Algal and Fungal Diversity in Antarctic Lichens

The composition of lichen ecosystems except mycobiont and photobiont has not been evaluated intensively. In addition, recent studies to identify algal genotypes have raised questions about the specific relationship between mycobiont and photobiont. In the current study, we analyzed algal and fungal...

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Veröffentlicht in:The Journal of eukaryotic microbiology 2015-03, Vol.62 (2), p.196-205
Hauptverfasser: Park, Chae Haeng, Kim, Kyung Mo, Elvebakk, Arve, Kim, Ok‐Sun, Jeong, Gajin, Hong, Soon Gyu
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container_issue 2
container_start_page 196
container_title The Journal of eukaryotic microbiology
container_volume 62
creator Park, Chae Haeng
Kim, Kyung Mo
Elvebakk, Arve
Kim, Ok‐Sun
Jeong, Gajin
Hong, Soon Gyu
description The composition of lichen ecosystems except mycobiont and photobiont has not been evaluated intensively. In addition, recent studies to identify algal genotypes have raised questions about the specific relationship between mycobiont and photobiont. In the current study, we analyzed algal and fungal community structures in lichen species from King George Island, Antarctica, by pyrosequencing of eukaryotic large subunit (LSU) and algal internal transcribed spacer (ITS) domains of the nuclear rRNA gene. The sequencing results of LSU and ITS regions indicated that each lichen thallus contained diverse algal species. The major algal operational taxonomic unit (OTU) defined at a 99% similarity cutoff of LSU sequences accounted for 78.7–100% of the total algal community in each sample. In several cases, the major OTUs defined by LSU sequences were represented by two closely related OTUs defined by 98% sequence similarity of ITS domain. The results of LSU sequences indicated that lichen‐associated fungi belonged to the Arthoniomycetes, Eurotiomycetes, Lecanoromycetes, Leotiomycetes, and Sordariomycetes of the Ascomycota, and Tremellomycetes and Cystobasidiomycetes of the Basidiomycota. The composition of major photobiont species and lichen‐associated fungal community were mostly related to the mycobiont species. The contribution of growth forms or substrates on composition of photobiont and lichen‐associated fungi was not evident.
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In addition, recent studies to identify algal genotypes have raised questions about the specific relationship between mycobiont and photobiont. In the current study, we analyzed algal and fungal community structures in lichen species from King George Island, Antarctica, by pyrosequencing of eukaryotic large subunit (LSU) and algal internal transcribed spacer (ITS) domains of the nuclear rRNA gene. The sequencing results of LSU and ITS regions indicated that each lichen thallus contained diverse algal species. The major algal operational taxonomic unit (OTU) defined at a 99% similarity cutoff of LSU sequences accounted for 78.7–100% of the total algal community in each sample. In several cases, the major OTUs defined by LSU sequences were represented by two closely related OTUs defined by 98% sequence similarity of ITS domain. The results of LSU sequences indicated that lichen‐associated fungi belonged to the Arthoniomycetes, Eurotiomycetes, Lecanoromycetes, Leotiomycetes, and Sordariomycetes of the Ascomycota, and Tremellomycetes and Cystobasidiomycetes of the Basidiomycota. The composition of major photobiont species and lichen‐associated fungal community were mostly related to the mycobiont species. 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source MEDLINE; Wiley Online Library Journals Frontfile Complete
subjects Antarctic Regions
Arthoniomycetes
Ascomycota
Biodiversity
Chlorophyta - classification
Cladonia
community structure
Cystobasidiomycetes
Ecosystem
ecosystems
Eurotiomycetes
fungal communities
fungi
Fungi - classification
genes
Genes, rRNA
Genotype
internal transcribed spacers
Lecanoromycetes
Leotiomycetes
lichen-associated fungi
lichens
Lichens - classification
Lichens - genetics
microalgae
Phylogeny
ribosomal RNA
Sequence Analysis, DNA
sequence homology
Sordariomycetes
thallus
Tremellomycetes
Umbilicaria
Usnea
title Algal and Fungal Diversity in Antarctic Lichens
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