Rapid phytochemical analysis of birch (Betula) and poplar (Populus) foliage by near-infrared reflectance spectroscopy
Poplar ( Populus ) and birch ( Betula ) species are widely distributed throughout the northern hemisphere, where they are foundation species in forest ecosystems and serve as important sources of pulpwood. The ecology of these species is strongly linked to their foliar chemistry, creating demand for...
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| Veröffentlicht in: | Analytical and bioanalytical chemistry 2013-02, Vol.405 (4), p.1333-1344 |
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| creator | Rubert-Nason, Kennedy F. Holeski, Liza M. Couture, John J. Gusse, Adam Undersander, Daniel J. Lindroth, Richard L. |
| description | Poplar (
Populus
) and birch (
Betula
) species are widely distributed throughout the northern hemisphere, where they are foundation species in forest ecosystems and serve as important sources of pulpwood. The ecology of these species is strongly linked to their foliar chemistry, creating demand for a rapid, inexpensive method to analyze phytochemistry. Our study demonstrates the feasibility of using near-infrared reflectance spectroscopy (NIRS) as an inexpensive, high-throughput tool for determining primary (e.g., nitrogen, sugars, starch) and secondary (e.g., tannins, phenolic glycosides) foliar chemistry of
Populus
and
Betula
species, and identifies conditions necessary for obtaining reliable quantitative data. We developed calibrations with high predictive power (residual predictive deviations ≤ 7.4) by relating phytochemical concentrations determined with classical analytical methods (e.g., spectrophotometric assays, liquid chromatography) to NIR spectra, using modified partial least squares regression. We determine that NIRS, although less sensitive and precise than classical methods for some compounds, provides useful predictions in a much faster, less expensive manner than do classical methods.
Graphical abstract
Near-infrared reflectance spectroscopy with calibrations based on modified partial least squares regression can provide quantitative measurements of foliar nitrogen, carbohydrate, tannin, and phenolic glycoside content in poplar and birch |
| doi_str_mv | 10.1007/s00216-012-6513-6 |
| format | Article |
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Populus
) and birch (
Betula
) species are widely distributed throughout the northern hemisphere, where they are foundation species in forest ecosystems and serve as important sources of pulpwood. The ecology of these species is strongly linked to their foliar chemistry, creating demand for a rapid, inexpensive method to analyze phytochemistry. Our study demonstrates the feasibility of using near-infrared reflectance spectroscopy (NIRS) as an inexpensive, high-throughput tool for determining primary (e.g., nitrogen, sugars, starch) and secondary (e.g., tannins, phenolic glycosides) foliar chemistry of
Populus
and
Betula
species, and identifies conditions necessary for obtaining reliable quantitative data. We developed calibrations with high predictive power (residual predictive deviations ≤ 7.4) by relating phytochemical concentrations determined with classical analytical methods (e.g., spectrophotometric assays, liquid chromatography) to NIR spectra, using modified partial least squares regression. We determine that NIRS, although less sensitive and precise than classical methods for some compounds, provides useful predictions in a much faster, less expensive manner than do classical methods.
