Autophagy in zebrafish

From a hitherto underappreciated phenomenon, autophagy has become one of the most intensively studied cellular processes in recent years. Its role in cellular homeostasis, development and disease is supported by a fast growing body of evidence. Surprisingly, only a small fraction of new observations...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Methods (San Diego, Calif.) Calif.), 2015-03, Vol.75, p.172-180
Hauptverfasser: Varga, Máté, Fodor, Erika, Vellai, Tibor
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 180
container_issue
container_start_page 172
container_title Methods (San Diego, Calif.)
container_volume 75
creator Varga, Máté
Fodor, Erika
Vellai, Tibor
description From a hitherto underappreciated phenomenon, autophagy has become one of the most intensively studied cellular processes in recent years. Its role in cellular homeostasis, development and disease is supported by a fast growing body of evidence. Surprisingly, only a small fraction of new observations regarding the physiological functions of cellular “self-digestion” comes from zebrafish, one of the most popular vertebrate model organisms. Here we review the existing information about autophagy reporter lines, genetic knock-down assays and small molecular reagents that have been tested in this system. As we argue, some of these tools have to be used carefully due to possible pleiotropic effects. However, when applied rigorously, in combination with novel mutant strains and genome editing techniques, they could also transform zebrafish into an important animal model of autophagy research.
doi_str_mv 10.1016/j.ymeth.2014.12.004
format Article
fullrecord <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_1661991514</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><els_id>S1046202314003971</els_id><sourcerecordid>1661991514</sourcerecordid><originalsourceid>FETCH-LOGICAL-c359t-25776085d6f22bbac3eef4d0eba758458a3867cacf7b1f7b0190357a6aa730903</originalsourceid><addsrcrecordid>eNp9kL1PwzAQxS0EoqWwsiChjiwJd3ZsJwNDVfElVWKB2XKcC3XVNsVOkMpfT0oLI8Pp3vDePd2PsSuEFAHV7SLdrqidpxwwS5GnANkRGyIUMilQwPFOZyrhwMWAncW4AADkOj9lAy6zIgdQQ3Y56dpmM7fv27Ffj7-oDLb2cX7OTmq7jHRx2CP29nD_On1KZi-Pz9PJLHFCFm3CpdYKclmpmvOytE4Q1VkFVFot80zmVuRKO-tqXWI_gAUIqa2yVgvo9Yjd7O9uQvPRUWzNykdHy6VdU9NFg0phUaDErLeKvdWFJsZAtdkEv7JhaxDMDohZmB8gZgfEIDc9kD51fSjoyhVVf5lfAr3hbm-g_s1PT8FE52ntqPKBXGuqxv9b8A1e6XBZ</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1661991514</pqid></control><display><type>article</type><title>Autophagy in zebrafish</title><source>MEDLINE</source><source>ScienceDirect Journals (5 years ago - present)</source><creator>Varga, Máté ; Fodor, Erika ; Vellai, Tibor</creator><creatorcontrib>Varga, Máté ; Fodor, Erika ; Vellai, Tibor</creatorcontrib><description>From a hitherto underappreciated phenomenon, autophagy has become one of the most intensively studied cellular processes in recent years. Its role in cellular homeostasis, development and disease is supported by a fast growing body of evidence. Surprisingly, only a small fraction of new observations regarding the physiological functions of cellular “self-digestion” comes from zebrafish, one of the most popular vertebrate model organisms. Here we review the existing information about autophagy reporter lines, genetic knock-down assays and small molecular reagents that have been tested in this system. As we argue, some of these tools have to be used carefully due to possible pleiotropic effects. However, when applied rigorously, in combination with novel mutant strains and genome editing techniques, they could also transform zebrafish into an important animal model of autophagy research.</description><identifier>ISSN: 1046-2023</identifier><identifier>EISSN: 1095-9130</identifier><identifier>DOI: 10.1016/j.ymeth.2014.12.004</identifier><identifier>PMID: 25498006</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Animals ; Autophagy ; Autophagy - genetics ; Biological Assay - methods ; Disease Models, Animal ; Genome ; Morpholinos ; Regeneration ; Reporter lines ; Small molecules ; Zebrafish</subject><ispartof>Methods (San Diego, Calif.), 2015-03, Vol.75, p.172-180</ispartof><rights>2014 Elsevier Inc.</rights><rights>Copyright © 2014 Elsevier Inc. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c359t-25776085d6f22bbac3eef4d0eba758458a3867cacf7b1f7b0190357a6aa730903</citedby><cites>FETCH-LOGICAL-c359t-25776085d6f22bbac3eef4d0eba758458a3867cacf7b1f7b0190357a6aa730903</cites><orcidid>0000-0002-4207-7618</orcidid></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.ymeth.2014.12.004$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,780,784,3550,27924,27925,45995</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/25498006$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Varga, Máté</creatorcontrib><creatorcontrib>Fodor, Erika</creatorcontrib><creatorcontrib>Vellai, Tibor</creatorcontrib><title>Autophagy in zebrafish</title><title>Methods (San Diego, Calif.)