analysis</topic><topic>RNA, Messenger - biosynthesis</topic><topic>superoxide dismutase</topic><topic>Superoxide Dismutase - biosynthesis</topic><topic>Superoxide Dismutase - genetics</topic><topic>TATA Box</topic><topic>Transcription, Genetic</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Wan, X S</creatorcontrib><creatorcontrib>Devalaraja, M N</creatorcontrib><creatorcontrib>St Clair, D K</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Human Genome Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><jtitle>DNA and cell biology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Wan, X S</au><au>Devalaraja, M N</au><au>St Clair, D K</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Molecular structure and organization of the human manganese superoxide dismutase gene</atitle><jtitle>DNA and cell biology</jtitle><addtitle>DNA Cell Biol</addtitle><date>1994-11-01</date><risdate>1994</risdate><volume>13</volume><issue>11</issue><spage>1127</spage><epage>1136</epage><pages>1127-1136</pages><issn>1044-5498</issn><eissn>1557-7430</eissn><abstract>Human manganese superoxide dismutase (MnSOD) is one of the major cellular defense enzymes that protects against toxic effects of superoxide radicals. Overexpression of human MnSOD has been shown to inhibit radiation-induced neoplastic transformation, suppress malignancy of cancer cells, and increase tolerance to various toxic agents. To elucidate the human MnSOD gene structure for identification of potential regulatory elements, we isolated five lambda clones from a normal human genomic DNA library and sequenced the largest clone containing the entire human MnSOD gene. The results demonstrated that human MnSOD is a single-copy gene consisting of five exons interrupted by four introns with typical splice junctions. A distinctive transcription initiation site was identified 74 bp upstream from the translation start site. This transcription initiation site is preceded by a G + C-rich (78%) promoter region containing a cluster of seven SP1 and three AP2 consensus sequences with no TATA box or CAAT box. The 3'-flanking region of the MnSOD gene contains one NF-kappa B consensus sequence. The presence of SP1, AP2, and NF-kappa B consensus sequences suggests that these potential regulatory elements may play a role in the regulation of human MnSOD gene expression.</abstract><cop>United States</cop><pmid>7702755</pmid><doi>10.1089/dna.1994.13.1127</doi><tpages>10</tpages></addata></record> |
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subjects | amino acid sequence prediction Animals Base Sequence Cell Line Consensus Sequence DNA - chemistry DNA Primers Embryo, Mammalian Exons Fibroblasts Genomic Library Hominidae - genetics Humans Introns Isoenzymes - biosynthesis Isoenzymes - genetics Lung man manganese MnSOD gene Molecular Sequence Data nucleotide sequence Promoter Regions, Genetic Restriction Mapping RNA, Messenger - analysis RNA, Messenger - biosynthesis superoxide dismutase Superoxide Dismutase - biosynthesis Superoxide Dismutase - genetics TATA Box Transcription, Genetic |
title | Molecular structure and organization of the human manganese superoxide dismutase gene |
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