Polymerase chain reaction (PCR) amplification of DNA of red sea bream [Pagrus major] iridovirus (RSIV)
The polymerase chain reaction (PCR) was used to amplify DNA of the red sea bream iridovirus (RSIV). Four oligonucleotide primer sets based on the ATPase gene, DNA polymerase gene, and a Pst I-restriction fragment of RSIV genomic DNA were synthesized. PCR products of the expected size were amplified...
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Veröffentlicht in: | Fish Pathology 1998/03/15, Vol.33(1), pp.17-23 |
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creator | Kurita, J. (Nansei National Fisheries Research Inst., Ono, Hiroshima (Japan)) Nakajima, K Hirono, I Aoki, T |
description | The polymerase chain reaction (PCR) was used to amplify DNA of the red sea bream iridovirus (RSIV). Four oligonucleotide primer sets based on the ATPase gene, DNA polymerase gene, and a Pst I-restriction fragment of RSIV genomic DNA were synthesized. PCR products of the expected size were amplified with each primer set after 30 cycles using template DNA which was extracted from the supernatant of tissue-cultured GF cells infected with RSIV. These amplified products were shown to be specific for the genomic DNA of RSIV by Southern blot hybridization. In addition, PCR products were obtained from the DNAs of the spleen and blood of red sea bream, Pagrus major, artificially infected with RSIV. Furthermore, the PCR products were detected from the tissues of cultured marine fish naturally infected with RSIV and from the supernatant of tissue-cultured GF cells infected with RSIV isolated from cultured marine fish. However, PCR products were not obtained at 3 months post-challenge from the spleens of red sea bream infected by intraperitoneal inoculation of RSIV. None of the PCR products were obtained from the supernatant of tissue-cultured FHM cells infected with frog virus 3 or from the lymphocystis tissue of Japanese flounder, Paralichthys olivaceus, infected with fish lymphocystis disease virus. |
doi_str_mv | 10.3147/jsfp.33.17 |
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(Nansei National Fisheries Research Inst., Ono, Hiroshima (Japan)) ; Nakajima, K ; Hirono, I ; Aoki, T</creator><creatorcontrib>Kurita, J. (Nansei National Fisheries Research Inst., Ono, Hiroshima (Japan)) ; Nakajima, K ; Hirono, I ; Aoki, T</creatorcontrib><description>The polymerase chain reaction (PCR) was used to amplify DNA of the red sea bream iridovirus (RSIV). Four oligonucleotide primer sets based on the ATPase gene, DNA polymerase gene, and a Pst I-restriction fragment of RSIV genomic DNA were synthesized. PCR products of the expected size were amplified with each primer set after 30 cycles using template DNA which was extracted from the supernatant of tissue-cultured GF cells infected with RSIV. These amplified products were shown to be specific for the genomic DNA of RSIV by Southern blot hybridization. In addition, PCR products were obtained from the DNAs of the spleen and blood of red sea bream, Pagrus major, artificially infected with RSIV. Furthermore, the PCR products were detected from the tissues of cultured marine fish naturally infected with RSIV and from the supernatant of tissue-cultured GF cells infected with RSIV isolated from cultured marine fish. However, PCR products were not obtained at 3 months post-challenge from the spleens of red sea bream infected by intraperitoneal inoculation of RSIV. None of the PCR products were obtained from the supernatant of tissue-cultured FHM cells infected with frog virus 3 or from the lymphocystis tissue of Japanese flounder, Paralichthys olivaceus, infected with fish lymphocystis disease virus.</description><identifier>ISSN: 0388-788X</identifier><identifier>EISSN: 1881-7335</identifier><identifier>DOI: 10.3147/jsfp.33.17</identifier><language>eng</language><publisher>The Japanese Society of Fish Pathology</publisher><subject>DIAGNOSIS ; DIAGNOSTIC ; DIAGNOSTICO ; IRIDOVIRIDAE ; Iridovirus ; Marine ; PAGRUS ; Pagrus major ; Paralichthys olivaceus ; PCR ; rapid diagnosis ; red sea bream ; red sea bream iridovirus ; RSIV</subject><ispartof>Fish Pathology, 1998/03/15, Vol.33(1), pp.17-23</ispartof><rights>The Japanese Society of Fish Pathology</rights><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c403t-d2c34d94a4a8ddab380d30b8162fc5ef25ab6a4bb97e3b1e3836a2847f63dacc3</citedby><cites>FETCH-LOGICAL-c403t-d2c34d94a4a8ddab380d30b8162fc5ef25ab6a4bb97e3b1e3836a2847f63dacc3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><link.rule.ids>314,776,780,27901,27902</link.rule.ids></links><search><creatorcontrib>Kurita, J. (Nansei National Fisheries Research Inst., Ono, Hiroshima (Japan))</creatorcontrib><creatorcontrib>Nakajima, K</creatorcontrib><creatorcontrib>Hirono, I</creatorcontrib><creatorcontrib>Aoki, T</creatorcontrib><title>Polymerase chain reaction (PCR) amplification of DNA of red sea bream [Pagrus major] iridovirus (RSIV)</title><title>Fish Pathology</title><addtitle>Fish Pathol.