</title><addtitle>Methods</addtitle><description>From a hitherto underappreciated phenomenon, autophagy has become one of the most intensively studied cellular processes in recent years. Its role in cellular homeostasis, development and disease is supported by a fast growing body of evidence. Surprisingly, only a small fraction of new observations regarding the physiological functions of cellular “self-digestion” comes from zebrafish, one of the most popular vertebrate model organisms. Here we review the existing information about autophagy reporter lines, genetic knock-down assays and small molecular reagents that have been tested in this system. As we argue, some of these tools have to be used carefully due to possible pleiotropic effects. However, when applied rigorously, in combination with novel mutant strains and genome editing techniques, they could also transform zebrafish into an important animal model of autophagy research.</description><subject>Animals</subject><subject>Autophagy</subject><subject>Autophagy - genetics</subject><subject>Biological Assay - methods</subject><subject>Disease Models, Animal</subject><subject>Genome</subject><subject>Morpholinos</subject><subject>Regeneration</subject><subject>Reporter lines</subject><subject>Small molecules</subject><subject>Zebrafish</subject><issn>1046-2023</issn><issn>1095-9130</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNp9kL1PwzAQxS0EoqWwsiChjiwJd3ZsJwNDVfElVWKB2XKcC3XVNsVOkMpfT0oLI8Pp3vDePd2PsSuEFAHV7SLdrqidpxwwS5GnANkRGyIUMilQwPFOZyrhwMWAncW4AADkOj9lAy6zIgdQQ3Y56dpmM7fv27Ffj7-oDLb2cX7OTmq7jHRx2CP29nD_On1KZi-Pz9PJLHFCFm3CpdYKclmpmvOytE4Q1VkFVFot80zmVuRKO-tqXWI_gAUIqa2yVgvo9Yjd7O9uQvPRUWzNykdHy6VdU9NFg0phUaDErLeKvdWFJsZAtdkEv7JhaxDMDohZmB8gZgfEIDc9kD51fSjoyhVVf5lfAr3hbm-g_s1PT8FE52ntqPKBXGuqxv9b8A1e6XBZ</recordid><startdate>20150315</startdate><enddate>20150315</enddate><creator>Varga, Máté</creator><creator>Fodor, Erika</creator><creator>Vellai, Tibor</creator><general>Elsevier Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><orcidid>https://orcid.org/0000-0002-4207-7618</orcidid></search><sort><creationdate>20150315</creationdate><title>Autophagy in zebrafish</title><author>Varga, Máté ; Fodor, Erika ; Vellai, Tibor</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c359t-25776085d6f22bbac3eef4d0eba758458a3867cacf7b1f7b0190357a6aa730903</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>Animals</topic><topic>Autophagy</topic><topic>Autophagy - genetics</topic><topic>Biological Assay - methods</topic><topic>Disease Models, Animal</topic><topic>Genome</topic><topic>Morpholinos</topic><topic>Regeneration</topic><topic>Reporter lines</topic><topic>Small molecules</topic><topic>Zebrafish</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Varga, Máté</creatorcontrib><creatorcontrib>Fodor, Erika</creatorcontrib><creatorcontrib>Vellai, Tibor</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Methods (San Diego, Calif.)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Varga, Máté</au><au>Fodor, Erika</au><au>Vellai, Tibor</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Autophagy in zebrafish</atitle><jtitle>Methods (San Diego, Calif.)</jtitle><addtitle>Methods</addtitle><date>2015-03-15</date><risdate>2015</risdate><volume>75</volume><spage>172</spage><epage>180</epage><pages>172-180</pages><issn>1046-2023</issn><eissn>1095-9130</eissn><abstract>From a hitherto underappreciated phenomenon, autophagy has become one of the most intensively studied cellular processes in recent years. Its role in cellular homeostasis, development and disease is supported by a fast growing body of evidence. Surprisingly, only a small fraction of new observations regarding the physiological functions of cellular “self-digestion” comes from zebrafish, one of the most popular vertebrate model organisms. Here we review the existing information about autophagy reporter lines, genetic knock-down assays and small molecular reagents that have been tested in this system. As we argue, some of these tools have to be used carefully due to possible pleiotropic effects. However, when applied rigorously, in combination with novel mutant strains and genome editing techniques, they could also transform zebrafish into an important animal model of autophagy research.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>25498006</pmid><doi>10.1016/j.ymeth.2014.12.004</doi><tpages>9</tpages><orcidid>https://orcid.org/0000-0002-4207-7618</orcidid></addata></record>
fulltext fulltext
identifier ISSN: 1046-2023
ispartof Methods (San Diego, Calif.), 2015-03, Vol.75, p.172-180
issn 1046-2023
1095-9130
language eng
recordid cdi_proquest_miscellaneous_1661991514
source MEDLINE; ScienceDirect Journals (5 years ago - present)
subjects Animals
Autophagy
Autophagy - genetics
Biological Assay - methods
Disease Models, Animal
Genome
Morpholinos
Regeneration
Reporter lines
Small molecules
Zebrafish
title Autophagy in zebrafish
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-07T23%3A00%3A54IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Autophagy%20in%20zebrafish&rft.jtitle=Methods%20(San%20Diego,%20Calif.)&rft.au=Varga,%20M%C3%A1t%C3%A9&rft.date=2015-03-15&rft.volume=75&rft.spage=172&rft.epage=180&rft.pages=172-180&rft.issn=1046-2023&rft.eissn=1095-9130&rft_id=info:doi/10.1016/j.ymeth.2014.12.004&rft_dat=%3Cproquest_cross%3E1661991514%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=1661991514&rft_id=info:pmid/25498006&rft_els_id=S1046202314003971&rfr_iscdi=true