Graphical abstract
Near-infrared reflectance spectroscopy with calibrations based on modified partial least squares regression can provide quantitative measurements of foliar nitrogen, carbohydrate, tannin, and phenolic glycoside content in poplar and birch</description><identifier>ISSN: 1618-2642</identifier><identifier>EISSN: 1618-2650</identifier><identifier>DOI: 10.1007/s00216-012-6513-6</identifier><identifier>PMID: 23180073</identifier><language>eng</language><publisher>Berlin/Heidelberg: Springer-Verlag</publisher><subject>Analytical Chemistry ; Betula - chemistry ; Biochemistry ; Calibration ; Characterization and Evaluation of Materials ; Chemistry ; Chemistry and Materials Science ; Data smoothing ; Ecology ; Entomology ; Foliage ; Food Science ; Forest ecosystems ; Forests ; Laboratory Medicine ; Leaves ; Liquid chromatography ; Mathematical analysis ; Methods ; Monitoring/Environmental Analysis ; Nitrogen ; Nitrogen - analysis ; Original Paper ; Phenols ; Phytochemicals ; Plant Extracts - analysis ; Plant Leaves - chemistry ; Poplar ; Populus - chemistry ; Reflectance ; Reflectivity ; Spectroscopy ; Spectroscopy, Near-Infrared - methods ; Starch - analysis ; Tannins - analysis</subject><ispartof>Analytical and bioanalytical chemistry, 2013-02, Vol.405 (4), p.1333-1344</ispartof><rights>Springer-Verlag Berlin Heidelberg 2012</rights><rights>Springer-Verlag Berlin Heidelberg 2013</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c475t-6e8bb093dceb52e2177b4407ba408eeea52e123a82105d0e1138c69cd7b3a9253</citedby><cites>FETCH-LOGICAL-c475t-6e8bb093dceb52e2177b4407ba408eeea52e123a82105d0e1138c69cd7b3a9253</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://link.springer.com/content/pdf/10.1007/s00216-012-6513-6$$EPDF$$P50$$Gspringer$$H</linktopdf><linktohtml>$$Uhttps://link.springer.com/10.1007/s00216-012-6513-6$$EHTML$$P50$$Gspringer$$H</linktohtml><link.rule.ids>314,776,780,27903,27904,41467,42536,51297</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/23180073$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Rubert-Nason, Kennedy F.</creatorcontrib><creatorcontrib>Holeski, Liza M.</creatorcontrib><creatorcontrib>Couture, John J.</creatorcontrib><creatorcontrib>Gusse, Adam</creatorcontrib><creatorcontrib>Undersander, Daniel J.</creatorcontrib><creatorcontrib>Lindroth, Richard L.</creatorcontrib><title>Rapid phytochemical analysis of birch (Betula) and poplar (Populus) foliage by near-infrared reflectance spectroscopy</title><title>Analytical and bioanalytical chemistry</title><addtitle>Anal Bioanal Chem</addtitle><addtitle>Anal Bioanal Chem</addtitle><description>Poplar (
Populus
) and birch (
Betula
) species are widely distributed throughout the northern hemisphere, where they are foundation species in forest ecosystems and serve as important sources of pulpwood. The ecology of these species is strongly linked to their foliar chemistry, creating demand for a rapid, inexpensive method to analyze phytochemistry. Our study demonstrates the feasibility of using near-infrared reflectance spectroscopy (NIRS) as an inexpensive, high-throughput tool for determining primary (e.g., nitrogen, sugars, starch) and secondary (e.g., tannins, phenolic glycosides) foliar chemistry of
Populus
and
Betula
species, and identifies conditions necessary for obtaining reliable quantitative data. We developed calibrations with high predictive power (residual predictive deviations ≤ 7.4) by relating phytochemical concentrations determined with classical analytical methods (e.g., spectrophotometric assays, liquid chromatography) to NIR spectra, using modified partial least squares regression. We determine that NIRS, although less sensitive and precise than classical methods for some compounds, provides useful predictions in a much faster, less expensive manner than do classical methods.
