Methanogenic archaea diversity in Hanwoo (Bos taurus coreanae) rumen fluid, rectal dung, and barn floor manure using a culture-independent method based on mcrA gene sequences

The diversity of methanogenic archaea associated with Korean Hanwoo cattle was analyzed using mcrA gene sequences from samples of rumen fluid (RF), rectal dung (RD), and barn floor manure (BFM). The predominant species were Methanobrevibacter ruminantium in RF and BFM(63.6% and 62.4%, respectively)...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Anaerobe 2014-06, Vol.27, p.77-81
Hauptverfasser: Daquiado, Aileen Rose, Cho, Kye Man, Kim, Tae Young, Kim, Sam Churl, Chang, Hong-Hee, Lee, Yong Bok
Format: Artikel
Sprache:eng
Schlagworte:
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
container_end_page 81
container_issue
container_start_page 77
container_title Anaerobe
container_volume 27
creator Daquiado, Aileen Rose
Cho, Kye Man
Kim, Tae Young
Kim, Sam Churl
Chang, Hong-Hee
Lee, Yong Bok
description The diversity of methanogenic archaea associated with Korean Hanwoo cattle was analyzed using mcrA gene sequences from samples of rumen fluid (RF), rectal dung (RD), and barn floor manure (BFM). The predominant species were Methanobrevibacter ruminantium in RF and BFM(63.6% and 62.4%, respectively) and Methanocorpusculum labreanum in RD (53.2%).
doi_str_mv 10.1016/j.anaerobe.2014.01.008
format Article
fullrecord <record><control><sourceid>proquest_cross</sourceid><recordid>TN_cdi_proquest_miscellaneous_1660415233</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><els_id>S1075996414000092</els_id><sourcerecordid>1524341140</sourcerecordid><originalsourceid>FETCH-LOGICAL-c467t-e637728e4d5c65d49e736ad2d84daf1a5881a659c9b402085ab93154b73b68c23</originalsourceid><addsrcrecordid>eNqFkc1u1DAUhSMEoqXwCtVdFqkZ7MR2kh2lAopUxAbW1o19Z-pRYg92XNSX4hlxNC3bbvwjn-Nzdb6qOudswxlXH_Yb9EgxjLRpGBcbxjeM9S-qU84GWfdNJ16u507Ww6DESfUmpT1jnAspX1cnjZCsV6I9rf5-p-UOfdiRdwYwmjskBOvuKSa3PIDzcIP-Twhw8SkkWDDHnMCESGv-e4h5Jg_bKTt7CZHMghPY7HeXgN7CiHF9DCHCjD5Hgpyc3wGCydNS7rXzlg5UFr_AXEYJqymRheBhNvEKymAEiX5n8obS2-rVFqdE7x73s-rXl88_r2_q2x9fv11f3dZGqG6pSbVd1_QkrDRKWjFQ1yq0je2FxS1H2fcclRzMMArWsF7iOLRcirFrR9Wbpj2rLo7_HmIo0WnRs0uGpgk9hZw0V4oJLpu2fV4qG9GK0jwrUnWUmhhSirTVh-hmjA-aM71i1Xv9hFWvWDXjumAtxvPHjDzOZP_bnjgWwcejgEop946iTsatjVm3QtE2uOcy_gFkYbja</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1524341140</pqid></control><display><type>article</type><title>Methanogenic archaea diversity in Hanwoo (Bos taurus coreanae) rumen fluid, rectal dung, and barn floor manure using a culture-independent method based on mcrA gene sequences</title><source>MEDLINE</source><source>Elsevier ScienceDirect Journals</source><creator>Daquiado, Aileen Rose ; Cho, Kye Man ; Kim, Tae Young ; Kim, Sam Churl ; Chang, Hong-Hee ; Lee, Yong Bok</creator><creatorcontrib>Daquiado, Aileen Rose ; Cho, Kye Man ; Kim, Tae Young ; Kim, Sam Churl ; Chang, Hong-Hee ; Lee, Yong Bok</creatorcontrib><description>The diversity of methanogenic archaea associated with Korean Hanwoo cattle was analyzed using mcrA gene sequences from samples of rumen fluid (RF), rectal dung (RD), and barn floor manure (BFM). The predominant species were Methanobrevibacter ruminantium in RF and BFM(63.6% and 62.4%, respectively) and Methanocorpusculum labreanum in RD (53.2%).</description><identifier>ISSN: 1075-9964</identifier><identifier>EISSN: 1095-8274</identifier><identifier>DOI: 10.1016/j.anaerobe.2014.01.008</identifier><identifier>PMID: 24508643</identifier><language>eng</language><publisher>England: Elsevier Ltd</publisher><subject>Animals ; Archaea ; Archaea - classification ; Archaea - genetics ; Archaea - isolation &amp; purification ; Archaea - metabolism ; Biodiversity ; Bos taurus ; Cattle ; DNA, Archaeal - chemistry ; DNA, Archaeal - genetics ; Dung ; Feces - microbiology ; Manure ; Manure - microbiology ; mcrA gene ; Methane - metabolism ; Methanobrevibacter ruminantium ; Methanocorpusculum ; Methanogenic archaea ; Molecular Sequence Data ; Oxidoreductases - genetics ; Rumen ; Rumen - microbiology ; Sequence Analysis, DNA</subject><ispartof>Anaerobe, 2014-06, Vol.27, p.77-81</ispartof><rights>2014</rights><rights>Copyright © 2014. Published by Elsevier Ltd.