Pythium insidiosum Keratitis: Clinical Profile and Role of DNA Sequencing and Zoospore Formation in Diagnosis

PURPOSE:To report the molecular and microbiological diagnosis and clinical profile of 13 patients with Pythium insidiosum keratitis. METHODS:Phase 1 of the study consisted of DNA sequencing of the ITS region of the rDNA of 162 stocked morphologically unidentified nonconsecutive fungal isolates from...

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Veröffentlicht in:Cornea 2015-04, Vol.34 (4), p.438-442
Hauptverfasser: Sharma, Savitri, Balne, Praveen K, Motukupally, Swapna R, Das, Sujata, Garg, Prashant, Sahu, Srikant K, Arunasri, Kotakonda, Manjulatha, Kodiganti, Mishra, Dilip K, Shivaji, Sisinthy
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container_end_page 442
container_issue 4
container_start_page 438
container_title Cornea
container_volume 34
creator Sharma, Savitri
Balne, Praveen K
Motukupally, Swapna R
Das, Sujata
Garg, Prashant
Sahu, Srikant K
Arunasri, Kotakonda
Manjulatha, Kodiganti
Mishra, Dilip K
Shivaji, Sisinthy
description PURPOSE:To report the molecular and microbiological diagnosis and clinical profile of 13 patients with Pythium insidiosum keratitis. METHODS:Phase 1 of the study consisted of DNA sequencing of the ITS region of the rDNA of 162 stocked morphologically unidentified nonconsecutive fungal isolates from corneal scraping of patients with keratitis (2010–2012). Blast and phylogenetic analyses of the sequences showed 9 to be P. insidiosum. A retrospective review of archived photographs of colony and direct microscopy of corneal scrapings and clinical records of the cases were performed. Phase 2 began in 2014, in which a simple method of zoospore formation was used for fungal colonies resembling those of P. insidiosum followed by DNA sequencing. RESULTS:The prevalence of P. insidiosum among unidentified fungal isolates from keratitis was 9/162 (5.5%) in phase 1. In phase 2, 4/102 cases (3.9%) of fungal keratitis were identified as P. insidiosum (January–February, 2014). Phylogenetic analysis of all 13 fungal isolates confirmed the identification of P. insidiosum. Corneal infiltrates exhibited hyphate edges, tentacle-like extensions, and dot-like infiltrates surrounding the main infiltrate. Response to topical 5% natamycin eye drops with or without oral antifungals was poor (penetrating keratoplasty9 and evisceration2) with a mean follow-up period of 82 days. CONCLUSIONS:P. insidiosum keratitis needs to be considered in the differential diagnosis of severe fungal keratitis. It can be identified using the zoospore formation method and confirmed by ITS DNA sequencing. Lack of response to currently used antifungal drugs calls for evaluation of newer drugs for medical therapy and consideration for early penetrating keratoplasty.
doi_str_mv 10.1097/ICO.0000000000000349
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METHODS:Phase 1 of the study consisted of DNA sequencing of the ITS region of the rDNA of 162 stocked morphologically unidentified nonconsecutive fungal isolates from corneal scraping of patients with keratitis (2010–2012). Blast and phylogenetic analyses of the sequences showed 9 to be P. insidiosum. A retrospective review of archived photographs of colony and direct microscopy of corneal scrapings and clinical records of the cases were performed. Phase 2 began in 2014, in which a simple method of zoospore formation was used for fungal colonies resembling those of P. insidiosum followed by DNA sequencing. RESULTS:The prevalence of P. insidiosum among unidentified fungal isolates from keratitis was 9/162 (5.5%) in phase 1. In phase 2, 4/102 cases (3.9%) of fungal keratitis were identified as P. insidiosum (January–February, 2014). Phylogenetic analysis of all 13 fungal isolates confirmed the identification of P. insidiosum. 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All rights reserved</publisher><subject>Adult ; Antifungal Agents - therapeutic use ; Corneal Ulcer - diagnosis ; Corneal Ulcer - parasitology ; Corneal Ulcer - therapy ; Diagnosis, Differential ; DNA, Protozoan - genetics ; Eye Infections, Parasitic - diagnosis ; Eye Infections, Parasitic - parasitology ; Eye Infections, Parasitic - therapy ; Female ; Gene Amplification ; Humans ; Keratoplasty, Penetrating ; Male ; Middle Aged ; Polymerase Chain Reaction ; Pythiosis - diagnosis ; Pythiosis - parasitology ; Pythiosis - therapy ; Pythium - genetics ; Pythium - isolation &amp; purification ; Retrospective Studies ; RNA, Protozoan - genetics ; RNA, Ribosomal - genetics ; Sequence Analysis, DNA</subject><ispartof>Cornea, 2015-04, Vol.34 (4), p.438-442</ispartof><rights>Copyright © 2015 Wolters Kluwer Health, Inc. