Pythium insidiosum Keratitis: Clinical Profile and Role of DNA Sequencing and Zoospore Formation in Diagnosis
PURPOSE:To report the molecular and microbiological diagnosis and clinical profile of 13 patients with Pythium insidiosum keratitis. METHODS:Phase 1 of the study consisted of DNA sequencing of the ITS region of the rDNA of 162 stocked morphologically unidentified nonconsecutive fungal isolates from...
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creator | Sharma, Savitri Balne, Praveen K Motukupally, Swapna R Das, Sujata Garg, Prashant Sahu, Srikant K Arunasri, Kotakonda Manjulatha, Kodiganti Mishra, Dilip K Shivaji, Sisinthy |
description | PURPOSE:To report the molecular and microbiological diagnosis and clinical profile of 13 patients with Pythium insidiosum keratitis.
METHODS:Phase 1 of the study consisted of DNA sequencing of the ITS region of the rDNA of 162 stocked morphologically unidentified nonconsecutive fungal isolates from corneal scraping of patients with keratitis (2010–2012). Blast and phylogenetic analyses of the sequences showed 9 to be P. insidiosum. A retrospective review of archived photographs of colony and direct microscopy of corneal scrapings and clinical records of the cases were performed. Phase 2 began in 2014, in which a simple method of zoospore formation was used for fungal colonies resembling those of P. insidiosum followed by DNA sequencing.
RESULTS:The prevalence of P. insidiosum among unidentified fungal isolates from keratitis was 9/162 (5.5%) in phase 1. In phase 2, 4/102 cases (3.9%) of fungal keratitis were identified as P. insidiosum (January–February, 2014). Phylogenetic analysis of all 13 fungal isolates confirmed the identification of P. insidiosum. Corneal infiltrates exhibited hyphate edges, tentacle-like extensions, and dot-like infiltrates surrounding the main infiltrate. Response to topical 5% natamycin eye drops with or without oral antifungals was poor (penetrating keratoplasty9 and evisceration2) with a mean follow-up period of 82 days.
CONCLUSIONS:P. insidiosum keratitis needs to be considered in the differential diagnosis of severe fungal keratitis. It can be identified using the zoospore formation method and confirmed by ITS DNA sequencing. Lack of response to currently used antifungal drugs calls for evaluation of newer drugs for medical therapy and consideration for early penetrating keratoplasty. |
doi_str_mv | 10.1097/ICO.0000000000000349 |
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METHODS:Phase 1 of the study consisted of DNA sequencing of the ITS region of the rDNA of 162 stocked morphologically unidentified nonconsecutive fungal isolates from corneal scraping of patients with keratitis (2010–2012). Blast and phylogenetic analyses of the sequences showed 9 to be P. insidiosum. A retrospective review of archived photographs of colony and direct microscopy of corneal scrapings and clinical records of the cases were performed. Phase 2 began in 2014, in which a simple method of zoospore formation was used for fungal colonies resembling those of P. insidiosum followed by DNA sequencing.
RESULTS:The prevalence of P. insidiosum among unidentified fungal isolates from keratitis was 9/162 (5.5%) in phase 1. In phase 2, 4/102 cases (3.9%) of fungal keratitis were identified as P. insidiosum (January–February, 2014). Phylogenetic analysis of all 13 fungal isolates confirmed the identification of P. insidiosum. Corneal infiltrates exhibited hyphate edges, tentacle-like extensions, and dot-like infiltrates surrounding the main infiltrate. Response to topical 5% natamycin eye drops with or without oral antifungals was poor (penetrating keratoplasty9 and evisceration2) with a mean follow-up period of 82 days.
