The OCT4 pseudogene POU5F1B is amplified and promotes an aggressive phenotype in gastric cancer
POU5F1B (POU domain class 5 transcription factor 1B), a processed pseudogene that is highly homologous to OCT4 , was recently shown to be transcribed in cancer cells, but its clinical relevance and biological function have remained unclear. We now show that POU5F1B , which is located adjacent to MYC...
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Veröffentlicht in: | Oncogene 2015-01, Vol.34 (2), p.199-208 |
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creator | Hayashi, H Arao, T Togashi, Y Kato, H Fujita, Y De Velasco, M A Kimura, H Matsumoto, K Tanaka, K Okamoto, I Ito, A Yamada, Y Nakagawa, K Nishio, K |
description | POU5F1B
(POU domain class 5 transcription factor 1B), a processed pseudogene that is highly homologous to
OCT4
, was recently shown to be transcribed in cancer cells, but its clinical relevance and biological function have remained unclear. We now show that
POU5F1B
, which is located adjacent to
MYC
on human chromosome 8q24, is frequently amplified in gastric cancer (GC) cell lines.
POU5F1B
, but not
OCT4
, was also found to be expressed at a high level in GC cell lines and clinical specimens. In addition, the DNA copy number and mRNA abundance for
POU5F1B
showed a positive correlation in both cancer cell lines and GC specimens. Overexpression of
POU5F1B
in GC cells promoted colony formation
in vitro
as well as both tumorigenicity and tumor growth
in vivo
, and these effects were enhanced in the additional presence of
MYC
overexpression. Furthermore, knockdown of
POU5F1B
expression with a short hairpin RNA confirmed a role for the endogenous pseudogene in the promotion of cancer cell growth
in vitro
and tumor growth
in vivo
.
POU5F1B
overexpression induced upregulation of various growth factors in GC cells as well as exhibited mitogenic, angiogenic and antiapoptotic effects in GC xenografts. Finally, amplification of
POU5F1B
was detected in 17 (12%) of 145 cases of GC and was a significant predictor of poor prognosis in patients with stage IV disease. In conclusion, we found that the
POU5F1B
pseudogene is amplified and expressed at a high level in, as well as confers an aggressive phenotype on, GC, and that
POU5F1B
amplification is associated with a poor prognosis in GC patients. |
doi_str_mv | 10.1038/onc.2013.547 |
format | Article |
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(POU domain class 5 transcription factor 1B), a processed pseudogene that is highly homologous to
OCT4
, was recently shown to be transcribed in cancer cells, but its clinical relevance and biological function have remained unclear. We now show that
POU5F1B
, which is located adjacent to
MYC
on human chromosome 8q24, is frequently amplified in gastric cancer (GC) cell lines.
POU5F1B
, but not
OCT4
, was also found to be expressed at a high level in GC cell lines and clinical specimens. In addition, the DNA copy number and mRNA abundance for
POU5F1B
showed a positive correlation in both cancer cell lines and GC specimens. Overexpression of
POU5F1B
in GC cells promoted colony formation
in vitro
as well as both tumorigenicity and tumor growth
in vivo
, and these effects were enhanced in the additional presence of
MYC
overexpression. Furthermore, knockdown of
POU5F1B
expression with a short hairpin RNA confirmed a role for the endogenous pseudogene in the promotion of cancer cell growth
in vitro
and tumor growth
in vivo
.
