Recurrence of carbamoyl phosphate synthetase 1 (CPS1) deficiency in Turkish patients: Characterization of a founder mutation by use of recombinant CPS1 from insect cells expression

Carbamoyl phosphate synthetase 1 (CPS1) deficiency due to CPS1 mutations is a rare autosomal-recessive urea cycle disorder causing hyperammonemia that can lead to death or severe neurological impairment. CPS1 catalyzes carbamoyl phosphate formation from ammonia, bicarbonate and two molecules of ATP,...

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Veröffentlicht in:Molecular genetics and metabolism 2014-12, Vol.113 (4), p.267-273
Hauptverfasser: Hu, Liyan, Diez-Fernandez, Carmen, Rüfenacht, Véronique, Hismi, Burcu Öztürk, Ünal, Özlem, Soyucen, Erdogan, Çoker, Mahmut, Bayraktar, Bilge Tanyeri, Gunduz, Mehmet, Kiykim, Ertugrul, Olgac, Asburce, Pérez-Tur, Jordi, Rubio, Vicente, Häberle, Johannes
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container_end_page 273
container_issue 4
container_start_page 267
container_title Molecular genetics and metabolism
container_volume 113
creator Hu, Liyan
Diez-Fernandez, Carmen
Rüfenacht, Véronique
Hismi, Burcu Öztürk
Ünal, Özlem
Soyucen, Erdogan
Çoker, Mahmut
Bayraktar, Bilge Tanyeri
Gunduz, Mehmet
Kiykim, Ertugrul
Olgac, Asburce
Pérez-Tur, Jordi
Rubio, Vicente
Häberle, Johannes
description Carbamoyl phosphate synthetase 1 (CPS1) deficiency due to CPS1 mutations is a rare autosomal-recessive urea cycle disorder causing hyperammonemia that can lead to death or severe neurological impairment. CPS1 catalyzes carbamoyl phosphate formation from ammonia, bicarbonate and two molecules of ATP, and requires the allosteric activator N-acetyl-L-glutamate. Clinical mutations occur in the entire CPS1 coding region, but mainly in single families, with little recurrence. We characterized here the only currently known recurrent CPS1 mutation, p.Val1013del, found in eleven unrelated patients of Turkish descent using recombinant His-tagged wild type or mutant CPS1 expressed in baculovirus/insect cell system. The global CPS1 reaction and the ATPase and ATP synthesis partial reactions that reflect, respectively, the bicarbonate and the carbamate phosphorylation steps, were assayed. We found that CPS1 wild type and V1013del mutant showed comparable expression levels and purity but the mutant CPS1 exhibited no significant residual activities. In the CPS1 structural model, V1013 belongs to a highly hydrophobic β-strand at the middle of the central β-sheet of the A subdomain of the carbamate phosphorylation domain and is close to the predicted carbamate tunnel that links both phosphorylation sites. Haplotype studies suggested that p.Val1013del is a founder mutation. In conclusion, the mutation p.V1013del inactivates CPS1 but does not render the enzyme grossly unstable or insoluble. Recurrence of this particular mutation in Turkish patients is likely due to a founder effect, which is consistent with the frequent consanguinity observed in the affected population. •The only known recurrent CPS1 mutation p.Val1013del is studied.•This mutation is close to the predicted carbamate tunnel that links both CPS1 phosphorylation sites.•This mutation was expressed in baculovirus/insect cell system.•The mutant CPS1, while forming a stable protein, exhibited no significant residual activity.•Haplotype studies suggested that p.Val1013del is a founder mutation.
