A study on the taxonomy of soil amoebas from Caspian plague foci based on an analysis of ribosomal operon sequences
The results of a study on the taxonomy and quantitative abundance of free-living amoebas in soil samples from the Russian plague foci of the Northwestern Caspian steppe, the Caspian sand, and the Volga-Ural steppe are presented. Amoebas of the Willaertia and Hartmanella genera, as well as representa...
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| Veröffentlicht in: | Russian journal of genetics 2015, Vol.51 (1), p.33-38 |
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| container_title | Russian journal of genetics |
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| creator | Koshel’, E. I. Anisimova, L. V. Novichkova, L. A. Vidyaeva, N. A. Guseva, N. P. Eroshenko, G. A. Kutyrev, V. V. |
| description | The results of a study on the taxonomy and quantitative abundance of free-living amoebas in soil samples from the Russian plague foci of the Northwestern Caspian steppe, the Caspian sand, and the Volga-Ural steppe are presented. Amoebas of the
Willaertia
and
Hartmanella
genera, as well as representatives of myxomycetes, were isolated from samples. From these, amoebas of the
Acanthamoeba
genus predominated and could be as abundant as 300000 cells per 1 g of soil. Sequencing of the18S rRNA gene region showed that
Acanthamoeba
from the Volga-Ural steppe focus belonged to the
A. castellanii
species. Phylogenetic analysis confirmed that amoebas from two other Caspian foci belonged to the species of
Acanthamoeba
spp. |
| doi_str_mv | 10.1134/S1022795415010056 |
| format | Article |
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Willaertia
and
Hartmanella
genera, as well as representatives of myxomycetes, were isolated from samples. From these, amoebas of the
Acanthamoeba
genus predominated and could be as abundant as 300000 cells per 1 g of soil. Sequencing of the18S rRNA gene region showed that
Acanthamoeba
from the Volga-Ural steppe focus belonged to the
A. castellanii
species. Phylogenetic analysis confirmed that amoebas from two other Caspian foci belonged to the species of
Acanthamoeba
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Willaertia
and
Hartmanella
genera, as well as representatives of myxomycetes, were isolated from samples. From these, amoebas of the
Acanthamoeba
genus predominated and could be as abundant as 300000 cells per 1 g of soil. Sequencing of the18S rRNA gene region showed that
Acanthamoeba
from the Volga-Ural steppe focus belonged to the
A. castellanii
species. Phylogenetic analysis confirmed that amoebas from two other Caspian foci belonged to the species of
Acanthamoeba
spp.</description><subject>Acanthamoeba</subject><subject>Amoeba</subject><subject>Animal Genetics and Genomics</subject><subject>Biomedical and Life Sciences</subject><subject>Biomedicine</subject><subject>Genetics of Microorganisms</subject><subject>Hartmanella</subject><subject>Human Genetics</subject><subject>Microbial Genetics and Genomics</subject><subject>Myxomycetes</subject><issn>1022-7954</issn><issn>1608-3369</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><recordid>eNp9kE9LxDAQxYMouK5-AG85eqlOmjTbHJfFfyB4UM8lm07WLm1TMy24396U9SYIgbzw3m-GPMauBdwKIdXdm4A8X5lCiQIEQKFP2EJoKDMptTlNOtnZ7J-zC6I9zCEtF4zWnMapPvDQ8_ET-Wi_Qx-69PacQtNy2wXcWuI-ho5vLA2N7fnQ2t2E3AfX8GRiPeN2PrY9UEMzHZttoNDZlocBY_IJvybsHdIlO_O2Jbz6vZfs4-H-ffOUvbw-Pm_WL5mTuRizUhqAlTOlrA16o3X62qpIAqxR5ao0pdJGY46lc7rWQqH3W2dUgZDXzjm5ZDfHuUMMaTWNVdeQw7a1PYaJKqE1KDCgdIqKY9TFQBTRV0NsOhsPlYBqLrj6U3Bi8iNDKdvvMFb7MMXUAP0D_QCG-n01</recordid><startdate>2015</startdate><enddate>2015</enddate><creator>Koshel’, E. I.