Recurrence of carbamoyl phosphate synthetase 1 (CPS1) deficiency in Turkish patients: Characterization of a founder mutation by use of recombinant CPS1 from insect cells expression
Carbamoyl phosphate synthetase 1 (CPS1) deficiency due to CPS1 mutations is a rare autosomal-recessive urea cycle disorder causing hyperammonemia that can lead to death or severe neurological impairment. CPS1 catalyzes carbamoyl phosphate formation from ammonia, bicarbonate and two molecules of ATP,...
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Veröffentlicht in: | Molecular genetics and metabolism 2014-12, Vol.113 (4), p.267-273 |
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creator | Hu, Liyan Diez-Fernandez, Carmen Rüfenacht, Véronique Hismi, Burcu Öztürk Ünal, Özlem Soyucen, Erdogan Çoker, Mahmut Bayraktar, Bilge Tanyeri Gunduz, Mehmet Kiykim, Ertugrul Olgac, Asburce Pérez-Tur, Jordi Rubio, Vicente Häberle, Johannes |
description | Carbamoyl phosphate synthetase 1 (CPS1) deficiency due to CPS1 mutations is a rare autosomal-recessive urea cycle disorder causing hyperammonemia that can lead to death or severe neurological impairment. CPS1 catalyzes carbamoyl phosphate formation from ammonia, bicarbonate and two molecules of ATP, and requires the allosteric activator N-acetyl-L-glutamate. Clinical mutations occur in the entire CPS1 coding region, but mainly in single families, with little recurrence. We characterized here the only currently known recurrent CPS1 mutation, p.Val1013del, found in eleven unrelated patients of Turkish descent using recombinant His-tagged wild type or mutant CPS1 expressed in baculovirus/insect cell system. The global CPS1 reaction and the ATPase and ATP synthesis partial reactions that reflect, respectively, the bicarbonate and the carbamate phosphorylation steps, were assayed. We found that CPS1 wild type and V1013del mutant showed comparable expression levels and purity but the mutant CPS1 exhibited no significant residual activities. In the CPS1 structural model, V1013 belongs to a highly hydrophobic β-strand at the middle of the central β-sheet of the A subdomain of the carbamate phosphorylation domain and is close to the predicted carbamate tunnel that links both phosphorylation sites. Haplotype studies suggested that p.Val1013del is a founder mutation. In conclusion, the mutation p.V1013del inactivates CPS1 but does not render the enzyme grossly unstable or insoluble. Recurrence of this particular mutation in Turkish patients is likely due to a founder effect, which is consistent with the frequent consanguinity observed in the affected population.
•The only known recurrent CPS1 mutation p.Val1013del is studied.•This mutation is close to the predicted carbamate tunnel that links both CPS1 phosphorylation sites.•This mutation was expressed in baculovirus/insect cell system.•The mutant CPS1, while forming a stable protein, exhibited no significant residual activity.•Haplotype studies suggested that p.Val1013del is a founder mutation. |
doi_str_mv | 10.1016/j.ymgme.2014.09.014 |
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•The only known recurrent CPS1 mutation p.Val1013del is studied.•This mutation is close to the predicted carbamate tunnel that links both CPS1 phosphorylation sites.•This mutation was expressed in baculovirus/insect cell system.•The mutant CPS1, while forming a stable protein, exhibited no significant residual activity.•Haplotype studies suggested that p.Val1013del is a founder mutation.