Tyr225 in Aspartate Aminotransferase: Contribution of the Hydrogen Bond between Tyr225 and Coenzyme to the Catalytic Reaction

Tyr225 in the active site of Escherichia coli aspartate aminotransferase (AspAT) was replaced by phenylalanine or arginine by site-directed mutagenesis. X-ray crystallo-graphic analysis of Y225F AspAT showed that the benzene ring of Phe225 was situated at the same position as the phenol ring of Tyr2...

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Veröffentlicht in:Journal of biochemistry (Tokyo) 1991-04, Vol.109 (4), p.570-576
Hauptverfasser: Inoue, Katsura, Kuramitsu, Seiki, Okamoto, Akihiro, Hirotsu, Ken, Higuchi, Taiichi, Morino, Yoshimasa, Kagamiyama, Hiroyuki
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container_end_page 576
container_issue 4
container_start_page 570
container_title Journal of biochemistry (Tokyo)
container_volume 109
creator Inoue, Katsura
Kuramitsu, Seiki
Okamoto, Akihiro
Hirotsu, Ken
Higuchi, Taiichi
Morino, Yoshimasa
Kagamiyama, Hiroyuki
description Tyr225 in the active site of Escherichia coli aspartate aminotransferase (AspAT) was replaced by phenylalanine or arginine by site-directed mutagenesis. X-ray crystallo-graphic analysis of Y225F AspAT showed that the benzene ring of Phe225 was situated at the same position as the phenol ring of Tyr225 in wild-type AspAT. The mutations resulted in a great decrease in the rate of the transamination reaction, suggesting that Tyr225 is important for efficient catalysis. The kinetic analysis of half-transamination reactions of Y225F AspAT with four substrates (aspartate, glutamate, oxalacetate, and 2-oxoglutarate) and some analogues (2-methylaspartate, succinate, and glutarate) revealed a considerable increase in the affinities for all these compounds. In contrast, affinity for the amino acid substrates was decreased by mutation to arginine, but affinities for the keto acid substrates and the two dicarboxylates (succinate and glutarate) were increased. The electrostatic interaction between O(3′) of the coenzyme [pyridoxal 5′ -phosphate (PLP)] and the residue at position 225 affected the pKa, value of the Schiff base, which is formed between the ε-amino group of Lys258 and the aldehyde group of PLP; based on the spectrophotometric titration the pKa values were determined to be 6.8 for wild-type AspAT, 8.5 for Y225F AspAT, and 6.1 for Y225R AspAT in the absence of substrate. The absorption spectra of the three AspATs were almost identical in the acidic pH region, but the spectrum of Y225F AspAT differed from that of wild-type or Y225R AspAT in the alkaline pH region. These results suggest that the hydroxyl group of Tyr225 (wild-type AspAT) or the guanidinium group of Arg225 (Y225R AspAT) interacts with O(3′) of PLP in the un-protonated Schiff base, and that these interactions are lost when the Schiff base is protonated.
doi_str_mv 10.1093/oxfordjournals.jbchem.a123421
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X-ray crystallo-graphic analysis of Y225F AspAT showed that the benzene ring of Phe225 was situated at the same position as the phenol ring of Tyr225 in wild-type AspAT. The mutations resulted in a great decrease in the rate of the transamination reaction, suggesting that Tyr225 is important for efficient catalysis. The kinetic analysis of half-transamination reactions of Y225F AspAT with four substrates (aspartate, glutamate, oxalacetate, and 2-oxoglutarate) and some analogues (2-methylaspartate, succinate, and glutarate) revealed a considerable increase in the affinities for all these compounds. In contrast, affinity for the amino acid substrates was decreased by mutation to arginine, but affinities for the keto acid substrates and the two dicarboxylates (succinate and glutarate) were increased. The electrostatic interaction between O(3′) of the coenzyme [pyridoxal 5′ -phosphate (PLP)] and the residue at position 225 affected the pKa, value of the Schiff base, which is formed between the ε-amino group of Lys258 and the aldehyde group of PLP; based on the spectrophotometric titration the pKa values were determined to be 6.8 for wild-type AspAT, 8.5 for Y225F AspAT, and 6.1 for Y225R AspAT in the absence of substrate. The absorption spectra of the three AspATs were almost identical in the acidic pH region, but the spectrum of Y225F AspAT differed from that of wild-type or Y225R AspAT in the alkaline pH region. These results suggest that the hydroxyl group of Tyr225 (wild-type AspAT) or the guanidinium group of Arg225 (Y225R AspAT) interacts with O(3′) of PLP in the un-protonated Schiff base, and that these interactions are lost when the Schiff base is protonated.