doi_str_mv 10.1016/j.ymgme.2014.09.014
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CPS1 catalyzes carbamoyl phosphate formation from ammonia, bicarbonate and two molecules of ATP, and requires the allosteric activator N-acetyl-L-glutamate. Clinical mutations occur in the entire CPS1 coding region, but mainly in single families, with little recurrence. We characterized here the only currently known recurrent CPS1 mutation, p.Val1013del, found in eleven unrelated patients of Turkish descent using recombinant His-tagged wild type or mutant CPS1 expressed in baculovirus/insect cell system. The global CPS1 reaction and the ATPase and ATP synthesis partial reactions that reflect, respectively, the bicarbonate and the carbamate phosphorylation steps, were assayed. We found that CPS1 wild type and V1013del mutant showed comparable expression levels and purity but the mutant CPS1 exhibited no significant residual activities. In the CPS1 structural model, V1013 belongs to a highly hydrophobic β-strand at the middle of the central β-sheet of the A subdomain of the carbamate phosphorylation domain and is close to the predicted carbamate tunnel that links both phosphorylation sites. Haplotype studies suggested that p.Val1013del is a founder mutation. In conclusion, the mutation p.V1013del inactivates CPS1 but does not render the enzyme grossly unstable or insoluble. 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In the CPS1 structural model, V1013 belongs to a highly hydrophobic β-strand at the middle of the central β-sheet of the A subdomain of the carbamate phosphorylation domain and is close to the predicted carbamate tunnel that links both phosphorylation sites. Haplotype studies suggested that p.Val1013del is a founder mutation. In conclusion, the mutation p.V1013del inactivates CPS1 but does not render the enzyme grossly unstable or insoluble. Recurrence of this particular mutation in Turkish patients is likely due to a founder effect, which is consistent with the frequent consanguinity observed in the affected population. •The only known recurrent CPS1 mutation p.Val1013del is studied.•This mutation is close to the predicted carbamate tunnel that links both CPS1 phosphorylation sites.•This mutation was expressed in baculovirus/insect cell system.•The mutant CPS1, while forming a stable protein, exhibited no significant residual activity.•Haplotype studies suggested that p.Val1013del is a founder mutation.</description><subject>Animals</subject><subject>Baculovirus</subject><subject>Baculovirus/insect cell expression system</subject><subject>Carbamoyl phosphate synthetase 1 (CPS1) deficiency</subject><subject>Carbamoyl-Phosphate Synthase (Ammonia) - chemistry</subject><subject>Carbamoyl-Phosphate Synthase (Ammonia) - genetics</subject><subject>Carbamoyl-Phosphate Synthase (Ammonia) - metabolism</subject><subject>Carbamoyl-Phosphate Synthase I Deficiency Disease - genetics</subject><subject>Enzyme activity</subject><subject>Enzyme Stability</subject><subject>Female</subject><subject>Founder Effect</subject><subject>Founder mutation</subject><subject>Humans</subject><subject>Infant, Newborn</subject><subject>Male</subject><subject>Protein Structure, Tertiary</subject><subject>Recombinant Fusion Proteins</subject><subject>Sequence Deletion</subject><subject>Sf9 Cells</subject><subject>Spodoptera</subject><subject>Thermostability</subject><subject>Turkey</subject><subject>Urea cycle disorder</subject><issn>1096-7192</issn><issn>1096-7206</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNUctu1DAUjRCIlsIXICEvy2KCb-I4DRKLakQBqRIIytpy7BviYRIHXweRfhcfiDPTskSsjnV1HtY5WfYceA4c5KtdvgzfBswLDiLnTZ7gQXYKvJGbuuDy4f0bmuIke0K04xygasTj7KSoBHBeydPs92c0cwg4GmS-Y0aHVg9-2bOp9zT1OiKjZYw9Rk3IgJ1vP32Bl8xi54xLqoW5kd3M4bujnk06pluk12zb66BNxOBu082Pq7dmnZ9Hi4ENczxe24XNdAgOaPzQulGPka0RrAt-SN6EJjKD-z0x_DUFJEq6p9mjTu8Jn93hWfb16u3N9v3m-uO7D9vL640Rsogbg20neG0sCIvISwBTobTYYGsvRCE1XkhbNkVTyLoQFWhd1lBZ3tQyFVXJ8iw7P_pOwf-YkaIaHK2f0SP6mRRIyQUAF_V_UEtRp9p5majlkWqCJwrYqSm4QYdFAVfrsmqnDsuqdVnFG5UgqV7cBcztgPav5n7KRHhzJGBq5KfDoOiwEFqXyo3KevfPgD91Drfe</recordid><startdate>20141201</startdate><enddate>20141201</enddate><creator>Hu, Liyan</creator><creator>Diez-Fernandez, Carmen</creator><creator>Rüfenacht, Véronique</creator><creator>Hismi, Burcu