Three histidine residues in the active center of cyclodextrin glucanotransferase from alkalophilic Bacillus sp. 1011: effects of the replacement on pH dependence and transition-state stabilization
Cyclodextrin glucanotransferase (CGTase) catalyzes the formation of cyclodextrins from amylose through an intramolecular transglycosylation reaction. On the basis of the three-dimensional structures of CGTases three histidine residues, which are conserved between CGTases and alpha-amylases, are loca...
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Veröffentlicht in: | Biochemistry (Easton) 1993-07, Vol.32 (26), p.6624-6631 |
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description | Cyclodextrin glucanotransferase (CGTase) catalyzes the formation of cyclodextrins from amylose through an intramolecular transglycosylation reaction. On the basis of the three-dimensional structures of CGTases three histidine residues, which are conserved between CGTases and alpha-amylases, are located at the active center and are proposed to constitute the substrate binding sites. The three histidine residues (His-140, His-233, and His-327) of CGTase from alkalophilic Bacillus sp. 1011 were individually replaced by site-directed mutagenesis to probe their roles in catalysis. Asparagine-replaced CGTases (H140N-, H233N-, and H327N-CGTase) retained cyclization activity but had altered production ratios of alpha-, beta-, and gamma-cyclodextrin. Replacement of histidine by asparagine residues strongly affected the kcat for beta-cyclodextrin-forming, coupling, and hydrolyzing activities, whereas it barely affected the Km values. The activation energies for alpha-cyclodextrin hydrolysis were increased more than 12 kJ/mol by the replacement. Furthermore, the Ki values of acarbose, which is thought to be a transition-state analog of glycosidase catalysis, were 2-3 orders of magnitude larger in asparagine-replaced CGTases than that in wild-type CGTase. Therefore, the three histidine residues participate in the stabilization of the transition state, whereas they participate little in ground-state substrate binding. H327N-CGTase had decreased activity over an alkaline pH range, indicating that His-327 is important for catalysis over an alkaline pH range. |
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On the basis of the three-dimensional structures of CGTases three histidine residues, which are conserved between CGTases and alpha-amylases, are located at the active center and are proposed to constitute the substrate binding sites. The three histidine residues (His-140, His-233, and His-327) of CGTase from alkalophilic Bacillus sp. 1011 were individually replaced by site-directed mutagenesis to probe their roles in catalysis. Asparagine-replaced CGTases (H140N-, H233N-, and H327N-CGTase) retained cyclization activity but had altered production ratios of alpha-, beta-, and gamma-cyclodextrin. Replacement of histidine by asparagine residues strongly affected the kcat for beta-cyclodextrin-forming, coupling, and hydrolyzing activities, whereas it barely affected the Km values. The activation energies for alpha-cyclodextrin hydrolysis were increased more than 12 kJ/mol by the replacement. Furthermore, the Ki values of acarbose, which is thought to be a transition-state analog of glycosidase catalysis, were 2-3 orders of magnitude larger in asparagine-replaced CGTases than that in wild-type CGTase. Therefore, the three histidine residues participate in the stabilization of the transition state, whereas they participate little in ground-state substrate binding. H327N-CGTase had decreased activity over an alkaline pH range, indicating that His-327 is important for catalysis over an alkaline pH range.