</description><identifier>ISSN: 0021-924X</identifier><identifier>EISSN: 1756-2651</identifier><identifier>DOI: 10.1093/oxfordjournals.jbchem.a123421</identifier><identifier>PMID: 1869510</identifier><identifier>CODEN: JOBIAO</identifier><language>eng</language><publisher>Oxford: Oxford University Press</publisher><subject>active sites ; Amino Acid Sequence ; Analytical, structural and metabolic biochemistry ; Aspartate Aminotransferases - chemistry ; Aspartate Aminotransferases - genetics ; Aspartate Aminotransferases - metabolism ; aspartate transaminase ; Base Sequence ; Binding Sites ; Biological and medical sciences ; effects on ; Enzymes and enzyme inhibitors ; Escherichia coli ; Escherichia coli - enzymology ; Escherichia coli - genetics ; Fundamental and applied biological sciences. Psychology ; Hydrogen Bonding ; Kinetics ; Models, Molecular ; Molecular Sequence Data ; Mutagenesis, Site-Directed ; Protein Conformation ; Pyridoxal Phosphate - metabolism ; site-directed mutagenesis ; Spectrophotometry ; Transferases ; Tyrosine ; X-ray crystallography ; X-Ray Diffraction</subject><ispartof>Journal of biochemistry (Tokyo), 1991-04, Vol.109 (4), p.570-576</ispartof><rights>1992 INIST-CNRS</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27901,27902</link.rule.ids><backlink>$$Uhttp://pascal-francis.inist.fr/vibad/index.php?action=getRecordDetail&amp;idt=4970812$$DView record in Pascal Francis$$Hfree_for_read</backlink><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/1869510$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Inoue, Katsura</creatorcontrib><creatorcontrib>Kuramitsu, Seiki</creatorcontrib><creatorcontrib>Okamoto, Akihiro</creatorcontrib><creatorcontrib>Hirotsu, Ken</creatorcontrib><creatorcontrib>Higuchi, Taiichi</creatorcontrib><creatorcontrib>Morino, Yoshimasa</creatorcontrib><creatorcontrib>Kagamiyama, Hiroyuki</creatorcontrib><title>Tyr225 in Aspartate Aminotransferase: Contribution of the Hydrogen Bond between Tyr225 and Coenzyme to the Catalytic Reaction</title><title>Journal of biochemistry (Tokyo)</title><addtitle>J Biochem</addtitle><description>Tyr225 in the active site of Escherichia coli aspartate aminotransferase (AspAT) was replaced by phenylalanine or arginine by site-directed mutagenesis. X-ray crystallo-graphic analysis of Y225F AspAT showed that the benzene ring of Phe225 was situated at the same position as the phenol ring of Tyr225 in wild-type AspAT. The mutations resulted in a great decrease in the rate of the transamination reaction, suggesting that Tyr225 is important for efficient catalysis. The kinetic analysis of half-transamination reactions of Y225F AspAT with four substrates (aspartate, glutamate, oxalacetate, and 2-oxoglutarate) and some analogues (2-methylaspartate, succinate, and glutarate) revealed a considerable increase in the affinities for all these compounds. In contrast, affinity for the amino acid substrates was decreased by mutation to arginine, but affinities for the keto acid substrates and the two dicarboxylates (succinate and glutarate) were increased. The electrostatic interaction between O(3′) of the coenzyme [pyridoxal 5′ -phosphate (PLP)] and the residue at position 225 affected the pKa, value of the Schiff base, which is formed between the ε-amino group of Lys258 and the aldehyde group of PLP; based on the spectrophotometric titration the pKa values were determined to be 6.8 for wild-type AspAT, 8.5 for Y225F AspAT, and 6.1 for Y225R AspAT in the absence of substrate. The absorption spectra of the three AspATs were almost identical in the acidic pH region, but the spectrum of Y225F AspAT differed from that of wild-type or Y225R AspAT in the alkaline pH region. These results suggest that the hydroxyl group of Tyr225 (wild-type AspAT) or the guanidinium group of Arg225 (Y225R AspAT) interacts with O(3′) of PLP in the un-protonated Schiff base, and that these interactions are lost when the Schiff base is protonated.