Regulation of Ich-1 Pre-MRNA Alternative Splicing and Apoptosis by Mammalian Splicing Factors
The importance of alternative splicing in regulating apoptosis has been suggested by findings of functionally antagonistic proteins generated by alternative splicing of several genes involved in apoptosis. Among these, Ich-1 (also named as caspase-2) encodes a member of the caspase family of proteas...
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Veröffentlicht in: | Proceedings of the National Academy of Sciences - PNAS 1998-08, Vol.95 (16), p.9155-9160 |
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description | The importance of alternative splicing in regulating apoptosis has been suggested by findings of functionally antagonistic proteins generated by alternative splicing of several genes involved in apoptosis. Among these, Ich-1 (also named as caspase-2) encodes a member of the caspase family of proteases. Two forms of Ich-1 are produced as a result of alternative splicing: Ich-1L, which causes apoptosis, and Ich-1S, which prevents apoptosis. The precise nature of Ich-1 alternative splicing and its regulation remain unknown. Here, we show that the production of Ich-1L and Ich-1S transcripts results from alternative exclusion or inclusion of a 61-bp exon. Several splicing factors can regulate Ich-1 splicing. Serine-arginine-rich proteins SC35 and ASF/SF2 promote exon skipping, decreasing the ratio of Ich-1S to Ich-1L transcripts; whereas heterogeneous nuclear ribonucleoprotein A1 facilitates exon inclusion, increasing this ratio. Furthermore, in cultured cells, SC35 overexpression increases apoptosis; whereas heterogeneous nuclear ribonucleoprotein A1 overexpression decreases apoptosis. These results provide the first direct evidence that splicing factors can regulate Ich-1 alternative splicing and suggest that alternative splicing may be an important regulatory mechanism for apoptosis. |
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Among these, Ich-1 (also named as caspase-2) encodes a member of the caspase family of proteases. Two forms of Ich-1 are produced as a result of alternative splicing: Ich-1L, which causes apoptosis, and Ich-1S, which prevents apoptosis. The precise nature of Ich-1 alternative splicing and its regulation remain unknown. Here, we show that the production of Ich-1L and Ich-1S transcripts results from alternative exclusion or inclusion of a 61-bp exon. Several splicing factors can regulate Ich-1 splicing. Serine-arginine-rich proteins SC35 and ASF/SF2 promote exon skipping, decreasing the ratio of Ich-1S to Ich-1L transcripts; whereas heterogeneous nuclear ribonucleoprotein A1 facilitates exon inclusion, increasing this ratio. Furthermore, in cultured cells, SC35 overexpression increases apoptosis; whereas heterogeneous nuclear ribonucleoprotein A1 overexpression decreases apoptosis. These results provide the first direct evidence that splicing factors can regulate Ich-1 alternative splicing and suggest that alternative splicing may be an important regulatory mechanism for apoptosis.</description><identifier>ISSN: 0027-8424</identifier><identifier>EISSN: 1091-6490</identifier><identifier>DOI: 10.1073/pnas.95.16.9155</identifier><identifier>PMID: 9689050</identifier><language>eng</language><publisher>United States: National Academy of Sciences of the United States of America</publisher><subject>Alternative Splicing ; Animals ; Apoptosis ; Arginine - metabolism ; Base Sequence ; Biochemistry ; Biological Sciences ; Caspase 2 ; Caspases ; Cell Line ; Cell nucleus ; Cells ; DNA, Complementary ; Exons ; Gene expression regulation ; Genes ; HeLa cells ; Heterogeneous Nuclear Ribonucleoprotein A1 ; Heterogeneous nuclear ribonucleoproteins ; Heterogeneous-Nuclear Ribonucleoprotein Group A-B ; Humans ; Mice ; Molecular biology ; Molecular Sequence Data ; Plasmids ; Proteins ; Proteins - genetics ; Ribonucleoproteins - genetics ; RNA Precursors - genetics ; RNA, Messenger - genetics ; Sequence Homology, Nucleic Acid ; Serine - metabolism ; Splicing ; Transfection</subject><ispartof>Proceedings of the National Academy of Sciences - PNAS, 1998-08, Vol.95 (16), p.9155-9160</ispartof><rights>Copyright 1993-1998 National Academy of Sciences</rights><rights>Copyright National Academy of Sciences Aug 4, 1998</rights><rights>Copyright © 1998, The National Academy of Sciences 1998</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c518t-5e914619f278bfa317c826b10d5efe0406d1c7e5ad0d79d8acc7b577725695d83</citedby><cites>FETCH-LOGICAL-c518t-5e914619f278bfa317c826b10d5efe0406d1c7e5ad0d79d8acc7b577725695d83</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Uhttp://www.pnas.org/content/95/16.cover.gif</thumbnail><linktopdf>$$Uhttps://www.jstor.org/stable/pdf/45444$$EPDF$$P50$$Gjstor$$H</linktopdf><linktohtml>$$Uhttps://www.jstor.org/stable/45444$$EHTML$$P50$$Gjstor$$H</linktohtml><link.rule.ids>230,314,727,780,784,803,885,27924,27925,53791,53793,58017,58250</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/9689050$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Jiang, Zhi-Hong</creatorcontrib><creatorcontrib>Zhang, Wan-Jiang</creatorcontrib><creatorcontrib>Rao, Yi</creatorcontrib><creatorcontrib>Wu, Jane Y.</creatorcontrib><title>Regulation of Ich-1 Pre-MRNA Alternative Splicing and Apoptosis by Mammalian Splicing Factors</title><title>Proceedings of the National Academy of Sciences - PNAS</title><addtitle>Proc Natl Acad Sci U S A</addtitle><description>The importance of alternative splicing in regulating apoptosis has been suggested by findings of functionally antagonistic proteins generated by alternative splicing of several genes involved in apoptosis. Among these, Ich-1 (also named as caspase-2) encodes a member of the caspase family of proteases. Two forms of Ich-1 are produced as a result of alternative splicing: Ich-1L, which causes apoptosis, and Ich-1S, which prevents apoptosis. The precise nature of Ich-1 alternative splicing and its regulation remain unknown. Here, we show that the production of Ich-1L and Ich-1S transcripts results from alternative exclusion or inclusion of a 61-bp exon. Several splicing factors can regulate Ich-1 splicing. Serine-arginine-rich proteins SC35 and ASF/SF2 promote exon skipping, decreasing the ratio of Ich-1S to Ich-1L transcripts; whereas heterogeneous nuclear ribonucleoprotein A1 facilitates exon inclusion, increasing this ratio. Furthermore, in cultured cells, SC35 overexpression increases apoptosis; whereas heterogeneous nuclear ribonucleoprotein A1 overexpression decreases apoptosis. These results provide the first direct evidence that splicing factors can regulate Ich-1 alternative splicing and suggest that alternative splicing may be an important regulatory mechanism for apoptosis.</description><subject>Alternative Splicing</subject><subject>Animals</subject><subject>Apoptosis</subject><subject>Arginine - metabolism</subject><subject>Base Sequence</subject><subject>Biochemistry</subject><subject>Biological Sciences</subject><subject>Caspase 2</subject><subject>Caspases</subject><subject>Cell Line</subject><subject>Cell nucleus</subject><subject>Cells</subject><subject>DNA, Complementary</subject><subject>Exons</subject><subject>Gene expression regulation</subject><subject>Genes</subject><subject>HeLa cells</subject><subject>Heterogeneous Nuclear Ribonucleoprotein A1</subject><subject>Heterogeneous nuclear ribonucleoproteins</subject><subject>Heterogeneous-Nuclear