POU5F1B
overexpression induced upregulation of various growth factors in GC cells as well as exhibited mitogenic, angiogenic and antiapoptotic effects in GC xenografts. Finally, amplification of
POU5F1B
was detected in 17 (12%) of 145 cases of GC and was a significant predictor of poor prognosis in patients with stage IV disease. In conclusion, we found that the
POU5F1B
pseudogene is amplified and expressed at a high level in, as well as confers an aggressive phenotype on, GC, and that
POU5F1B
amplification is associated with a poor prognosis in GC patients.</description><identifier>ISSN: 0950-9232</identifier><identifier>EISSN: 1476-5594</identifier><identifier>DOI: 10.1038/onc.2013.547</identifier><identifier>PMID: 24362523</identifier><identifier>CODEN: ONCNES</identifier><language>eng</language><publisher>London: Nature Publishing Group UK</publisher><subject>631/67/1504/1829 ; 692/420/755 ; Analysis ; Angiogenesis ; Animals ; Apoptosis ; Cancer ; Care and treatment ; Cell Biology ; Cell Proliferation - genetics ; Cells ; Chromosome 8 ; Copy number ; Diagnosis ; Female ; Gastric cancer ; Gastrointestinal diseases ; Gene Amplification ; Gene Dosage ; Genetic aspects ; Genotype & phenotype ; Growth factors ; HEK293 Cells ; Heterografts ; Human Genetics ; Humans ; Internal Medicine ; Medicine ; Medicine & Public Health ; Mice ; Mice, Inbred BALB C ; Mice, Nude ; Myc protein ; Oct-4 protein ; Octamer Transcription Factor-3 - biosynthesis ; Octamer Transcription Factor-3 - genetics ; Oncology ; original-article ; Phenotype ; Phenotypes ; Prognosis ; Pseudogenes ; RNA, Messenger - genetics ; RNA, Messenger - metabolism ; Stomach cancer ; Stomach Neoplasms - genetics ; Stomach Neoplasms - metabolism ; Stomach Neoplasms - pathology ; Tumor cell lines ; Tumorigenicity ; Xenografts</subject><ispartof>Oncogene, 2015-01, Vol.34 (2), p.199-208</ispartof><rights>Macmillan Publishers Limited 2015</rights><rights>COPYRIGHT 2015 Nature Publishing Group</rights><rights>Copyright Nature Publishing Group Jan 8, 2015</rights><rights>Copyright Nature Publishing Group Jan 2015</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c621t-69bd73bc4674a9b1401e51b4605c2eb424435f320380c51740baf82b35f9de9e3</citedby><cites>FETCH-LOGICAL-c621t-69bd73bc4674a9b1401e51b4605c2eb424435f320380c51740baf82b35f9de9e3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>315,781,785,27929,27930</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/24362523$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Hayashi, H</creatorcontrib><creatorcontrib>Arao, T</creatorcontrib><creatorcontrib>Togashi, Y</creatorcontrib><creatorcontrib>Kato, H</creatorcontrib><creatorcontrib>Fujita, Y</creatorcontrib><creatorcontrib>De Velasco, M A</creatorcontrib><creatorcontrib>Kimura, H</creatorcontrib><creatorcontrib>Matsumoto, K</creatorcontrib><creatorcontrib>Tanaka, K</creatorcontrib><creatorcontrib>Okamoto, I</creatorcontrib><creatorcontrib>Ito, A</creatorcontrib><creatorcontrib>Yamada, Y</creatorcontrib><creatorcontrib>Nakagawa, K</creatorcontrib><creatorcontrib>Nishio, K</creatorcontrib><title>The OCT4 pseudogene POU5F1B is amplified and promotes an aggressive phenotype in gastric cancer</title><title>Oncogene</title><addtitle>Oncogene</addtitle><addtitle>Oncogene</addtitle><description>POU5F1B
(POU domain class 5 transcription factor 1B), a processed pseudogene that is highly homologous to
OCT4
, was recently shown to be transcribed in cancer cells, but its clinical relevance and biological function have remained unclear. We now show that
POU5F1B
, which is located adjacent to
MYC
on human chromosome 8q24, is frequently amplified in gastric cancer (GC) cell lines.
POU5F1B
, but not
OCT4
, was also found to be expressed at a high level in GC cell lines and clinical specimens. In addition, the DNA copy number and mRNA abundance for
POU5F1B
showed a positive correlation in both cancer cell lines and GC specimens. Overexpression of
POU5F1B
in GC cells promoted colony formation
in vitro
as well as both tumorigenicity and tumor growth
in vivo
, and these effects were enhanced in the additional presence of
MYC
overexpression. Furthermore, knockdown of
POU5F1B
expression with a short hairpin RNA confirmed a role for the endogenous pseudogene in the promotion of cancer cell growth
in vitro
and tumor growth
in vivo
.