</description><subject>active sites</subject><subject>Amino Acid Sequence</subject><subject>Analytical, structural and metabolic biochemistry</subject><subject>Aspartate Aminotransferases - chemistry</subject><subject>Aspartate Aminotransferases - genetics</subject><subject>Aspartate Aminotransferases - metabolism</subject><subject>aspartate transaminase</subject><subject>Base Sequence</subject><subject>Binding Sites</subject><subject>Biological and medical sciences</subject><subject>effects on</subject><subject>Enzymes and enzyme inhibitors</subject><subject>Escherichia coli</subject><subject>Escherichia coli - enzymology</subject><subject>Escherichia coli - genetics</subject><subject>Fundamental and applied biological sciences. Psychology</subject><subject>Hydrogen Bonding</subject><subject>Kinetics</subject><subject>Models, Molecular</subject><subject>Molecular Sequence Data</subject><subject>Mutagenesis, Site-Directed</subject><subject>Protein Conformation</subject><subject>Pyridoxal Phosphate - metabolism</subject><subject>site-directed mutagenesis</subject><subject>Spectrophotometry</subject><subject>Transferases</subject><subject>Tyrosine</subject><subject>X-ray crystallography</subject><subject>X-Ray Diffraction</subject><issn>0021-924X</issn><issn>1756-2651</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1991</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNo9kF-L1DAUxYMo6zj6EYQ8qG8d87dpfBuLOuKCKCssvpS0vXEztsmYpLgV_O523LJPl3PP7x64B6GXlOwo0fx1uLUh9scwRW-GtDu23Q2MO0MZF4w-QBuqZFmwUtKHaEMIo4Vm4voxepLS8SwZ5xfoglallpRs0N-rOTImsfN4n04mZpMB70fnQ47GJwvRJHiD6-BzdO2UXfA4WJxvAB_mPoYf4PHb4HvcQv4Ni1jzzLKqA_g_8wg4h_8HtclmmLPr8Fcw3TnqKXpklyfg2Tq36Nv7d1f1obj8_OFjvb8sHFcqF5wJaltiiRUAvZal6rUlgiuqpWCclmVraMXBsEpa01c9GKX7TmliKyOo5lv06i73FMOvCVJuRpc6GAbjIUypoaXUlRRn8PkKTu0IfXOKbjRxbta-Fv_F6pvUmcEuHXUu3WNCK1ItFW9RcYe5lOH23jbxZ1MqrmRzuP7ecC4-VeJL3dT8H7gKj7Y</recordid><startdate>19910401</startdate><enddate>19910401</enddate><creator>Inoue, Katsura</creator><creator>Kuramitsu, Seiki</creator><creator>Okamoto, Akihiro</creator><creator>Hirotsu, Ken</creator><creator>Higuchi, Taiichi</creator><creator>Morino, Yoshimasa</creator><creator>Kagamiyama, Hiroyuki</creator><general>Oxford University Press</general><scope>BSCLL</scope><scope>IQODW</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>7QL</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>M81</scope><scope>P64</scope></search><sort><creationdate>19910401</creationdate><title>Tyr225 in Aspartate Aminotransferase: Contribution of the Hydrogen Bond between Tyr225 and Coenzyme to the Catalytic Reaction</title><author>Inoue, Katsura ; Kuramitsu, Seiki ; Okamoto, Akihiro ; Hirotsu, Ken ; Higuchi, Taiichi ; Morino, Yoshimasa ; Kagamiyama, Hiroyuki</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-i377t-3241fb0f0f4eed9567d9f0437195423166ba183ea285fad8dea79dc790f8a4193</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1991</creationdate><topic>active sites</topic><topic>Amino Acid Sequence</topic><topic>Analytical, structural and metabolic biochemistry</topic><topic>Aspartate Aminotransferases - chemistry</topic><topic>Aspartate Aminotransferases - genetics</topic><topic>Aspartate Aminotransferases - metabolism</topic><topic>aspartate transaminase</topic><topic>Base Sequence</topic><topic>Binding Sites</topic><topic>Biological and medical sciences</topic><topic>effects on</topic><topic>Enzymes and enzyme inhibitors</topic><topic>Escherichia coli</topic><topic>Escherichia coli - enzymology</topic><topic>Escherichia coli - genetics</topic><topic>Fundamental and applied biological sciences. Psychology</topic><topic>Hydrogen Bonding</topic><topic>Kinetics</topic><topic>Models, Molecular</topic><topic>Molecular Sequence Data</topic><topic>Mutagenesis, Site-Directed</topic><topic>Protein Conformation</topic><topic>Pyridoxal Phosphate - metabolism</topic><topic>site-directed mutagenesis</topic><topic>Spectrophotometry</topic><topic>Transferases</topic><topic>Tyrosine</topic><topic>X-ray crystallography</topic><topic>X-Ray