</description><identifier>ISSN: 0006-2960</identifier><identifier>EISSN: 1520-4995</identifier><identifier>DOI: 10.1021/bi00077a015</identifier><identifier>PMID: 8329389</identifier><language>eng</language><publisher>Washington, DC: American Chemical Society</publisher><subject>Acarbose ; Amino Acid Sequence ; Analytical, structural and metabolic biochemistry ; Bacillus ; Bacillus - enzymology ; Bacillus - genetics ; Base Sequence ; Binding Sites ; Biological and medical sciences ; Carbohydrate Conformation ; Carbohydrate Sequence ; Cloning, Molecular ; Enzyme Stability ; Enzymes and enzyme inhibitors ; Escherichia coli - genetics ; Fundamental and applied biological sciences. Psychology ; Glucosyltransferases - genetics ; Glucosyltransferases - isolation & purification ; Glucosyltransferases - metabolism ; Histidine ; Hydrogen-Ion Concentration ; Kinetics ; Molecular Sequence Data ; Mutagenesis, Site-Directed ; Oligodeoxyribonucleotides ; Plasmids ; Recombinant Proteins - isolation & purification ; Recombinant Proteins - metabolism ; Substrate Specificity ; Transferases ; Trisaccharides - chemistry ; Trisaccharides - metabolism</subject><ispartof>Biochemistry (Easton), 1993-07, Vol.32 (26), p.6624-6631</ispartof><rights>1993 INIST-CNRS</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-a395t-ae33f7a37ffcf13c80179ebfcfb874eb6b414685375a0e71e7a6bfd9916e6073</citedby></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://pubs.acs.org/doi/pdf/10.1021/bi00077a015$$EPDF$$P50$$Gacs$$H</linktopdf><linktohtml>$$Uhttps://pubs.acs.org/doi/10.1021/bi00077a015$$EHTML$$P50$$Gacs$$H</linktohtml><link.rule.ids>314,776,780,2752,27053,27901,27902,56713,56763</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&idt=4862026$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/8329389$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Nakamura, Akira</creatorcontrib><creatorcontrib>Haga, Keiko</creatorcontrib><creatorcontrib>Yamane, Kunio</creatorcontrib><title>Three histidine residues in the active center of cyclodextrin glucanotransferase from alkalophilic Bacillus sp. 1011: effects of the replacement on pH dependence and transition-state stabilization</title><title>Biochemistry (Easton)</title><addtitle>Biochemistry</addtitle><description>Cyclodextrin glucanotransferase (CGTase) catalyzes the formation of cyclodextrins from amylose through an intramolecular transglycosylation reaction. On the basis of the three-dimensional structures of CGTases three histidine residues, which are conserved between CGTases and alpha-amylases, are located at the active center and are proposed to constitute the substrate binding sites. The three histidine residues (His-140, His-233, and His-327) of CGTase from alkalophilic Bacillus sp. 1011 were individually replaced by site-directed mutagenesis to probe their roles in catalysis. Asparagine-replaced CGTases (H140N-, H233N-, and H327N-CGTase) retained cyclization activity but had altered production ratios of alpha-, beta-, and gamma-cyclodextrin. Replacement of histidine by asparagine residues strongly affected the kcat for beta-cyclodextrin-forming, coupling, and hydrolyzing activities, whereas it barely affected the Km values. The activation energies for alpha-cyclodextrin hydrolysis were increased more than 12 kJ/mol by the replacement. Furthermore, the Ki values of acarbose, which is thought to be a transition-state analog of glycosidase catalysis, were 2-3 orders of magnitude larger in asparagine-replaced CGTases than that in wild-type CGTase. Therefore, the three histidine residues participate in the stabilization of the transition state, whereas they participate little in ground-state substrate binding. H327N-CGTase had decreased activity over an alkaline pH range, indicating that His-327 is important for catalysis over an alkaline pH range.