</description><identifier>ISSN: 1096-7192</identifier><identifier>EISSN: 1096-7206</identifier><identifier>DOI: 10.1016/j.ymgme.2014.09.014</identifier><identifier>PMID: 25410056</identifier><language>eng</language><publisher>United States: Elsevier Inc</publisher><subject>Animals ; Baculovirus ; Baculovirus/insect cell expression system ; Carbamoyl phosphate synthetase 1 (CPS1) deficiency ; Carbamoyl-Phosphate Synthase (Ammonia) - chemistry ; Carbamoyl-Phosphate Synthase (Ammonia) - genetics ; Carbamoyl-Phosphate Synthase (Ammonia) - metabolism ; Carbamoyl-Phosphate Synthase I Deficiency Disease - genetics ; Enzyme activity ; Enzyme Stability ; Female ; Founder Effect ; Founder mutation ; Humans ; Infant, Newborn ; Male ; Protein Structure, Tertiary ; Recombinant Fusion Proteins ; Sequence Deletion ; Sf9 Cells ; Spodoptera ; Thermostability ; Turkey ; Urea cycle disorder</subject><ispartof>Molecular genetics and metabolism, 2014-12, Vol.113 (4), p.267-273</ispartof><rights>2014 Elsevier Inc.</rights><rights>Copyright © 2014 Elsevier Inc. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c462t-cebf407cd14dee0311c5e6de9ebd8426ae86d39292672451aa3715d0976115563</citedby><cites>FETCH-LOGICAL-c462t-cebf407cd14dee0311c5e6de9ebd8426ae86d39292672451aa3715d0976115563</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.ymgme.2014.09.014$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,776,780,3536,27903,27904,45974</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/25410056$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Hu, Liyan</creatorcontrib><creatorcontrib>Diez-Fernandez, Carmen</creatorcontrib><creatorcontrib>Rüfenacht, Véronique</creatorcontrib><creatorcontrib>Hismi, Burcu Öztürk</creatorcontrib><creatorcontrib>Ünal, Özlem</creatorcontrib><creatorcontrib>Soyucen, Erdogan</creatorcontrib><creatorcontrib>Çoker, Mahmut</creatorcontrib><creatorcontrib>Bayraktar, Bilge Tanyeri</creatorcontrib><creatorcontrib>Gunduz, Mehmet</creatorcontrib><creatorcontrib>Kiykim, Ertugrul</creatorcontrib><creatorcontrib>Olgac, Asburce</creatorcontrib><creatorcontrib>Pérez-Tur, Jordi</creatorcontrib><creatorcontrib>Rubio, Vicente</creatorcontrib><creatorcontrib>Häberle, Johannes</creatorcontrib><title>Recurrence of carbamoyl phosphate synthetase 1 (CPS1) deficiency in Turkish patients: Characterization of a founder mutation by use of recombinant CPS1 from insect cells expression</title><title>Molecular genetics and metabolism</title><addtitle>Mol Genet Metab</addtitle><description>Carbamoyl phosphate synthetase 1 (CPS1) deficiency due to CPS1 mutations is a rare autosomal-recessive urea cycle disorder causing hyperammonemia that can lead to death or severe neurological impairment. CPS1 catalyzes carbamoyl phosphate formation from ammonia, bicarbonate and two molecules of ATP, and requires the allosteric activator N-acetyl-L-glutamate. Clinical mutations occur in the entire CPS1 coding region, but mainly in single families, with little recurrence. We characterized here the only currently known recurrent CPS1 mutation, p.Val1013del, found in eleven unrelated patients of Turkish descent using recombinant His-tagged wild type or mutant CPS1 expressed in baculovirus/insect cell system. The global CPS1 reaction and the ATPase and ATP synthesis partial reactions that reflect, respectively, the bicarbonate and the carbamate phosphorylation steps, were assayed. We found that CPS1 wild type and V1013del mutant showed comparable expression levels and purity but the mutant CPS1 exhibited no significant residual activities. In the CPS1 structural model, V1013 belongs to a highly hydrophobic β-strand at the middle of the central β-sheet of the A subdomain of the carbamate phosphorylation domain and is close to the predicted carbamate tunnel that links both phosphorylation sites. Haplotype studies suggested that p.Val1013del is a founder mutation. In conclusion, the mutation p.V1013del inactivates CPS1 but does not render the enzyme grossly unstable or insoluble. Recurrence of this particular mutation in Turkish patients is likely due to a founder effect, which is consistent with the frequent consanguinity observed in the affected population.