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c3014-289424226cecd4ccd16515f721dfe2df83f88ab8adf4535fd6b1f4fe62346a6e3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27923,27924</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/25738236$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Sharma, Savitri</creatorcontrib><creatorcontrib>Balne, Praveen K</creatorcontrib><creatorcontrib>Motukupally, Swapna R</creatorcontrib><creatorcontrib>Das, Sujata</creatorcontrib><creatorcontrib>Garg, Prashant</creatorcontrib><creatorcontrib>Sahu, Srikant K</creatorcontrib><creatorcontrib>Arunasri, Kotakonda</creatorcontrib><creatorcontrib>Manjulatha, Kodiganti</creatorcontrib><creatorcontrib>Mishra, Dilip K</creatorcontrib><creatorcontrib>Shivaji, Sisinthy</creatorcontrib><title>Pythium insidiosum Keratitis: Clinical Profile and Role of DNA Sequencing and Zoospore Formation in Diagnosis</title><title>Cornea</title><addtitle>Cornea</addtitle><description>PURPOSE:To report the molecular and microbiological diagnosis and clinical profile of 13 patients with Pythium insidiosum keratitis. METHODS:Phase 1 of the study consisted of DNA sequencing of the ITS region of the rDNA of 162 stocked morphologically unidentified nonconsecutive fungal isolates from corneal scraping of patients with keratitis (2010–2012). Blast and phylogenetic analyses of the sequences showed 9 to be P. insidiosum. A retrospective review of archived photographs of colony and direct microscopy of corneal scrapings and clinical records of the cases were performed. Phase 2 began in 2014, in which a simple method of zoospore formation was used for fungal colonies resembling those of P. insidiosum followed by DNA sequencing. RESULTS:The prevalence of P. insidiosum among unidentified fungal isolates from keratitis was 9/162 (5.5%) in phase 1. In phase 2, 4/102 cases (3.9%) of fungal keratitis were identified as P. insidiosum (January–February, 2014). Phylogenetic analysis of all 13 fungal isolates confirmed the identification of P. insidiosum. Corneal infiltrates exhibited hyphate edges, tentacle-like extensions, and dot-like infiltrates surrounding the main infiltrate. Response to topical 5% natamycin eye drops with or without oral antifungals was poor (penetrating keratoplasty9 and evisceration2) with a mean follow-up period of 82 days. CONCLUSIONS:P. insidiosum keratitis needs to be considered in the differential diagnosis of severe fungal keratitis. It can be identified using the zoospore formation method and confirmed by ITS DNA sequencing. Lack of response to currently used antifungal drugs calls for evaluation of newer drugs for medical therapy and consideration for early penetrating keratoplasty.</description><subject>Adult</subject><subject>Antifungal Agents - therapeutic use</subject><subject>Corneal Ulcer - diagnosis</subject><subject>Corneal Ulcer - parasitology</subject><subject>Corneal Ulcer - therapy</subject><subject>Diagnosis, Differential</subject><subject>DNA, Protozoan - genetics</subject><subject>Eye Infections, Parasitic - diagnosis</subject><subject>Eye Infections, Parasitic - parasitology</subject><subject>Eye Infections, Parasitic - therapy</subject><subject>Female</subject><subject>Gene Amplification</subject><subject>Humans</subject><subject>Keratoplasty, Penetrating</subject><subject>Male</subject><subject>Middle Aged</subject><subject>Polymerase Chain Reaction</subject><subject>Pythiosis - diagnosis</subject><subject>Pythiosis - parasitology</subject><subject>Pythiosis - therapy</subject><subject>Pythium - genetics</subject><subject>Pythium - isolation &amp; purification</subject><subject>Retrospective Studies</subject><subject>RNA, Protozoan - genetics</subject><subject>RNA, Ribosomal - genetics</subject><subject>Sequence Analysis, DNA</subject><issn>0277-3740</issn><issn>1536-4798</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpdkE1PGzEQhi1UVALtP0CVj71s6q-1N72hUCgqAlTgwmXl2GPi4l2n9q5Q_j0uCVAxkjVjzTuPPS9Ch5RMKZmpb2fzyyn5P7iY7aAJrbmshJo1H9CEMKUqrgTZQ_s5_ykapST7iPZYrXjDuJyg7mo9LP3YYd9nb33MpfwFSQ9-8Pk7ngffe6MDvkrR-QBY9xb_jqWIDh9fHOFr-DtCb3x__9y6izGvYgJ8ElNXILEvYHzs9X0fs8-f0K7TIcPnbT5Atyc_buY_q_PL07P50XllOKGiYs1MMMGYNGCsMMZSWdPaKUatA2Zdw13T6EWjrRM1r52VC-qEA8m4kFoCP0BfN9xViuV_eWg7nw2EoHuIY26plJRzKhkpUrGRmhRzTuDaVfKdTuuWkvaf0W0xun1vdBn7sn1hXHRgX4denH3jPsYwQMoPYXyE1C5Bh2H5zONlwYoRWhNRblU5VPAnUAKI7g</recordid><startdate>201504</startdate><enddate>201504</enddate><creator>Sharma, Savitri</creator><creator>Balne, Praveen K</creator><creator>Motukupally, Swapna R</creator><creator>Das, Sujata</creator><creator>Garg, Prashant</creator><creator>Sahu, Srikant K</creator><creator>Arunasri, Kotakonda</creator><creator>Manjulatha, Kodiganti</creator><creator>Mishra, Dilip K</creator><creator>Shivaji, Sisinthy</creator><general>Copyright Wolters Kluwer Health, Inc. 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subjects Adult
Antifungal Agents - therapeutic use
Corneal Ulcer - diagnosis
Corneal Ulcer - parasitology
Corneal Ulcer - therapy
Diagnosis, Differential
DNA, Protozoan - genetics
Eye Infections, Parasitic - diagnosis
Eye Infections, Parasitic - parasitology
Eye Infections, Parasitic - therapy
Female
Gene Amplification
Humans
Keratoplasty, Penetrating
Male
Middle Aged
Polymerase Chain Reaction
Pythiosis - diagnosis
Pythiosis - parasitology
Pythiosis - therapy
Pythium - genetics
Pythium - isolation & purification
Retrospective Studies
RNA, Protozoan - genetics
RNA, Ribosomal - genetics
Sequence Analysis, DNA
title Pythium insidiosum Keratitis: Clinical Profile and Role of DNA Sequencing and Zoospore Formation in Diagnosis
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