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c467t-e637728e4d5c65d49e736ad2d84daf1a5881a659c9b402085ab93154b73b68c23</citedby><cites>FETCH-LOGICAL-c467t-e637728e4d5c65d49e736ad2d84daf1a5881a659c9b402085ab93154b73b68c23</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://www.sciencedirect.com/science/article/pii/S1075996414000092$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3536,27903,27904,65309</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/24508643$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Daquiado, Aileen Rose</creatorcontrib><creatorcontrib>Cho, Kye Man</creatorcontrib><creatorcontrib>Kim, Tae Young</creatorcontrib><creatorcontrib>Kim, Sam Churl</creatorcontrib><creatorcontrib>Chang, Hong-Hee</creatorcontrib><creatorcontrib>Lee, Yong Bok</creatorcontrib><title>Methanogenic archaea diversity in Hanwoo (Bos taurus coreanae) rumen fluid, rectal dung, and barn floor manure using a culture-independent method based on mcrA gene sequences</title><title>Anaerobe</title><addtitle>Anaerobe</addtitle><description>The diversity of methanogenic archaea associated with Korean Hanwoo cattle was analyzed using mcrA gene sequences from samples of rumen fluid (RF), rectal dung (RD), and barn floor manure (BFM). The predominant species were Methanobrevibacter ruminantium in RF and BFM(63.6% and 62.4%, respectively) and Methanocorpusculum labreanum in RD (53.2%).</description><subject>Animals</subject><subject>Archaea</subject><subject>Archaea - classification</subject><subject>Archaea - genetics</subject><subject>Archaea - isolation &amp; purification</subject><subject>Archaea - metabolism</subject><subject>Biodiversity</subject><subject>Bos taurus</subject><subject>Cattle</subject><subject>DNA, Archaeal - chemistry</subject><subject>DNA, Archaeal - genetics</subject><subject>Dung</subject><subject>Feces - microbiology</subject><subject>Manure</subject><subject>Manure - microbiology</subject><subject>mcrA gene</subject><subject>Methane - metabolism</subject><subject>Methanobrevibacter ruminantium</subject><subject>Methanocorpusculum</subject><subject>Methanogenic archaea</subject><subject>Molecular Sequence Data</subject><subject>Oxidoreductases - genetics</subject><subject>Rumen</subject><subject>Rumen - microbiology</subject><subject>Sequence Analysis, DNA</subject><issn>1075-9964</issn><issn>1095-8274</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkc1u1DAUhSMEoqXwCtVdFqkZ7MR2kh2lAopUxAbW1o19Z-pRYg92XNSX4hlxNC3bbvwjn-Nzdb6qOudswxlXH_Yb9EgxjLRpGBcbxjeM9S-qU84GWfdNJ16u507Ww6DESfUmpT1jnAspX1cnjZCsV6I9rf5-p-UOfdiRdwYwmjskBOvuKSa3PIDzcIP-Twhw8SkkWDDHnMCESGv-e4h5Jg_bKTt7CZHMghPY7HeXgN7CiHF9DCHCjD5Hgpyc3wGCydNS7rXzlg5UFr_AXEYJqymRheBhNvEKymAEiX5n8obS2-rVFqdE7x73s-rXl88_r2_q2x9fv11f3dZGqG6pSbVd1_QkrDRKWjFQ1yq0je2FxS1H2fcclRzMMArWsF7iOLRcirFrR9Wbpj2rLo7_HmIo0WnRs0uGpgk9hZw0V4oJLpu2fV4qG9GK0jwrUnWUmhhSirTVh-hmjA-aM71i1Xv9hFWvWDXjumAtxvPHjDzOZP_bnjgWwcejgEop946iTsatjVm3QtE2uOcy_gFkYbja</recordid><startdate>20140601</startdate><enddate>20140601</enddate><creator>Daquiado, Aileen Rose</creator><creator>Cho, Kye Man</creator><creator>Kim, Tae Young</creator><creator>Kim, Sam Churl</creator><creator>Chang, Hong-Hee</creator><creator>Lee, Yong Bok</creator><general>Elsevier Ltd</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope></search><sort><creationdate>20140601</creationdate><title>Methanogenic archaea diversity in Hanwoo (Bos taurus coreanae) rumen fluid, rectal dung, and barn floor manure using a culture-independent method based on mcrA gene sequences</title><author>Daquiado, Aileen Rose ; Cho, Kye Man ; Kim, Tae Young ; Kim, Sam Churl ; Chang, Hong-Hee ; Lee, Yong Bok</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c467t-e637728e4d5c65d49e736ad2d84daf1a5881a659c9b402085ab93154b73b68c23</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>Animals</topic><topic>Archaea</topic><topic>Archaea - classification</topic><topic>Archaea - genetics</topic><topic>Archaea - isolation &amp; purification</topic><topic>Archaea - metabolism</topic><topic>Biodiversity</topic><topic>Bos taurus</topic><topic>Cattle</topic><topic>DNA, Archaeal - chemistry</topic><topic>DNA, Archaeal - genetics</topic><topic>Dung</topic><topic>Feces - microbiology</topic><topic>Manure</topic><topic>Manure - microbiology</topic><topic>mcrA gene</topic><topic>Methane - metabolism</topic><topic>Methanobrevibacter ruminantium</topic><topic>Methanocorpusculum</topic><topic>Methanogenic archaea</topic><topic>Molecular Sequence Data</topic><topic>Oxidoreductases - genetics</topic><topic>Rumen</topic><topic>Rumen - microbiology</topic><topic>Sequence Analysis, DNA</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Daquiado, Aileen Rose</creatorcontrib><creatorcontrib>Cho, Kye Man</creatorcontrib><creatorcontrib>Kim, Tae Young</creatorcontrib><creatorcontrib>Kim, Sam Churl</creatorcontrib><creatorcontrib>Chang, Hong-Hee</creatorcontrib><creatorcontrib>Lee, Yong Bok</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><jtitle>Anaerobe</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Daquiado, Aileen Rose</au><au>Cho, Kye Man</au><au>Kim, Tae Young</au><au>Kim, Sam Churl</au><au>Chang, Hong-Hee</au><au>Lee, Yong Bok</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Methanogenic archaea diversity in Hanwoo (Bos taurus coreanae) rumen fluid, rectal dung, and barn floor manure using a culture-independent method based on mcrA gene sequences</atitle><jtitle>Anaerobe</jtitle><addtitle>Anaerobe</addtitle><date>2014-06-01</date><risdate>2014</risdate><volume>27</volume><spage>77</spage><epage>81</epage><pages>77-81</pages><issn>1075-9964</issn><eissn>1095-8274</eissn><abstract>The diversity of methanogenic archaea associated with Korean Hanwoo cattle was analyzed using mcrA gene sequences from samples of rumen fluid (RF), rectal dung (RD), and barn floor manure (BFM). The predominant species were Methanobrevibacter ruminantium in RF and BFM(63.6% and 62.4%, respectively) and Methanocorpusculum labreanum in RD (53.2%).</abstract><cop>England</cop><pub>Elsevier Ltd</pub><pmid>24508643</pmid><doi>10.1016/j.anaerobe.2014.01.008</doi><tpages>5</tpages></addata></record>
fulltext fulltext
identifier ISSN: 1075-9964
ispartof Anaerobe, 2014-06, Vol.27, p.77-81
issn 1075-9964
1095-8274
language eng
recordid cdi_proquest_miscellaneous_1660415233
source MEDLINE; Elsevier ScienceDirect Journals
subjects Animals
Archaea
Archaea - classification
Archaea - genetics
Archaea - isolation & purification
Archaea - metabolism
Biodiversity
Bos taurus
Cattle
DNA, Archaeal - chemistry
DNA, Archaeal - genetics
Dung
Feces - microbiology
Manure
Manure - microbiology
mcrA gene
Methane - metabolism
Methanobrevibacter ruminantium
Methanocorpusculum
Methanogenic archaea
Molecular Sequence Data
Oxidoreductases - genetics
Rumen
Rumen - microbiology
Sequence Analysis, DNA
title Methanogenic archaea diversity in Hanwoo (Bos taurus coreanae) rumen fluid, rectal dung, and barn floor manure using a culture-independent method based on mcrA gene sequences
url https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-01-25T05%3A31%3A46IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_cross&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Methanogenic%20archaea%20diversity%20in%20Hanwoo%20(Bos%20taurus%20coreanae)%20rumen%20fluid,%20rectal%20dung,%20and%20barn%20floor%20manure%20using%20a%20culture-independent%20method%20based%20on%20mcrA%20gene%20sequences&rft.jtitle=Anaerobe&rft.au=Daquiado,%20Aileen%20Rose&rft.date=2014-06-01&rft.volume=27&rft.spage=77&rft.epage=81&rft.pages=77-81&rft.issn=1075-9964&rft.eissn=1095-8274&rft_id=info:doi/10.1016/j.anaerobe.2014.01.008&rft_dat=%3Cproquest_cross%3E1524341140%3C/proquest_cross%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=1524341140&rft_id=info:pmid/24508643&rft_els_id=S1075996414000092&rfr_iscdi=true