•The only known recurrent CPS1 mutation p.Val1013del is studied.•This mutation is close to the predicted carbamate tunnel that links both CPS1 phosphorylation sites.•This mutation was expressed in baculovirus/insect cell system.•The mutant CPS1, while forming a stable protein, exhibited no significant residual activity.•Haplotype studies suggested that p.Val1013del is a founder mutation.</description><subject>Animals</subject><subject>Baculovirus</subject><subject>Baculovirus/insect cell expression system</subject><subject>Carbamoyl phosphate synthetase 1 (CPS1) deficiency</subject><subject>Carbamoyl-Phosphate Synthase (Ammonia) - chemistry</subject><subject>Carbamoyl-Phosphate Synthase (Ammonia) - genetics</subject><subject>Carbamoyl-Phosphate Synthase (Ammonia) - metabolism</subject><subject>Carbamoyl-Phosphate Synthase I Deficiency Disease - genetics</subject><subject>Enzyme activity</subject><subject>Enzyme Stability</subject><subject>Female</subject><subject>Founder Effect</subject><subject>Founder mutation</subject><subject>Humans</subject><subject>Infant, Newborn</subject><subject>Male</subject><subject>Protein Structure, Tertiary</subject><subject>Recombinant Fusion Proteins</subject><subject>Sequence Deletion</subject><subject>Sf9 Cells</subject><subject>Spodoptera</subject><subject>Thermostability</subject><subject>Turkey</subject><subject>Urea cycle disorder</subject><issn>1096-7192</issn><issn>1096-7206</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNUctu1DAUjRCIlsIXICEvy2KCb-I4DRKLakQBqRIIytpy7BviYRIHXweRfhcfiDPTskSsjnV1HtY5WfYceA4c5KtdvgzfBswLDiLnTZ7gQXYKvJGbuuDy4f0bmuIke0K04xygasTj7KSoBHBeydPs92c0cwg4GmS-Y0aHVg9-2bOp9zT1OiKjZYw9Rk3IgJ1vP32Bl8xi54xLqoW5kd3M4bujnk06pluk12zb66BNxOBu082Pq7dmnZ9Hi4ENczxe24XNdAgOaPzQulGPka0RrAt-SN6EJjKD-z0x_DUFJEq6p9mjTu8Jn93hWfb16u3N9v3m-uO7D9vL640Rsogbg20neG0sCIvISwBTobTYYGsvRCE1XkhbNkVTyLoQFWhd1lBZ3tQyFVXJ8iw7P_pOwf-YkaIaHK2f0SP6mRRIyQUAF_V_UEtRp9p5majlkWqCJwrYqSm4QYdFAVfrsmqnDsuqdVnFG5UgqV7cBcztgPav5n7KRHhzJGBq5KfDoOiwEFqXyo3KevfPgD91Drfe</recordid><startdate>20141201</startdate><enddate>20141201</enddate><creator>Hu, Liyan</creator><creator>Diez-Fernandez, Carmen</creator><creator>Rüfenacht, Véronique</creator><creator>Hismi, Burcu Öztürk</creator><creator>Ünal, Özlem</creator><creator>Soyucen, Erdogan</creator><creator>Çoker, Mahmut</creator><creator>Bayraktar, Bilge Tanyeri</creator><creator>Gunduz, Mehmet</creator><creator>Kiykim, Ertugrul</creator><creator>Olgac, Asburce</creator><creator>Pérez-Tur, Jordi</creator><creator>Rubio, Vicente</creator><creator>Häberle, Johannes</creator><general>Elsevier Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope></search><sort><creationdate>20141201</creationdate><title>Recurrence of carbamoyl phosphate synthetase 1 (CPS1) deficiency in Turkish patients: Characterization of a founder mutation by use of recombinant CPS1 from insect cells expression</title><author>Hu, Liyan ; Diez-Fernandez, Carmen ; Rüfenacht, Véronique ; Hismi, Burcu Öztürk ; Ünal, Özlem ; Soyucen, Erdogan ; Çoker, Mahmut ; Bayraktar, Bilge Tanyeri ; Gunduz, Mehmet ; Kiykim, Ertugrul ; Olgac, Asburce ; Pérez-Tur, Jordi ; Rubio, Vicente ; Häberle, Johannes</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c462t-cebf407cd14dee0311c5e6de9ebd8426ae86d39292672451aa3715d0976115563</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>Animals</topic><topic>Baculovirus</topic><topic>Baculovirus/insect cell expression system</topic><topic>Carbamoyl phosphate synthetase 1 (CPS1) deficiency</topic><topic>Carbamoyl-Phosphate Synthase (Ammonia) - chemistry</topic><topic>Carbamoyl-Phosphate Synthase (Ammonia) - genetics</topic><topic>Carbamoyl-Phosphate Synthase (Ammonia) - metabolism</topic><topic>Carbamoyl-Phosphate Synthase I Deficiency Disease - genetics</topic><topic>Enzyme activity</topic><topic>Enzyme Stability</topic><topic>Female</topic><topic>Founder Effect</topic><topic>Founder mutation</topic><topic>Humans</topic><topic>Infant, Newborn</topic><topic>Male</topic><topic>Protein Structure, Tertiary</topic><topic>Recombinant Fusion Proteins</topic><topic>Sequence Deletion</topic><topic>Sf9 Cells</topic><topic>Spodoptera</topic><topic>Thermostability</topic><topic>Turkey</topic><topic>Urea cycle disorder</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Hu, Liyan</creatorcontrib><creatorcontrib>Diez-Fernandez, Carmen</creatorcontrib><creatorcontrib>Rüfenacht, Véronique</creatorcontrib><creatorcontrib>Hismi, Burcu