Ribonucleoprotein Group A-B</subject><subject>Humans</subject><subject>Mice</subject><subject>Molecular biology</subject><subject>Molecular Sequence Data</subject><subject>Plasmids</subject><subject>Proteins</subject><subject>Proteins - genetics</subject><subject>Ribonucleoproteins - genetics</subject><subject>RNA Precursors - genetics</subject><subject>RNA, Messenger - genetics</subject><subject>Sequence Homology, Nucleic Acid</subject><subject>Serine - metabolism</subject><subject>Splicing</subject><subject>Transfection</subject><issn>0027-8424</issn><issn>1091-6490</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1998</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqFkU1v1DAURS0EKkNhjYQEiljAKtP3HDu2JTajqoVKLaACS2Q5jjPNyIlDnFTtvyfRjMLHAlZe3HOvbB9CniOsEUR20rUmrhVfY75WyPkDskJQmOZMwUOyAqAilYyyx-RJjDsAUFzCETlSuVTAYUW-X7vt6M1QhzYJVXJhb1JMPvcuvbr-uEk2fnB9O6W3LvnS-drW7TYxbZlsutANIdYxKe6TK9M0xtem_cWcGzuEPj4ljyrjo3t2OI_Jt_Ozr6cf0stP7y9ON5ep5SiHlDuFLEdVUSGLymQorKR5gVByVzlgkJdoheOmhFKoUhprRcGFEJTnipcyOybv9rvdWDSutK4deuN119eN6e91MLX-M2nrG70Nt5piBnP9zaHehx-ji4Nu6mid96Z1YYxaAjAOVP0XxJxzRDkvvv4L3IVx-kkfNQXMqKQ4Qyd7yPYhxt5Vy4UR9GxXz3a14tOunu1OjZe_v3PhDzqn_O0hn4tLugzoavST0rthIl_9k5yAF3tgFyeTC8E4Yyz7CUt1wWM</recordid><startdate>19980804</startdate><enddate>19980804</enddate><creator>Jiang, Zhi-Hong</creator><creator>Zhang, Wan-Jiang</creator><creator>Rao, Yi</creator><creator>Wu, Jane Y.</creator><general>National Academy of Sciences of the United States of America</general><general>National Acad Sciences</general><general>National Academy of Sciences</general><general>The National Academy of Sciences</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QG</scope><scope>7QL</scope><scope>7QP</scope><scope>7QR</scope><scope>7SN</scope><scope>7SS</scope><scope>7T5</scope><scope>7TK</scope><scope>7TM</scope><scope>7TO</scope><scope>7U9</scope><scope>8FD</scope><scope>C1K</scope><scope>FR3</scope><scope>H94</scope><scope>M7N</scope><scope>P64</scope><scope>RC3</scope><scope>7X8</scope><scope>5PM</scope></search><sort><creationdate>19980804</creationdate><title>Regulation of Ich-1 Pre-MRNA Alternative Splicing and Apoptosis by Mammalian Splicing Factors</title><author>Jiang, Zhi-Hong ; Zhang, Wan-Jiang ; Rao, Yi ; Wu, Jane Y.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c518t-5e914619f278bfa317c826b10d5efe0406d1c7e5ad0d79d8acc7b577725695d83</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1998</creationdate><topic>Alternative Splicing</topic><topic>Animals</topic><topic>Apoptosis</topic><topic>Arginine - metabolism</topic><topic>Base Sequence</topic><topic>Biochemistry</topic><topic>Biological Sciences</topic><topic>Caspase 2</topic><topic>Caspases</topic><topic>Cell Line</topic><topic>Cell nucleus</topic><topic>Cells</topic><topic>DNA, Complementary</topic><topic>Exons</topic><topic>Gene expression regulation</topic><topic>Genes</topic><topic>HeLa cells</topic><topic>Heterogeneous Nuclear Ribonucleoprotein A1</topic><topic>Heterogeneous nuclear ribonucleoproteins</topic><topic>Heterogeneous-Nuclear Ribonucleoprotein Group A-B</topic><topic>Humans</topic><topic>Mice</topic><topic>Molecular biology</topic><topic>Molecular Sequence Data</topic><topic>Plasmids</topic><topic>Proteins</topic><topic>Proteins - genetics</topic><topic>Ribonucleoproteins - genetics</topic><topic>RNA Precursors - genetics</topic><topic>RNA, Messenger - genetics</topic><topic>Sequence Homology, Nucleic Acid</topic><topic>Serine - metabolism</topic><topic>Splicing</topic><topic>Transfection</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Jiang, Zhi-Hong</creatorcontrib><creatorcontrib>Zhang, Wan-Jiang</creatorcontrib><creatorcontrib>Rao, Yi</creatorcontrib><creatorcontrib>Wu, Jane Y.