High throughput sequencing of small RNA component of leaves and inflorescence revealed conserved and novel miRNAs as well as phasiRNA loci in chickpea

•Identified 96 known miRNA homologs belonging to 38 miRNA families in chickpea.•Identified 20 novel miRNAs belonging to 17 miRNA families.•We also uncovered approximately 60 phasiRNA producing loci in chickpea.•Predicted targets for the miRNAs and some of the targets were confirmed using 5′ RACE ass...

Ausführliche Beschreibung

Gespeichert in:

Bibliographische Detailangaben
Veröffentlicht in:	Plant science (Limerick) 2015-06, Vol.235, p.46-57
Hauptverfasser:	Srivastava, Sangeeta, Zheng, Yun, Kudapa, Himabindu, Jagadeeswaran, Guru, Hivrale, Vandana, Varshney, Rajeev K., Sunkar, Ramanjulu
Format:	Artikel
Sprache:	eng
Schlagworte:	Base Sequence Chickpea Cicer - genetics Computational Biology Conserved Sequence F-Box Proteins - genetics Gene Expression Regulation, Plant Genes, Plant High-Throughput Nucleotide Sequencing - methods Inflorescence MicroRNAs Molecular Sequence Data Oxidoreductases - genetics PhasiRNAs Plant Leaves Plant Proteins - genetics Posttranscriptional gene regulation RNA, Plant RNA, Small Interfering Stress, Physiological - genetics Transcription Factors - genetics
Online-Zugang:	Volltext
Tags:	Tag hinzufügen Keine Tags, Fügen Sie den ersten Tag hinzu!

Schreiben Sie den ersten Kommentar!