CONCLUSIONS:P. insidiosum keratitis needs to be considered in the differential diagnosis of severe fungal keratitis. It can be identified using the zoospore formation method and confirmed by ITS DNA sequencing. Lack of response to currently used antifungal drugs calls for evaluation of newer drugs for medical therapy and consideration for early penetrating keratoplasty.</description><identifier>ISSN: 0277-3740</identifier><identifier>EISSN: 1536-4798</identifier><identifier>DOI: 10.1097/ICO.0000000000000349</identifier><identifier>PMID: 25738236</identifier><language>eng</language><publisher>United States: Copyright Wolters Kluwer Health, Inc. All rights reserved</publisher><subject>Adult ; Antifungal Agents - therapeutic use ; Corneal Ulcer - diagnosis ; Corneal Ulcer - parasitology ; Corneal Ulcer - therapy ; Diagnosis, Differential ; DNA, Protozoan - genetics ; Eye Infections, Parasitic - diagnosis ; Eye Infections, Parasitic - parasitology ; Eye Infections, Parasitic - therapy ; Female ; Gene Amplification ; Humans ; Keratoplasty, Penetrating ; Male ; Middle Aged ; Polymerase Chain Reaction ; Pythiosis - diagnosis ; Pythiosis - parasitology ; Pythiosis - therapy ; Pythium - genetics ; Pythium - isolation & purification ; Retrospective Studies ; RNA, Protozoan - genetics ; RNA, Ribosomal - genetics ; Sequence Analysis, DNA</subject><ispartof>Cornea, 2015-04, Vol.34 (4), p.438-442</ispartof><rights>Copyright © 2015 Wolters Kluwer Health, Inc. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><cites>FETCH-LOGICAL-c3014-289424226cecd4ccd16515f721dfe2df83f88ab8adf4535fd6b1f4fe62346a6e3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,780,784,27923,27924</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/25738236$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Sharma, Savitri</creatorcontrib><creatorcontrib>Balne, Praveen K</creatorcontrib><creatorcontrib>Motukupally, Swapna R</creatorcontrib><creatorcontrib>Das, Sujata</creatorcontrib><creatorcontrib>Garg, Prashant</creatorcontrib><creatorcontrib>Sahu, Srikant K</creatorcontrib><creatorcontrib>Arunasri, Kotakonda</creatorcontrib><creatorcontrib>Manjulatha, Kodiganti</creatorcontrib><creatorcontrib>Mishra, Dilip K</creatorcontrib><creatorcontrib>Shivaji, Sisinthy</creatorcontrib><title>Pythium insidiosum Keratitis: Clinical Profile and Role of DNA Sequencing and Zoospore Formation in Diagnosis</title><title>Cornea</title><addtitle>Cornea</addtitle><description>PURPOSE:To report the molecular and microbiological diagnosis and clinical profile of 13 patients with Pythium insidiosum keratitis.
METHODS:Phase 1 of the study consisted of DNA sequencing of the ITS region of the rDNA of 162 stocked morphologically unidentified nonconsecutive fungal isolates from corneal scraping of patients with keratitis (2010–2012). Blast and phylogenetic analyses of the sequences showed 9 to be P. insidiosum. A retrospective review of archived photographs of colony and direct microscopy of corneal scrapings and clinical records of the cases were performed. Phase 2 began in 2014, in which a simple method of zoospore formation was used for fungal colonies resembling those of P. insidiosum followed by DNA sequencing.
RESULTS:The prevalence of P. insidiosum among unidentified fungal isolates from keratitis was 9/162 (5.5%) in phase 1. In phase 2, 4/102 cases (3.9%) of fungal keratitis were identified as P. insidiosum (January–February, 2014). Phylogenetic analysis of all 13 fungal isolates confirmed the identification of P. insidiosum. Corneal infiltrates exhibited hyphate edges, tentacle-like extensions, and dot-like infiltrates surrounding the main infiltrate. Response to topical 5% natamycin eye drops with or without oral antifungals was poor (penetrating keratoplasty9 and evisceration2) with a mean follow-up period of 82 days.