Graphical abstract
Near-infrared reflectance spectroscopy with calibrations based on modified partial least squares regression can provide quantitative measurements of foliar nitrogen, carbohydrate, tannin, and phenolic glycoside content in poplar and birch</description><subject>Analytical Chemistry</subject><subject>Betula - chemistry</subject><subject>Biochemistry</subject><subject>Calibration</subject><subject>Characterization and Evaluation of Materials</subject><subject>Chemistry</subject><subject>Chemistry and Materials Science</subject><subject>Data smoothing</subject><subject>Ecology</subject><subject>Entomology</subject><subject>Foliage</subject><subject>Food Science</subject><subject>Forest ecosystems</subject><subject>Forests</subject><subject>Laboratory Medicine</subject><subject>Leaves</subject><subject>Liquid chromatography</subject><subject>Mathematical analysis</subject><subject>Methods</subject><subject>Monitoring/Environmental Analysis</subject><subject>Nitrogen</subject><subject>Nitrogen - analysis</subject><subject>Original Paper</subject><subject>Phenols</subject><subject>Phytochemicals</subject><subject>Plant Extracts - analysis</subject><subject>Plant Leaves - chemistry</subject><subject>Poplar</subject><subject>Populus - chemistry</subject><subject>Reflectance</subject><subject>Reflectivity</subject><subject>Spectroscopy</subject><subject>Spectroscopy, Near-Infrared - methods</subject><subject>Starch - analysis</subject><subject>Tannins - analysis</subject><issn>1618-2642</issn><issn>1618-2650</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><sourceid>ABUWG</sourceid><sourceid>AFKRA</sourceid><sourceid>AZQEC</sourceid><sourceid>BENPR</sourceid><sourceid>CCPQU</sourceid><sourceid>DWQXO</sourceid><sourceid>GNUQQ</sourceid><recordid>eNqFkUuL1UAQhYMozjj6A9xIg5s7i2hVP5OlDr5gQBFdN51OZW6GvunYnSzy7-3LHQcRZFZVVH11Cs6pqpcIbxDAvM0AHHUNyGutUNT6UXWOGpuaawWP73vJz6pnOd8CoGpQP63OuMCmCIjzav3u5rFn835bot_TYfQuMDe5sOUxsziwbkx-z3bvaVmDuyyrAsc5uMR23-K8hjVfsiGG0d0Q6zY2kUv1OA3JJepZoiGQX9zkieW5dClmH-ftefVkcCHTi7t6Uf38-OHH1ef6-uunL1fvrmsvjVpqTU3XQSt6T53ixNGYTkownZPQEJErQ-TCNRxB9UCIovG69b3phGu5EhfV7qQ7p_hrpbzYw5g9heAmimu2qDWANEbxh1EpWiN5I_BhlBuhlVT6iL7-B72Nayr2Hn8b4Ko1IAuFJ8oXf3Ixzc5pPLi0WQR7TNqekrYlaXtM2upy8-pOee0O1N9f_Im2APwE5LKabij99fq_qr8BYOyyUQ</recordid><startdate>20130201</startdate><enddate>20130201</enddate><creator>Rubert-Nason, Kennedy F.</creator><creator>Holeski, Liza M.</creator><creator>Couture, John J.</creator><creator>Gusse, Adam</creator><creator>Undersander, Daniel J.</creator><creator>Lindroth, Richard L.</creator><general>Springer-Verlag</general><general>Springer Nature B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>3V.</scope><scope>7QF</scope><scope>7QO</scope><scope>7QQ</scope><scope>7SC</scope><scope>7SE</scope><scope>7SP</scope><scope>7SR</scope><scope>7TA</scope><scope>7TB</scope><scope>7U5</scope><scope>7U7</scope><scope>7X7</scope><scope>7XB</scope><scope>88E</scope><scope>8BQ</scope><scope>8FD</scope><scope>8FE</scope><scope>8FG</scope><scope>8FH</scope><scope>8FI</scope><scope>8FJ</scope><scope>8FK</scope><scope>ABJCF</scope><scope>ABUWG</scope><scope>AEUYN</scope><scope>AFKRA</scope><scope>AZQEC</scope><scope>BBNVY</scope><scope>BENPR</scope><scope>BGLVJ</scope><scope>BHPHI</scope><scope>C1K</scope><scope>CCPQU</scope><scope>D1I</scope><scope>DWQXO</scope><scope>F28</scope><scope>FR3</scope><scope>FYUFA</scope><scope>GHDGH</scope><scope>GNUQQ</scope><scope>H8D</scope><scope>H8G</scope><scope>HCIFZ</scope><scope>JG9</scope><scope>JQ2</scope><scope>K9.</scope><scope>KB.</scope><scope>KR7</scope><scope>L7M</scope><scope>LK8</scope><scope>L~C</scope><scope>L~D</scope><scope>M0S</scope><scope>M1P</scope><scope>M7P</scope><scope>P64</scope><scope>PDBOC</scope><scope>PQEST</scope><scope>PQQKQ</scope><scope>PQUKI</scope><scope>7X8</scope><scope>7QH</scope><scope>7UA</scope></search><sort><creationdate>20130201</creationdate><title>Rapid phytochemical analysis of birch (Betula) and poplar (Populus) foliage by near-infrared reflectance spectroscopy</title><author>Rubert-Nason, Kennedy F. ; Holeski, Liza M. ; Couture, John J. ; Gusse, Adam ; Undersander, Daniel J. ; Lindroth, Richard L.