Öztürk</creatorcontrib><creatorcontrib>Ünal, Özlem</creatorcontrib><creatorcontrib>Soyucen, Erdogan</creatorcontrib><creatorcontrib>Çoker, Mahmut</creatorcontrib><creatorcontrib>Bayraktar, Bilge Tanyeri</creatorcontrib><creatorcontrib>Gunduz, Mehmet</creatorcontrib><creatorcontrib>Kiykim, Ertugrul</creatorcontrib><creatorcontrib>Olgac, Asburce</creatorcontrib><creatorcontrib>Pérez-Tur, Jordi</creatorcontrib><creatorcontrib>Rubio, Vicente</creatorcontrib><creatorcontrib>Häberle, Johannes</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><jtitle>Molecular genetics and metabolism</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Hu, Liyan</au><au>Diez-Fernandez, Carmen</au><au>Rüfenacht, Véronique</au><au>Hismi, Burcu Öztürk</au><au>Ünal, Özlem</au><au>Soyucen, Erdogan</au><au>Çoker, Mahmut</au><au>Bayraktar, Bilge Tanyeri</au><au>Gunduz, Mehmet</au><au>Kiykim, Ertugrul</au><au>Olgac, Asburce</au><au>Pérez-Tur, Jordi</au><au>Rubio, Vicente</au><au>Häberle, Johannes</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Recurrence of carbamoyl phosphate synthetase 1 (CPS1) deficiency in Turkish patients: Characterization of a founder mutation by use of recombinant CPS1 from insect cells expression</atitle><jtitle>Molecular genetics and metabolism</jtitle><addtitle>Mol Genet Metab</addtitle><date>2014-12-01</date><risdate>2014</risdate><volume>113</volume><issue>4</issue><spage>267</spage><epage>273</epage><pages>267-273</pages><issn>1096-7192</issn><eissn>1096-7206</eissn><abstract>Carbamoyl phosphate synthetase 1 (CPS1) deficiency due to CPS1 mutations is a rare autosomal-recessive urea cycle disorder causing hyperammonemia that can lead to death or severe neurological impairment. CPS1 catalyzes carbamoyl phosphate formation from ammonia, bicarbonate and two molecules of ATP, and requires the allosteric activator N-acetyl-L-glutamate. Clinical mutations occur in the entire CPS1 coding region, but mainly in single families, with little recurrence. We characterized here the only currently known recurrent CPS1 mutation, p.Val1013del, found in eleven unrelated patients of Turkish descent using recombinant His-tagged wild type or mutant CPS1 expressed in baculovirus/insect cell system. The global CPS1 reaction and the ATPase and ATP synthesis partial reactions that reflect, respectively, the bicarbonate and the carbamate phosphorylation steps, were assayed. We found that CPS1 wild type and V1013del mutant showed comparable expression levels and purity but the mutant CPS1 exhibited no significant residual activities. In the CPS1 structural model, V1013 belongs to a highly hydrophobic β-strand at the middle of the central β-sheet of the A subdomain of the carbamate phosphorylation domain and is close to the predicted carbamate tunnel that links both phosphorylation sites. Haplotype studies suggested that p.Val1013del is a founder mutation. In conclusion, the mutation p.V1013del inactivates CPS1 but does not render the enzyme grossly unstable or insoluble. Recurrence of this particular mutation in Turkish patients is likely due to a founder effect, which is consistent with the frequent consanguinity observed in the affected population.
•The only known recurrent CPS1 mutation p.Val1013del is studied.•This mutation is close to the predicted carbamate tunnel that links both CPS1 phosphorylation sites.•This mutation was expressed in baculovirus/insect cell system.•The mutant CPS1, while forming a stable protein, exhibited no significant residual activity.•Haplotype studies suggested that p.Val1013del is a founder mutation.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>25410056</pmid><doi>10.1016/j.ymgme.2014.09.014</doi><tpages>7</tpages></addata></record> |
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subjects | Animals Baculovirus Baculovirus/insect cell expression system Carbamoyl phosphate synthetase 1 (CPS1) deficiency Carbamoyl-Phosphate Synthase (Ammonia) - chemistry Carbamoyl-Phosphate Synthase (Ammonia) - genetics Carbamoyl-Phosphate Synthase (Ammonia) - metabolism Carbamoyl-Phosphate Synthase I Deficiency Disease - genetics Enzyme activity Enzyme Stability Female Founder Effect Founder mutation Humans Infant, Newborn Male Protein Structure, Tertiary Recombinant Fusion Proteins Sequence Deletion Sf9 Cells Spodoptera Thermostability Turkey Urea cycle disorder |
title | Recurrence of carbamoyl phosphate synthetase 1 (CPS1) deficiency in Turkish patients: Characterization of a founder mutation by use of recombinant CPS1 from insect cells expression |
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