</addtitle><description>The polymerase chain reaction (PCR) was used to amplify DNA of the red sea bream iridovirus (RSIV). Four oligonucleotide primer sets based on the ATPase gene, DNA polymerase gene, and a Pst I-restriction fragment of RSIV genomic DNA were synthesized. PCR products of the expected size were amplified with each primer set after 30 cycles using template DNA which was extracted from the supernatant of tissue-cultured GF cells infected with RSIV. These amplified products were shown to be specific for the genomic DNA of RSIV by Southern blot hybridization. In addition, PCR products were obtained from the DNAs of the spleen and blood of red sea bream, Pagrus major, artificially infected with RSIV. Furthermore, the PCR products were detected from the tissues of cultured marine fish naturally infected with RSIV and from the supernatant of tissue-cultured GF cells infected with RSIV isolated from cultured marine fish. However, PCR products were not obtained at 3 months post-challenge from the spleens of red sea bream infected by intraperitoneal inoculation of RSIV. None of the PCR products were obtained from the supernatant of tissue-cultured FHM cells infected with frog virus 3 or from the lymphocystis tissue of Japanese flounder, Paralichthys olivaceus, infected with fish lymphocystis disease virus.</description><subject>DIAGNOSIS</subject><subject>DIAGNOSTIC</subject><subject>DIAGNOSTICO</subject><subject>IRIDOVIRIDAE</subject><subject>Iridovirus</subject><subject>Marine</subject><subject>PAGRUS</subject><subject>Pagrus major</subject><subject>Paralichthys olivaceus</subject><subject>PCR</subject><subject>rapid diagnosis</subject><subject>red sea bream</subject><subject>red sea bream iridovirus</subject><subject>RSIV</subject><issn>0388-788X</issn><issn>1881-7335</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1998</creationdate><recordtype>article</recordtype><recordid>eNo9kVtLxDAQhYMouF5efBfyJCp0TTq9pI-y3hFdvCGIhGmaaJZ2syZdwX9vuxVf5sCZjwNzhpA9zsbAk_xkFsxiDDDm-RoZcSF4lAOk62TEQIgoF-J1k2yFMGMszYDBiJipq38a7TFoqj7RzqnXqFrr5vRwOnk4otgsamuswpXnDD27O-3F64oGjbTs-Ia-TfHDLwNtcOb8O7XeVu7b9s7hw-P1y9EO2TBYB737p9vk-eL8aXIV3d5fXk9ObyOVMGijKlaQVEWCCYqqwhIEq4CVgmexUak2cYplhklZFrmGkmsQkGEsktxkUKFSsE0OhtyFd19LHVrZ2KB0XeNcu2WQPEvT7vS8A48HUHkXgtdGLrxt0P9IzmRfpeyrlACS9_BkgGehxQ_9j6Jvrar1CuVFlq3wYfD8f9vV6qWedyn7Q4pBJ7u6bJA3U14UonsGj2P4BbvyiFs</recordid><startdate>19980301</startdate><enddate>19980301</enddate><creator>Kurita, J. 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(Nansei National Fisheries Research Inst., Ono, Hiroshima (Japan))</creatorcontrib><creatorcontrib>Nakajima, K</creatorcontrib><creatorcontrib>Hirono, I</creatorcontrib><creatorcontrib>Aoki, T</creatorcontrib><collection>AGRIS</collection><collection>CrossRef</collection><collection>Oceanic Abstracts</collection><collection>Virology and AIDS Abstracts</collection><collection>Technology Research Database</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Engineering Research Database</collection><collection>AIDS and Cancer Research Abstracts</collection><collection>ASFA: Marine Biotechnology Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Marine Biotechnology Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>Biotechnology and BioEngineering Abstracts</collection><jtitle>Fish Pathology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Kurita, J. (Nansei National Fisheries Research Inst., Ono, Hiroshima (Japan))</au><au>Nakajima, K</au><au>Hirono, I</au><au>Aoki, T</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Polymerase chain reaction (PCR) amplification of DNA of red sea bream [Pagrus major] iridovirus (RSIV)</atitle><jtitle>Fish Pathology</jtitle><addtitle>Fish Pathol.</addtitle><date>1998-03-01</date><risdate>1998</risdate><volume>33</volume><issue>1</issue><spage>17</spage><epage>23</epage><pages>17-23</pages><issn>0388-788X</issn><eissn>1881-7335</eissn><abstract>The polymerase chain reaction (PCR) was used to amplify DNA of the red sea bream iridovirus (RSIV). Four oligonucleotide primer sets based on the ATPase gene, DNA polymerase gene, and a Pst I-restriction fragment of RSIV genomic DNA were synthesized. PCR products of the expected size were amplified with each primer set after 30 cycles using template DNA which was extracted from the supernatant of tissue-cultured GF cells infected with RSIV. These amplified products were shown to be specific for the genomic DNA of RSIV by Southern blot hybridization. In addition, PCR products were obtained from the DNAs of the spleen and blood of red sea bream, Pagrus major, artificially infected with RSIV. Furthermore, the PCR products were detected from the tissues of cultured marine fish naturally infected with RSIV and from the supernatant of tissue-cultured GF cells infected with RSIV isolated from cultured marine fish. However, PCR products were not obtained at 3 months post-challenge from the spleens of red sea bream infected by intraperitoneal inoculation of RSIV. None of the PCR products were obtained from the supernatant of tissue-cultured FHM cells infected with frog virus 3 or from the lymphocystis tissue of Japanese flounder, Paralichthys olivaceus, infected with fish lymphocystis disease virus.</abstract><pub>The Japanese Society of Fish Pathology</pub><doi>10.3147/jsfp.33.17</doi><tpages>7</tpages><oa>free_for_read</oa></addata></record> |
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subjects | DIAGNOSIS DIAGNOSTIC DIAGNOSTICO IRIDOVIRIDAE Iridovirus Marine PAGRUS Pagrus major Paralichthys olivaceus PCR rapid diagnosis red sea bream red sea bream iridovirus RSIV |
title | Polymerase chain reaction (PCR) amplification of DNA of red sea bream [Pagrus major] iridovirus (RSIV) |
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