Diffraction</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Inoue, Katsura</creatorcontrib><creatorcontrib>Kuramitsu, Seiki</creatorcontrib><creatorcontrib>Okamoto, Akihiro</creatorcontrib><creatorcontrib>Hirotsu, Ken</creatorcontrib><creatorcontrib>Higuchi, Taiichi</creatorcontrib><creatorcontrib>Morino, Yoshimasa</creatorcontrib><creatorcontrib>Kagamiyama, Hiroyuki</creatorcontrib><collection>Istex</collection><collection>Pascal-Francis</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>Biochemistry Abstracts 3</collection><collection>Biotechnology and BioEngineering Abstracts</collection><jtitle>Journal of biochemistry (Tokyo)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Inoue, Katsura</au><au>Kuramitsu, Seiki</au><au>Okamoto, Akihiro</au><au>Hirotsu, Ken</au><au>Higuchi, Taiichi</au><au>Morino, Yoshimasa</au><au>Kagamiyama, Hiroyuki</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Tyr225 in Aspartate Aminotransferase: Contribution of the Hydrogen Bond between Tyr225 and Coenzyme to the Catalytic Reaction</atitle><jtitle>Journal of biochemistry (Tokyo)</jtitle><addtitle>J Biochem</addtitle><date>1991-04-01</date><risdate>1991</risdate><volume>109</volume><issue>4</issue><spage>570</spage><epage>576</epage><pages>570-576</pages><issn>0021-924X</issn><eissn>1756-2651</eissn><coden>JOBIAO</coden><abstract>Tyr225 in the active site of Escherichia coli aspartate aminotransferase (AspAT) was replaced by phenylalanine or arginine by site-directed mutagenesis. X-ray crystallo-graphic analysis of Y225F AspAT showed that the benzene ring of Phe225 was situated at the same position as the phenol ring of Tyr225 in wild-type AspAT. The mutations resulted in a great decrease in the rate of the transamination reaction, suggesting that Tyr225 is important for efficient catalysis. The kinetic analysis of half-transamination reactions of Y225F AspAT with four substrates (aspartate, glutamate, oxalacetate, and 2-oxoglutarate) and some analogues (2-methylaspartate, succinate, and glutarate) revealed a considerable increase in the affinities for all these compounds. In contrast, affinity for the amino acid substrates was decreased by mutation to arginine, but affinities for the keto acid substrates and the two dicarboxylates (succinate and glutarate) were increased. The electrostatic interaction between O(3′) of the coenzyme [pyridoxal 5′ -phosphate (PLP)] and the residue at position 225 affected the pKa, value of the Schiff base, which is formed between the ε-amino group of Lys258 and the aldehyde group of PLP; based on the spectrophotometric titration the pKa values were determined to be 6.8 for wild-type AspAT, 8.5 for Y225F AspAT, and 6.1 for Y225R AspAT in the absence of substrate. The absorption spectra of the three AspATs were almost identical in the acidic pH region, but the spectrum of Y225F AspAT differed from that of wild-type or Y225R AspAT in the alkaline pH region. These results suggest that the hydroxyl group of Tyr225 (wild-type AspAT) or the guanidinium group of Arg225 (Y225R AspAT) interacts with O(3′) of PLP in the un-protonated Schiff base, and that these interactions are lost when the Schiff base is protonated.</abstract><cop>Oxford</cop><pub>Oxford University Press</pub><pmid>1869510</pmid><doi>10.1093/oxfordjournals.jbchem.a123421</doi><tpages>7</tpages></addata></record>
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subjects active sites
Amino Acid Sequence
Analytical, structural and metabolic biochemistry
Aspartate Aminotransferases - chemistry
Aspartate Aminotransferases - genetics
Aspartate Aminotransferases - metabolism
aspartate transaminase
Base Sequence
Binding Sites
Biological and medical sciences
effects on
Enzymes and enzyme inhibitors
Escherichia coli
Escherichia coli - enzymology
Escherichia coli - genetics
Fundamental and applied biological sciences. Psychology
Hydrogen Bonding
Kinetics
Models, Molecular
Molecular Sequence Data
Mutagenesis, Site-Directed
Protein Conformation
Pyridoxal Phosphate - metabolism
site-directed mutagenesis
Spectrophotometry
Transferases
Tyrosine
X-ray crystallography
X-Ray Diffraction
title Tyr225 in Aspartate Aminotransferase: Contribution of the Hydrogen Bond between Tyr225 and Coenzyme to the Catalytic Reaction
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