</description><subject>Acarbose</subject><subject>Amino Acid Sequence</subject><subject>Analytical, structural and metabolic biochemistry</subject><subject>Bacillus</subject><subject>Bacillus - enzymology</subject><subject>Bacillus - genetics</subject><subject>Base Sequence</subject><subject>Binding Sites</subject><subject>Biological and medical sciences</subject><subject>Carbohydrate Conformation</subject><subject>Carbohydrate Sequence</subject><subject>Cloning, Molecular</subject><subject>Enzyme Stability</subject><subject>Enzymes and enzyme inhibitors</subject><subject>Escherichia coli - genetics</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Glucosyltransferases - genetics</subject><subject>Glucosyltransferases - isolation & purification</subject><subject>Glucosyltransferases - metabolism</subject><subject>Histidine</subject><subject>Hydrogen-Ion Concentration</subject><subject>Kinetics</subject><subject>Molecular Sequence Data</subject><subject>Mutagenesis, Site-Directed</subject><subject>Oligodeoxyribonucleotides</subject><subject>Plasmids</subject><subject>Recombinant Proteins - isolation & purification</subject><subject>Recombinant Proteins - metabolism</subject><subject>Substrate Specificity</subject><subject>Transferases</subject><subject>Trisaccharides - chemistry</subject><subject>Trisaccharides - metabolism</subject><issn>0006-2960</issn><issn>1520-4995</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1993</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNptkU1v1DAQhiMEKkvhxBnJBwQHlGLnw064QcWyoEogNXdr4oxZt1472A5q-X38MLzsasWBi62ZefTOx1sUzxm9YLRib0dDKRUCKGsfFCvWVrRs-r59WKxynpdVz-nj4kmMNzlsqGjOirOurvq661fF72EbEMnWxGQm45AEjGZaMBLjSNoiAZXMTyQKXcJAvCbqXlk_4V0KmfhuFwXOpwAuagwQkejgdwTsLVg_b401inwAZaxdIonzBWGUsXcEtUaV4l5v3yTgbEHhLjch3pF5Qyac0U3oVJ7ATeRvA5OMd2VMkJDkd8ziv2Cfe1o80mAjPjv-58Ww_jhcbsqrr58-X76_KqHu21QC1rUWUAutlWa16igTPY45GDvR4MjHhjW8a2vRAkXBUAAf9dT3jCOnoj4vXh1k5-B_5BMluTNRobXg0C9RMs5p0zZ9Bt8cQBV8jAG1nIPZQbiXjMq9ZfIfyzL94ii7jDucTuzRo1x_eaxDVGB1PoUy8YQ1Ha9oxTNWHrBsJd6dyhBuJRd5JTl8u5bD-ku7YddCrjP_-sCDivLGL8Hl0_13wD85D75b</recordid><startdate>19930701</startdate><enddate>19930701</enddate><creator>Nakamura, Akira</creator><creator>Haga, Keiko</creator><creator>Yamane, Kunio</creator><general>American Chemical Society</general><scope>BSCLL</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QL</scope><scope>C1K</scope></search><sort><creationdate>19930701</creationdate><title>Three histidine residues in the active center of cyclodextrin glucanotransferase from alkalophilic Bacillus sp. 1011: effects of the replacement on pH dependence and transition-state stabilization</title><author>Nakamura, Akira ; Haga, Keiko ; Yamane, Kunio</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a395t-ae33f7a37ffcf13c80179ebfcfb874eb6b414685375a0e71e7a6bfd9916e6073</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1993</creationdate><topic>Acarbose</topic><topic>Amino Acid Sequence</topic><topic>Analytical, structural and metabolic biochemistry</topic><topic>Bacillus</topic><topic>Bacillus - enzymology</topic><topic>Bacillus - genetics</topic><topic>Base Sequence</topic><topic>Binding Sites</topic><topic>Biological and medical sciences</topic><topic>Carbohydrate Conformation</topic><topic>Carbohydrate Sequence</topic><topic>Cloning, Molecular</topic><topic>Enzyme Stability</topic><topic>Enzymes and enzyme inhibitors</topic><topic>Escherichia coli - genetics</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Glucosyltransferases - genetics</topic><topic>Glucosyltransferases - isolation & purification</topic><topic>Glucosyltransferases - metabolism</topic><topic>Histidine</topic><topic>Hydrogen-Ion Concentration</topic><topic>Kinetics</topic><topic>Molecular Sequence Data</topic><topic>Mutagenesis, Site-Directed</topic><topic>Oligodeoxyribonucleotides</topic><topic>Plasmids</topic><topic>Recombinant Proteins - isolation & purification</topic><topic>Recombinant Proteins - metabolism</topic><topic>Substrate Specificity</topic><topic>Transferases</topic><topic>Trisaccharides - chemistry</topic><topic>Trisaccharides - metabolism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Nakamura, Akira</creatorcontrib><creatorcontrib>Haga, Keiko</creatorcontrib><creatorcontrib>Yamane, Kunio</creatorcontrib><collection>Istex</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Environmental Sciences and Pollution Management</collection><jtitle>Biochemistry (Easton)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Nakamura, Akira</au><au>Haga, Keiko</au><au>Yamane, Kunio</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Three histidine residues in the active center of cyclodextrin glucanotransferase from alkalophilic Bacillus sp. 1011: effects of the replacement on pH dependence and transition-state stabilization</atitle><jtitle>Biochemistry (Easton)</jtitle><addtitle>Biochemistry</addtitle><date>1993-07-01</date><risdate>1993</risdate><volume>32</volume><issue>26</issue><spage>6624</spage><epage>6631</epage><pages>6624-6631</pages><issn>0006-2960</issn><eissn>1520-4995</eissn><abstract>Cyclodextrin glucanotransferase (CGTase) catalyzes the formation of cyclodextrins from amylose through an intramolecular transglycosylation reaction. On the basis of the three-dimensional structures of CGTases three histidine residues, which are conserved between CGTases and alpha-amylases, are located at the active center and are proposed to constitute the substrate binding sites. The three histidine residues (His-140, His-233, and His-327) of CGTase from alkalophilic Bacillus sp. 1011 were individually replaced by site-directed mutagenesis to probe their roles in catalysis. Asparagine-replaced CGTases (H140N-, H233N-, and H327N-CGTase) retained cyclization activity but had altered production ratios of alpha-, beta-, and gamma-cyclodextrin. Replacement of histidine by asparagine residues strongly affected the kcat for beta-cyclodextrin-forming, coupling, and hydrolyzing activities, whereas it barely affected the Km values. The activation energies for alpha-cyclodextrin hydrolysis were increased more than 12 kJ/mol by the replacement. Furthermore, the Ki values of acarbose, which is thought to be a transition-state analog of glycosidase catalysis, were 2-3 orders of magnitude larger in asparagine-replaced CGTases than that in wild-type CGTase. Therefore, the three histidine residues participate in the stabilization of the transition state, whereas they participate little in ground-state substrate binding. H327N-CGTase had decreased activity over an alkaline pH range, indicating that His-327 is important for catalysis over an alkaline pH range.</abstract><cop>Washington, DC</cop><pub>American Chemical Society</pub><pmid>8329389</pmid><doi>10.1021/bi00077a015</doi><tpages>8</tpages></addata></record> |
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subjects | Acarbose Amino Acid Sequence Analytical, structural and metabolic biochemistry Bacillus Bacillus - enzymology Bacillus - genetics Base Sequence Binding Sites Biological and medical sciences Carbohydrate Conformation Carbohydrate Sequence Cloning, Molecular Enzyme Stability Enzymes and enzyme inhibitors Escherichia coli - genetics Fundamental and applied biological sciences. Psychology Glucosyltransferases - genetics Glucosyltransferases - isolation & purification Glucosyltransferases - metabolism Histidine Hydrogen-Ion Concentration Kinetics Molecular Sequence Data Mutagenesis, Site-Directed Oligodeoxyribonucleotides Plasmids Recombinant Proteins - isolation & purification Recombinant Proteins - metabolism Substrate Specificity Transferases Trisaccharides - chemistry Trisaccharides - metabolism |
title | Three histidine residues in the active center of cyclodextrin glucanotransferase from alkalophilic Bacillus sp. 1011: effects of the replacement on pH dependence and transition-state stabilization |
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