Öztürk</creator><creator>Ünal, Özlem</creator><creator>Soyucen, Erdogan</creator><creator>Çoker, Mahmut</creator><creator>Bayraktar, Bilge Tanyeri</creator><creator>Gunduz, Mehmet</creator><creator>Kiykim, Ertugrul</creator><creator>Olgac, Asburce</creator><creator>Pérez-Tur, Jordi</creator><creator>Rubio, Vicente</creator><creator>Häberle, Johannes</creator><general>Elsevier Inc</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope></search><sort><creationdate>20141201</creationdate><title>Recurrence of carbamoyl phosphate synthetase 1 (CPS1) deficiency in Turkish patients: Characterization of a founder mutation by use of recombinant CPS1 from insect cells expression</title><author>Hu, Liyan ; 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CPS1 catalyzes carbamoyl phosphate formation from ammonia, bicarbonate and two molecules of ATP, and requires the allosteric activator N-acetyl-L-glutamate. Clinical mutations occur in the entire CPS1 coding region, but mainly in single families, with little recurrence. We characterized here the only currently known recurrent CPS1 mutation, p.Val1013del, found in eleven unrelated patients of Turkish descent using recombinant His-tagged wild type or mutant CPS1 expressed in baculovirus/insect cell system. The global CPS1 reaction and the ATPase and ATP synthesis partial reactions that reflect, respectively, the bicarbonate and the carbamate phosphorylation steps, were assayed. We found that CPS1 wild type and V1013del mutant showed comparable expression levels and purity but the mutant CPS1 exhibited no significant residual activities. In the CPS1 structural model, V1013 belongs to a highly hydrophobic β-strand at the middle of the central β-sheet of the A subdomain of the carbamate phosphorylation domain and is close to the predicted carbamate tunnel that links both phosphorylation sites. Haplotype studies suggested that p.Val1013del is a founder mutation. In conclusion, the mutation p.V1013del inactivates CPS1 but does not render the enzyme grossly unstable or insoluble. Recurrence of this particular mutation in Turkish patients is likely due to a founder effect, which is consistent with the frequent consanguinity observed in the affected population. •The only known recurrent CPS1 mutation p.Val1013del is studied.•This mutation is close to the predicted carbamate tunnel that links both CPS1 phosphorylation sites.•This mutation was expressed in baculovirus/insect cell system.•The mutant CPS1, while forming a stable protein, exhibited no significant residual activity.•Haplotype studies suggested that p.Val1013del is a founder mutation.</abstract><cop>United States</cop><pub>Elsevier Inc</pub><pmid>25410056</pmid><doi>10.1016/j.ymgme.2014.09.014</doi><tpages>7</tpages></addata></record>
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subjects Animals
Baculovirus
Baculovirus/insect cell expression system
Carbamoyl phosphate synthetase 1 (CPS1) deficiency
Carbamoyl-Phosphate Synthase (Ammonia) - chemistry
Carbamoyl-Phosphate Synthase (Ammonia) - genetics
Carbamoyl-Phosphate Synthase (Ammonia) - metabolism
Carbamoyl-Phosphate Synthase I Deficiency Disease - genetics
Enzyme activity
Enzyme Stability
Female
Founder Effect
Founder mutation
Humans
Infant, Newborn
Male
Protein Structure, Tertiary
Recombinant Fusion Proteins
Sequence Deletion
Sf9 Cells
Spodoptera
Thermostability
Turkey
Urea cycle disorder
title Recurrence of carbamoyl phosphate synthetase 1 (CPS1) deficiency in Turkish patients: Characterization of a founder mutation by use of recombinant CPS1 from insect cells expression
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