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c475t-6e8bb093dceb52e2177b4407ba408eeea52e123a82105d0e1138c69cd7b3a9253</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Analytical Chemistry</topic><topic>Betula - chemistry</topic><topic>Biochemistry</topic><topic>Calibration</topic><topic>Characterization and Evaluation of Materials</topic><topic>Chemistry</topic><topic>Chemistry and Materials Science</topic><topic>Data smoothing</topic><topic>Ecology</topic><topic>Entomology</topic><topic>Foliage</topic><topic>Food Science</topic><topic>Forest ecosystems</topic><topic>Forests</topic><topic>Laboratory Medicine</topic><topic>Leaves</topic><topic>Liquid chromatography</topic><topic>Mathematical analysis</topic><topic>Methods</topic><topic>Monitoring/Environmental Analysis</topic><topic>Nitrogen</topic><topic>Nitrogen - analysis</topic><topic>Original Paper</topic><topic>Phenols</topic><topic>Phytochemicals</topic><topic>Plant Extracts - analysis</topic><topic>Plant Leaves - chemistry</topic><topic>Poplar</topic><topic>Populus - chemistry</topic><topic>Reflectance</topic><topic>Reflectivity</topic><topic>Spectroscopy</topic><topic>Spectroscopy, Near-Infrared - methods</topic><topic>Starch - analysis</topic><topic>Tannins - analysis</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Rubert-Nason, Kennedy F.</creatorcontrib><creatorcontrib>Holeski, Liza M.</creatorcontrib><creatorcontrib>Couture, John J.</creatorcontrib><creatorcontrib>Gusse, Adam</creatorcontrib><creatorcontrib>Undersander, Daniel J.</creatorcontrib><creatorcontrib>Lindroth, Richard L.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>ProQuest Central (Corporate)</collection><collection>Aluminium Industry Abstracts</collection><collection>Biotechnology Research Abstracts</collection><collection>Ceramic Abstracts</collection><collection>Computer and Information Systems Abstracts</collection><collection>Corrosion Abstracts</collection><collection>Electronics & Communications Abstracts</collection><collection>Engineered Materials Abstracts</collection><collection>Materials Business File</collection><collection>Mechanical & Transportation Engineering Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>Toxicology Abstracts</collection><collection>Health & Medical Collection</collection><collection>ProQuest Central (purchase pre-March 2016)</collection><collection>Medical Database (Alumni Edition)</collection><collection>METADEX</collection><collection>Technology Research Database</collection><collection>ProQuest SciTech Collection</collection><collection>ProQuest Technology Collection</collection><collection>ProQuest Natural Science Collection</collection><collection>Hospital Premium Collection</collection><collection>Hospital Premium Collection (Alumni Edition)</collection><collection>ProQuest Central (Alumni) (purchase pre-March 2016)</collection><collection>Materials Science & Engineering Collection</collection><collection>ProQuest Central (Alumni Edition)</collection><collection>ProQuest One Sustainability</collection><collection>ProQuest Central UK/Ireland</collection><collection>ProQuest Central Essentials</collection><collection>Biological Science Collection</collection><collection>ProQuest Central</collection><collection>Technology Collection (ProQuest)</collection><collection>Natural Science Collection (ProQuest)</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ProQuest One Community College</collection><collection>ProQuest Materials Science Collection</collection><collection>ProQuest Central Korea</collection><collection>ANTE: Abstracts in New Technology & Engineering</collection><collection>Engineering Research Database</collection><collection>Health Research Premium Collection</collection><collection>Health Research Premium Collection (Alumni)</collection><collection>ProQuest Central Student</collection><collection>Aerospace Database</collection><collection>Copper Technical Reference Library</collection><collection>SciTech Premium Collection</collection><collection>Materials Research Database</collection><collection>ProQuest Computer Science Collection</collection><collection>ProQuest Health & Medical Complete (Alumni)</collection><collection>Materials Science Database</collection><collection>Civil Engineering Abstracts</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>ProQuest