POU5F1B
overexpression induced upregulation of various growth factors in GC cells as well as exhibited mitogenic, angiogenic and antiapoptotic effects in GC xenografts. Finally, amplification of
POU5F1B
was detected in 17 (12%) of 145 cases of GC and was a significant predictor of poor prognosis in patients with stage IV disease. In conclusion, we found that the
POU5F1B
pseudogene is amplified and expressed at a high level in, as well as confers an aggressive phenotype on, GC, and that
POU5F1B
amplification is associated with a poor prognosis in GC patients.</description><subject>631/67/1504/1829</subject><subject>692/420/755</subject><subject>Analysis</subject><subject>Angiogenesis</subject><subject>Animals</subject><subject>Apoptosis</subject><subject>Cancer</subject><subject>Care and treatment</subject><subject>Cell Biology</subject><subject>Cell Proliferation - genetics</subject><subject>Cells</subject><subject>Chromosome 8</subject><subject>Copy number</subject><subject>Diagnosis</subject><subject>Female</subject><subject>Gastric cancer</subject><subject>Gastrointestinal diseases</subject><subject>Gene Amplification</subject><subject>Gene Dosage</subject><subject>Genetic aspects</subject><subject>Genotype & phenotype</subject><subject>Growth factors</subject><subject>HEK293 Cells</subject><subject>Heterografts</subject><subject>Human Genetics</subject><subject>Humans</subject><subject>Internal Medicine</subject><subject>Medicine</subject><subject>Medicine & Public Health</subject><subject>Mice</subject><subject>Mice, Inbred BALB C</subject><subject>Mice, Nude</subject><subject>Myc protein</subject><subject>Oct-4 protein</subject><subject>Octamer Transcription Factor-3 - biosynthesis</subject><subject>Octamer Transcription Factor-3 - genetics</subject><subject>Oncology</subject><subject>original-article</subject><subject>Phenotype</subject><subject>Phenotypes</subject><subject>Prognosis</subject><subject>Pseudogenes</subject><subject>RNA, Messenger - genetics</subject><subject>RNA, Messenger - metabolism</subject><subject>Stomach cancer</subject><subject>Stomach Neoplasms - genetics</subject><subject>Stomach Neoplasms - metabolism</subject><subject>Stomach Neoplasms - pathology</subject><subject>Tumor cell lines</subject><subject>Tumorigenicity</subject><subject>Xenografts</subject><issn>0950-9232</issn><issn>1476-5594</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>8G5</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><sourceid>GUQSH</sourceid><sourceid>M2O</sourceid><recordid>eNp9kc1v1DAQxS0EokvhxhlZ4sKBLP5OfCwrCkiVlsP2bDnOJHWV2MFOkPrf42VLBajCPlh6_s3MGz2EXlOypYQ3H2JwW0Yo30pRP0EbKmpVSanFU7QhWpJKM87O0IucbwkhtSbsOTpjgismGd8gc7gBvN8dBJ4zrF0cIAD-tr-Wl_Qj9hnbaR5976HDNnR4TnGKCxQ5YDsMCXL2PwDPNxDicjcD9gEPNi_JO-xscJBeome9HTO8un_P0fXlp8PuS3W1__x1d3FVOcXoUinddjVvnVC1sLqlglCQtBWKSMegFUwILnvOysLESVoL0tq-YW0RdQca-Dl6d-pbLH5fIS9m8tnBONoAcc2GKiUYabhuCvr2H_Q2rikUd4ZxThWvlaT_o6gSnErCy3mgBjuC8aGPS7LuONpccF3LhrBfE7ePUOV2MHkXA_S-6H8VvD8VuBRzTtCbOfnJpjtDiTmmbkrq5pi6KakX_M2917WdoHuAf8dcgOoE5PIVBkh_LPNYw5_wsbH4</recordid><startdate>20150108</startdate><enddate>20150108</enddate><creator>Hayashi, H</creator><creator>Arao, T</creator><creator>Togashi, Y</creator><creator>Kato, H</creator><creator>Fujita, Y</creator><creator>De Velasco, M A</creator><creator>Kimura, H</creator><creator>Matsumoto, K</creator><creator>Tanaka, K</creator><creator>Okamoto, I</creator><creator>Ito, A</creator><creator>Yamada, Y</creator><creator>Nakagawa, K</creator><creator>Nishio, K</creator><general>Nature Publishing Group UK</general><general>Nature Publishing Group</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7TM</scope><scope>7TO</scope><scope>7U9</scope><scope>7X7</scope><scope>7XB</scope><scope>88A</scope><scope>88E</scope><scope>8AO</scope><scope>8C1</scope><scope>8FD</scope><scope>8FE</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>8G5</scope><scope>ABUWG</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BHPHI</scope><scope>CCPQU</scope><scope>DWQXO</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>GUQSH</scope><scope>H94</scope><scope>HCIFZ</scope><scope>K9.