CONCLUSIONS:P. insidiosum keratitis needs to be considered in the differential diagnosis of severe fungal keratitis. It can be identified using the zoospore formation method and confirmed by ITS DNA sequencing. Lack of response to currently used antifungal drugs calls for evaluation of newer drugs for medical therapy and consideration for early penetrating keratoplasty.</description><subject>Adult</subject><subject>Antifungal Agents - therapeutic use</subject><subject>Corneal Ulcer - diagnosis</subject><subject>Corneal Ulcer - parasitology</subject><subject>Corneal Ulcer - therapy</subject><subject>Diagnosis, Differential</subject><subject>DNA, Protozoan - genetics</subject><subject>Eye Infections, Parasitic - diagnosis</subject><subject>Eye Infections, Parasitic - parasitology</subject><subject>Eye Infections, Parasitic - therapy</subject><subject>Female</subject><subject>Gene Amplification</subject><subject>Humans</subject><subject>Keratoplasty, Penetrating</subject><subject>Male</subject><subject>Middle Aged</subject><subject>Polymerase Chain Reaction</subject><subject>Pythiosis - diagnosis</subject><subject>Pythiosis - parasitology</subject><subject>Pythiosis - therapy</subject><subject>Pythium - genetics</subject><subject>Pythium - isolation & purification</subject><subject>Retrospective Studies</subject><subject>RNA, Protozoan - genetics</subject><subject>RNA, Ribosomal - genetics</subject><subject>Sequence Analysis, DNA</subject><issn>0277-3740</issn><issn>1536-4798</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNpdkE1PGzEQhi1UVALtP0CVj71s6q-1N72hUCgqAlTgwmXl2GPi4l2n9q5Q_j0uCVAxkjVjzTuPPS9Ch5RMKZmpb2fzyyn5P7iY7aAJrbmshJo1H9CEMKUqrgTZQ_s5_ykapST7iPZYrXjDuJyg7mo9LP3YYd9nb33MpfwFSQ9-8Pk7ngffe6MDvkrR-QBY9xb_jqWIDh9fHOFr-DtCb3x__9y6izGvYgJ8ElNXILEvYHzs9X0fs8-f0K7TIcPnbT5Atyc_buY_q_PL07P50XllOKGiYs1MMMGYNGCsMMZSWdPaKUatA2Zdw13T6EWjrRM1r52VC-qEA8m4kFoCP0BfN9xViuV_eWg7nw2EoHuIY26plJRzKhkpUrGRmhRzTuDaVfKdTuuWkvaf0W0xun1vdBn7sn1hXHRgX4denH3jPsYwQMoPYXyE1C5Bh2H5zONlwYoRWhNRblU5VPAnUAKI7g</recordid><startdate>201504</startdate><enddate>201504</enddate><creator>Sharma, Savitri</creator><creator>Balne, Praveen K</creator><creator>Motukupally, Swapna R</creator><creator>Das, Sujata</creator><creator>Garg, Prashant</creator><creator>Sahu, Srikant K</creator><creator>Arunasri, Kotakonda</creator><creator>Manjulatha, Kodiganti</creator><creator>Mishra, Dilip K</creator><creator>Shivaji, Sisinthy</creator><general>Copyright Wolters Kluwer Health, Inc. All rights reserved</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope></search><sort><creationdate>201504</creationdate><title>Pythium insidiosum Keratitis: Clinical Profile and Role of DNA Sequencing and Zoospore Formation in Diagnosis</title><author>Sharma, Savitri ; Balne, Praveen K ; Motukupally, Swapna R ; Das, Sujata ; Garg, Prashant ; Sahu, Srikant K ; Arunasri, Kotakonda ; Manjulatha, Kodiganti ; Mishra, Dilip K ; Shivaji, Sisinthy</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c3014-289424226cecd4ccd16515f721dfe2df83f88ab8adf4535fd6b1f4fe62346a6e3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>Adult</topic><topic>Antifungal Agents - therapeutic use</topic><topic>Corneal Ulcer - diagnosis</topic><topic>Corneal Ulcer - parasitology</topic><topic>Corneal Ulcer - therapy</topic><topic>Diagnosis, Differential</topic><topic>DNA, Protozoan - genetics</topic><topic>Eye Infections, Parasitic - diagnosis</topic><topic>Eye Infections, Parasitic - parasitology</topic><topic>Eye Infections, Parasitic - therapy</topic><topic>Female</topic><topic>Gene Amplification</topic><topic>Humans</topic><topic>Keratoplasty, Penetrating</topic><topic>Male</topic><topic>Middle Aged</topic><topic>Polymerase Chain Reaction</topic><topic>Pythiosis - diagnosis</topic><topic>Pythiosis - parasitology</topic><topic>Pythiosis - therapy</topic><topic>Pythium - genetics</topic><topic>Pythium - isolation & purification</topic><topic>Retrospective Studies</topic><topic>RNA, Protozoan - genetics</topic><topic>RNA, Ribosomal - genetics</topic><topic>Sequence