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Animal Behavior Abstracts</collection><collection>Bacteriology Abstracts (Microbiology B)</collection><collection>Calcium & Calcified Tissue Abstracts</collection><collection>Chemoreception Abstracts</collection><collection>Ecology Abstracts</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Immunology Abstracts</collection><collection>Neurosciences Abstracts</collection><collection>Nucleic Acids Abstracts</collection><collection>Oncogenes and Growth Factors Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>Algology Mycology and Protozoology Abstracts (Microbiology C)</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>MEDLINE - Academic</collection><collection>PubMed Central (Full Participant titles)</collection><jtitle>Proceedings of the National Academy of Sciences - PNAS</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Jiang, Zhi-Hong</au><au>Zhang, Wan-Jiang</au><au>Rao, Yi</au><au>Wu, Jane Y.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Regulation of Ich-1 Pre-MRNA Alternative Splicing and Apoptosis by Mammalian Splicing Factors</atitle><jtitle>Proceedings of the National Academy of Sciences - PNAS</jtitle><addtitle>Proc Natl Acad Sci U S A</addtitle><date>1998-08-04</date><risdate>1998</risdate><volume>95</volume><issue>16</issue><spage>9155</spage><epage>9160</epage><pages>9155-9160</pages><issn>0027-8424</issn><eissn>1091-6490</eissn><abstract>The importance of alternative splicing in regulating apoptosis has been suggested by findings of functionally antagonistic proteins generated by alternative splicing of several genes involved in apoptosis. Among these, Ich-1 (also named as caspase-2) encodes a member of the caspase family of proteases. Two forms of Ich-1 are produced as a result of alternative splicing: Ich-1L, which causes apoptosis, and Ich-1S, which prevents apoptosis. The precise nature of Ich-1 alternative splicing and its regulation remain unknown. Here, we show that the production of Ich-1L and Ich-1S transcripts results from alternative exclusion or inclusion of a 61-bp exon. Several splicing factors can regulate Ich-1 splicing. Serine-arginine-rich proteins SC35 and ASF/SF2 promote exon skipping, decreasing the ratio of Ich-1S to Ich-1L transcripts; whereas heterogeneous nuclear ribonucleoprotein A1 facilitates exon inclusion, increasing this ratio. Furthermore, in cultured cells, SC35 overexpression increases apoptosis; whereas heterogeneous nuclear ribonucleoprotein A1 overexpression decreases apoptosis. These results provide the first direct evidence that splicing factors can regulate Ich-1 alternative splicing and suggest that alternative splicing may be an important regulatory mechanism for apoptosis.</abstract><cop>United States</cop><pub>National Academy of Sciences of the United States of America</pub><pmid>9689050</pmid><doi>10.1073/pnas.95.16.9155</doi><tpages>6</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Alternative Splicing Animals Apoptosis Arginine - metabolism Base Sequence Biochemistry Biological Sciences Caspase 2 Caspases Cell Line Cell nucleus Cells DNA, Complementary Exons Gene expression regulation Genes HeLa cells Heterogeneous Nuclear Ribonucleoprotein A1 Heterogeneous nuclear ribonucleoproteins Heterogeneous-Nuclear Ribonucleoprotein Group A-B Humans Mice Molecular biology Molecular Sequence Data Plasmids Proteins Proteins - genetics Ribonucleoproteins - genetics RNA Precursors - genetics RNA, Messenger - genetics Sequence Homology, Nucleic Acid Serine - metabolism Splicing Transfection |
title | Regulation of Ich-1 Pre-MRNA Alternative Splicing and Apoptosis by Mammalian Splicing Factors |
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