</scope><scope>LK8</scope><scope>M0S</scope><scope>M1P</scope><scope>M2O</scope><scope>M7P</scope><scope>MBDVC</scope><scope>P64</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>PRINS</scope><scope>Q9U</scope><scope>RC3</scope></search><sort><creationdate>20150108</creationdate><title>The OCT4 pseudogene POU5F1B is amplified and promotes an aggressive phenotype in gastric cancer</title><author>Hayashi, H ; Arao, T ; Togashi, Y ; Kato, H ; Fujita, Y ; De Velasco, M A ; Kimura, H ; Matsumoto, K ; Tanaka, K ; Okamoto, I ; Ito, A ; Yamada, Y ; Nakagawa, K ; Nishio, K</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c621t-69bd73bc4674a9b1401e51b4605c2eb424435f320380c51740baf82b35f9de9e3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>631/67/1504/1829</topic><topic>692/420/755</topic><topic>Analysis</topic><topic>Angiogenesis</topic><topic>Animals</topic><topic>Apoptosis</topic><topic>Cancer</topic><topic>Care and treatment</topic><topic>Cell Biology</topic><topic>Cell Proliferation - genetics</topic><topic>Cells</topic><topic>Chromosome 8</topic><topic>Copy number</topic><topic>Diagnosis</topic><topic>Female</topic><topic>Gastric cancer</topic><topic>Gastrointestinal diseases</topic><topic>Gene Amplification</topic><topic>Gene Dosage</topic><topic>Genetic aspects</topic><topic>Genotype & phenotype</topic><topic>Growth factors</topic><topic>HEK293 Cells</topic><topic>Heterografts</topic><topic>Human Genetics</topic><topic>Humans</topic><topic>Internal Medicine</topic><topic>Medicine</topic><topic>Medicine & Public Health</topic><topic>Mice</topic><topic>Mice, Inbred BALB C</topic><topic>Mice, Nude</topic><topic>Myc protein</topic><topic>Oct-4 protein</topic><topic>Octamer Transcription Factor-3 - biosynthesis</topic><topic>Octamer Transcription Factor-3 - genetics</topic><topic>Oncology</topic><topic>original-article</topic><topic>Phenotype</topic><topic>Phenotypes</topic><topic>Prognosis</topic><topic>Pseudogenes</topic><topic>RNA, Messenger - genetics</topic><topic>RNA, Messenger - metabolism</topic><topic>Stomach cancer</topic><topic>Stomach Neoplasms - genetics</topic><topic>Stomach Neoplasms - metabolism</topic><topic>Stomach Neoplasms - pathology</topic><topic>Tumor cell lines</topic><topic>Tumorigenicity</topic><topic>Xenografts</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Hayashi, H</creatorcontrib><creatorcontrib>Arao, T</creatorcontrib><creatorcontrib>Togashi, Y</creatorcontrib><creatorcontrib>Kato, H</creatorcontrib><creatorcontrib>Fujita, Y</creatorcontrib><creatorcontrib>De Velasco, M A</creatorcontrib><creatorcontrib>Kimura, H</creatorcontrib><creatorcontrib>Matsumoto, K</creatorcontrib><creatorcontrib>Tanaka, K</creatorcontrib><creatorcontrib>Okamoto, I</creatorcontrib><creatorcontrib>Ito, A</creatorcontrib><creatorcontrib>Yamada, Y</creatorcontrib><creatorcontrib>Nakagawa, K</creatorcontrib><creatorcontrib>Nishio, K</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Nucleic Acids Abstracts</collection><collection>Oncogenes and Growth Factors Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Biology Database (Alumni Edition)</collection><collection>Medical Database (Alumni Edition)</collection><collection>ProQuest Pharma Collection</collection><collection>Public Health Database</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Research Library (Alumni Edition)</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Natural Science Collection</collection><collection>ProQuest One Community College</collection><collection>ProQuest Central Korea</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>Research Library Prep</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>SciTech Premium Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>ProQuest Biological Science