Analysis, DNA</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Sharma, Savitri</creatorcontrib><creatorcontrib>Balne, Praveen K</creatorcontrib><creatorcontrib>Motukupally, Swapna R</creatorcontrib><creatorcontrib>Das, Sujata</creatorcontrib><creatorcontrib>Garg, Prashant</creatorcontrib><creatorcontrib>Sahu, Srikant K</creatorcontrib><creatorcontrib>Arunasri, Kotakonda</creatorcontrib><creatorcontrib>Manjulatha, Kodiganti</creatorcontrib><creatorcontrib>Mishra, Dilip K</creatorcontrib><creatorcontrib>Shivaji, Sisinthy</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><jtitle>Cornea</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Sharma, Savitri</au><au>Balne, Praveen K</au><au>Motukupally, Swapna R</au><au>Das, Sujata</au><au>Garg, Prashant</au><au>Sahu, Srikant K</au><au>Arunasri, Kotakonda</au><au>Manjulatha, Kodiganti</au><au>Mishra, Dilip K</au><au>Shivaji, Sisinthy</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Pythium insidiosum Keratitis: Clinical Profile and Role of DNA Sequencing and Zoospore Formation in Diagnosis</atitle><jtitle>Cornea</jtitle><addtitle>Cornea</addtitle><date>2015-04</date><risdate>2015</risdate><volume>34</volume><issue>4</issue><spage>438</spage><epage>442</epage><pages>438-442</pages><issn>0277-3740</issn><eissn>1536-4798</eissn><abstract>PURPOSE:To report the molecular and microbiological diagnosis and clinical profile of 13 patients with Pythium insidiosum keratitis.
METHODS:Phase 1 of the study consisted of DNA sequencing of the ITS region of the rDNA of 162 stocked morphologically unidentified nonconsecutive fungal isolates from corneal scraping of patients with keratitis (2010–2012). Blast and phylogenetic analyses of the sequences showed 9 to be P. insidiosum. A retrospective review of archived photographs of colony and direct microscopy of corneal scrapings and clinical records of the cases were performed. Phase 2 began in 2014, in which a simple method of zoospore formation was used for fungal colonies resembling those of P. insidiosum followed by DNA sequencing.
RESULTS:The prevalence of P. insidiosum among unidentified fungal isolates from keratitis was 9/162 (5.5%) in phase 1. In phase 2, 4/102 cases (3.9%) of fungal keratitis were identified as P. insidiosum (January–February, 2014). Phylogenetic analysis of all 13 fungal isolates confirmed the identification of P. insidiosum. Corneal infiltrates exhibited hyphate edges, tentacle-like extensions, and dot-like infiltrates surrounding the main infiltrate. Response to topical 5% natamycin eye drops with or without oral antifungals was poor (penetrating keratoplasty9 and evisceration2) with a mean follow-up period of 82 days.
CONCLUSIONS:P. insidiosum keratitis needs to be considered in the differential diagnosis of severe fungal keratitis. It can be identified using the zoospore formation method and confirmed by ITS DNA sequencing. Lack of response to currently used antifungal drugs calls for evaluation of newer drugs for medical therapy and consideration for early penetrating keratoplasty.</abstract><cop>United States</cop><pub>Copyright Wolters Kluwer Health, Inc. All rights reserved</pub><pmid>25738236</pmid><doi>10.1097/ICO.0000000000000349</doi><tpages>5</tpages></addata></record> |
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subjects | Adult Antifungal Agents - therapeutic use Corneal Ulcer - diagnosis Corneal Ulcer - parasitology Corneal Ulcer - therapy Diagnosis, Differential DNA, Protozoan - genetics Eye Infections, Parasitic - diagnosis Eye Infections, Parasitic - parasitology Eye Infections, Parasitic - therapy Female Gene Amplification Humans Keratoplasty, Penetrating Male Middle Aged Polymerase Chain Reaction Pythiosis - diagnosis Pythiosis - parasitology Pythiosis - therapy Pythium - genetics Pythium - isolation & purification Retrospective Studies RNA, Protozoan - genetics RNA, Ribosomal - genetics Sequence Analysis, DNA |
title | Pythium insidiosum Keratitis: Clinical Profile and Role of DNA Sequencing and Zoospore Formation in Diagnosis |
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