Biological Science Collection</collection><collection>Computer and Information Systems Abstracts Academic</collection><collection>Computer and Information Systems Abstracts Professional</collection><collection>Health & Medical Collection (Alumni Edition)</collection><collection>Medical Database</collection><collection>Biological Science Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Materials Science Collection</collection><collection>ProQuest One Academic Eastern Edition (DO NOT USE)</collection><collection>ProQuest One Academic</collection><collection>ProQuest One Academic UKI Edition</collection><collection>MEDLINE - Academic</collection><collection>Aqualine</collection><collection>Water Resources Abstracts</collection><jtitle>Analytical and bioanalytical chemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Rubert-Nason, Kennedy F.</au><au>Holeski, Liza M.</au><au>Couture, John J.</au><au>Gusse, Adam</au><au>Undersander, Daniel J.</au><au>Lindroth, Richard L.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Rapid phytochemical analysis of birch (Betula) and poplar (Populus) foliage by near-infrared reflectance spectroscopy</atitle><jtitle>Analytical and bioanalytical chemistry</jtitle><stitle>Anal Bioanal Chem</stitle><addtitle>Anal Bioanal Chem</addtitle><date>2013-02-01</date><risdate>2013</risdate><volume>405</volume><issue>4</issue><spage>1333</spage><epage>1344</epage><pages>1333-1344</pages><issn>1618-2642</issn><eissn>1618-2650</eissn><abstract>Poplar (
Populus
) and birch (
Betula
) species are widely distributed throughout the northern hemisphere, where they are foundation species in forest ecosystems and serve as important sources of pulpwood. The ecology of these species is strongly linked to their foliar chemistry, creating demand for a rapid, inexpensive method to analyze phytochemistry. Our study demonstrates the feasibility of using near-infrared reflectance spectroscopy (NIRS) as an inexpensive, high-throughput tool for determining primary (e.g., nitrogen, sugars, starch) and secondary (e.g., tannins, phenolic glycosides) foliar chemistry of
Populus
and
Betula
species, and identifies conditions necessary for obtaining reliable quantitative data. We developed calibrations with high predictive power (residual predictive deviations ≤ 7.4) by relating phytochemical concentrations determined with classical analytical methods (e.g., spectrophotometric assays, liquid chromatography) to NIR spectra, using modified partial least squares regression. We determine that NIRS, although less sensitive and precise than classical methods for some compounds, provides useful predictions in a much faster, less expensive manner than do classical methods.
Graphical abstract
Near-infrared reflectance spectroscopy with calibrations based on modified partial least squares regression can provide quantitative measurements of foliar nitrogen, carbohydrate, tannin, and phenolic glycoside content in poplar and birch</abstract><cop>Berlin/Heidelberg</cop><pub>Springer-Verlag</pub><pmid>23180073</pmid><doi>10.1007/s00216-012-6513-6</doi><tpages>12</tpages></addata></record> |
| fulltext | fulltext |
| identifier | ISSN: 1618-2642 |
| ispartof | Analytical and bioanalytical chemistry, 2013-02, Vol.405 (4), p.1333-1344 |
| issn | 1618-2642 1618-2650 |
| language | eng |
| recordid | cdi_proquest_miscellaneous_1660047752 |
| source | MEDLINE; Springer Nature - Complete Springer Journals |
| subjects | Analytical Chemistry Betula - chemistry Biochemistry Calibration Characterization and Evaluation of Materials Chemistry Chemistry and Materials Science Data smoothing Ecology Entomology Foliage Food Science Forest ecosystems Forests Laboratory Medicine Leaves Liquid chromatography Mathematical analysis Methods Monitoring/Environmental Analysis Nitrogen Nitrogen - analysis Original Paper Phenols Phytochemicals Plant Extracts - analysis Plant Leaves - chemistry Poplar Populus - chemistry Reflectance Reflectivity Spectroscopy Spectroscopy, Near-Infrared - methods Starch - analysis Tannins - analysis |
| title | Rapid phytochemical analysis of birch (Betula) and poplar (Populus) foliage by near-infrared reflectance spectroscopy |
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