Collection</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Research Library</collection><collection>Biological Science Database</collection><collection>Research Library (Corporate)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>ProQuest Central China</collection><collection>ProQuest Central Basic</collection><collection>Genetics Abstracts</collection><jtitle>Oncogene</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Hayashi, H</au><au>Arao, T</au><au>Togashi, Y</au><au>Kato, H</au><au>Fujita, Y</au><au>De Velasco, M A</au><au>Kimura, H</au><au>Matsumoto, K</au><au>Tanaka, K</au><au>Okamoto, I</au><au>Ito, A</au><au>Yamada, Y</au><au>Nakagawa, K</au><au>Nishio, K</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The OCT4 pseudogene POU5F1B is amplified and promotes an aggressive phenotype in gastric cancer</atitle><jtitle>Oncogene</jtitle><stitle>Oncogene</stitle><addtitle>Oncogene</addtitle><date>2015-01-08</date><risdate>2015</risdate><volume>34</volume><issue>2</issue><spage>199</spage><epage>208</epage><pages>199-208</pages><issn>0950-9232</issn><eissn>1476-5594</eissn><coden>ONCNES</coden><abstract>POU5F1B
(POU domain class 5 transcription factor 1B), a processed pseudogene that is highly homologous to
OCT4
, was recently shown to be transcribed in cancer cells, but its clinical relevance and biological function have remained unclear. We now show that
POU5F1B
, which is located adjacent to
MYC
on human chromosome 8q24, is frequently amplified in gastric cancer (GC) cell lines.
POU5F1B
, but not
OCT4
, was also found to be expressed at a high level in GC cell lines and clinical specimens. In addition, the DNA copy number and mRNA abundance for
POU5F1B
showed a positive correlation in both cancer cell lines and GC specimens. Overexpression of
POU5F1B
in GC cells promoted colony formation
in vitro
as well as both tumorigenicity and tumor growth
in vivo
, and these effects were enhanced in the additional presence of
MYC
overexpression. Furthermore, knockdown of
POU5F1B
expression with a short hairpin RNA confirmed a role for the endogenous pseudogene in the promotion of cancer cell growth
in vitro
and tumor growth
in vivo
.
POU5F1B
overexpression induced upregulation of various growth factors in GC cells as well as exhibited mitogenic, angiogenic and antiapoptotic effects in GC xenografts. Finally, amplification of
POU5F1B
was detected in 17 (12%) of 145 cases of GC and was a significant predictor of poor prognosis in patients with stage IV disease. In conclusion, we found that the
POU5F1B
pseudogene is amplified and expressed at a high level in, as well as confers an aggressive phenotype on, GC, and that
POU5F1B
amplification is associated with a poor prognosis in GC patients.</abstract><cop>London</cop><pub>Nature Publishing Group UK</pub><pmid>24362523</pmid><doi>10.1038/onc.2013.547</doi><tpages>10</tpages></addata></record> |
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subjects | 631/67/1504/1829 692/420/755 Analysis Angiogenesis Animals Apoptosis Cancer Care and treatment Cell Biology Cell Proliferation - genetics Cells Chromosome 8 Copy number Diagnosis Female Gastric cancer Gastrointestinal diseases Gene Amplification Gene Dosage Genetic aspects Genotype & phenotype Growth factors HEK293 Cells Heterografts Human Genetics Humans Internal Medicine Medicine Medicine & Public Health Mice Mice, Inbred BALB C Mice, Nude Myc protein Oct-4 protein Octamer Transcription Factor-3 - biosynthesis Octamer Transcription Factor-3 - genetics Oncology original-article Phenotype Phenotypes Prognosis Pseudogenes RNA, Messenger - genetics RNA, Messenger - metabolism Stomach cancer Stomach Neoplasms - genetics Stomach Neoplasms - metabolism Stomach Neoplasms - pathology Tumor cell lines Tumorigenicity Xenografts |
title | The OCT4 pseudogene POU5F1B is amplified and promotes an aggressive phenotype in gastric cancer |
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