</creator><creator>Anisimova, L. V.</creator><creator>Novichkova, L. A.</creator><creator>Vidyaeva, N. A.</creator><creator>Guseva, N. P.</creator><creator>Eroshenko, G. A.</creator><creator>Kutyrev, V. V.</creator><general>Pleiades Publishing</general><scope>AAYXX</scope><scope>CITATION</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope></search><sort><creationdate>2015</creationdate><title>A study on the taxonomy of soil amoebas from Caspian plague foci based on an analysis of ribosomal operon sequences</title><author>Koshel’, E. I. ; Anisimova, L. V. ; Novichkova, L. A. ; Vidyaeva, N. A. ; Guseva, N. P. ; Eroshenko, G. A. ; Kutyrev, V. V.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c321t-839007c983d9ef96615075f960a94878984696e2e8cc6d614effbc945e02dccc3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>Acanthamoeba</topic><topic>Amoeba</topic><topic>Animal Genetics and Genomics</topic><topic>Biomedical and Life Sciences</topic><topic>Biomedicine</topic><topic>Genetics of Microorganisms</topic><topic>Hartmanella</topic><topic>Human Genetics</topic><topic>Microbial Genetics and Genomics</topic><topic>Myxomycetes</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Koshel’, E. I.</creatorcontrib><creatorcontrib>Anisimova, L. V.</creatorcontrib><creatorcontrib>Novichkova, L. A.</creatorcontrib><creatorcontrib>Vidyaeva, N. A.</creatorcontrib><creatorcontrib>Guseva, N. P.</creatorcontrib><creatorcontrib>Eroshenko, G. A.</creatorcontrib><creatorcontrib>Kutyrev, V. V.</creatorcontrib><collection>CrossRef</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><jtitle>Russian journal of genetics</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Koshel’, E. I.</au><au>Anisimova, L. V.</au><au>Novichkova, L. A.</au><au>Vidyaeva, N. A.</au><au>Guseva, N. P.</au><au>Eroshenko, G. A.</au><au>Kutyrev, V. V.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>A study on the taxonomy of soil amoebas from Caspian plague foci based on an analysis of ribosomal operon sequences</atitle><jtitle>Russian journal of genetics</jtitle><stitle>Russ J Genet</stitle><date>2015</date><risdate>2015</risdate><volume>51</volume><issue>1</issue><spage>33</spage><epage>38</epage><pages>33-38</pages><issn>1022-7954</issn><eissn>1608-3369</eissn><abstract>The results of a study on the taxonomy and quantitative abundance of free-living amoebas in soil samples from the Russian plague foci of the Northwestern Caspian steppe, the Caspian sand, and the Volga-Ural steppe are presented. Amoebas of the
Willaertia
and
Hartmanella
genera, as well as representatives of myxomycetes, were isolated from samples. From these, amoebas of the
Acanthamoeba
genus predominated and could be as abundant as 300000 cells per 1 g of soil. Sequencing of the18S rRNA gene region showed that
Acanthamoeba
from the Volga-Ural steppe focus belonged to the
A. castellanii
species. Phylogenetic analysis confirmed that amoebas from two other Caspian foci belonged to the species of
Acanthamoeba
spp.</abstract><cop>Moscow</cop><pub>Pleiades Publishing</pub><doi>10.1134/S1022795415010056</doi><tpages>6</tpages></addata></record> |
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| language | eng |
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| subjects | Acanthamoeba Amoeba Animal Genetics and Genomics Biomedical and Life Sciences Biomedicine Genetics of Microorganisms Hartmanella Human Genetics Microbial Genetics and Genomics Myxomycetes |
| title | A study on the taxonomy of soil amoebas from Caspian plague foci based on an analysis of ribosomal operon sequences |
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