The influence of XRCC1 genetic variants on lung cancer susceptibility in Chinese Han population
Growing evidence suggests that genetic variants of X-ray repair cross-complementing group 1 proteins (XRCC1) contribute to genetic effects on the development of lung cancer. This case–control study aims to evaluate the genetic effects of XRCC1 c.482C>T and c.1686C>G single nucleotide polymorph...
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description | Growing evidence suggests that genetic variants of X-ray repair cross-complementing group 1 proteins (XRCC1) contribute to genetic effects on the development of lung cancer. This case–control study aims to evaluate the genetic effects of XRCC1 c.482C>T and c.1686C>G single nucleotide polymorphisms (SNPs) on lung cancer susceptibility. 391 lung cancer patients and 398 cancer-free controls were enrolled in this study. The genotypes of c.482C>T and c.1686C>G genetic variants were detected by the created restriction site-polymerase chain reaction (CRS-PCR), PCR-restriction fragment length polymorphism (PCR-RFLP) and DNA sequencing methods. The genetic effects on lung cancer susceptibility were evaluated using association analyses by the unconditional logistic regression model. Our data indicated that there were significant differences in the distribution of allelic and genotypic frequencies between lung cancer patients and cancer-free controls. The XRCC1 c.482C>T and c.1686C>G genetic variants were significantly associated with the susceptibility to lung cancer (for c.482C>T, TT versus (vs.) CC: OR=2.14, 95% CI 1.31–3.48, P=0.002; T vs. C: OR=1.37, 95% CI 1.10–1.69, P=0.004; for c.1686C>G, GG vs. CC: OR=2.53, 95% CI 1.46–4.38, P=0.001; G vs. C: OR=1.33, 95% CI 1.06–1.65, P=0.012). These preliminary results suggested that the XRCC1 c.482C>T and c.1686C>G genetic variants might play genetic effects on the susceptibility to lung cancer in the studied population.
•The XRCC1 gene plays an important role in the pathogenesis of lung cancer.•The c.482C>T and c.1686C>G are associated with the risk of lung cancer.•The XRCC1 gene contributes to lung cancer in Chinese Han populations. |
doi_str_mv | 10.1016/j.gene.2014.11.044 |
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•The XRCC1 gene plays an important role in the pathogenesis of lung cancer.•The c.482C>T and c.1686C>G are associated with the risk of lung cancer.•The XRCC1 gene contributes to lung cancer in Chinese Han populations.</description><identifier>ISSN: 0378-1119</identifier><identifier>EISSN: 1879-0038</identifier><identifier>DOI: 10.1016/j.gene.2014.11.044</identifier><identifier>PMID: 25433331</identifier><language>eng</language><publisher>Netherlands: Elsevier B.V</publisher><subject>Aged ; Asian Continental Ancestry Group - genetics ; Case-Control Studies ; DNA-Binding Proteins - genetics ; Female ; Genetic Association Studies ; Genetic Predisposition to Disease ; Genetic variants ; Genetic Variation ; Genotyping Techniques ; Humans ; Lung cancer ; Lung Neoplasms - genetics ; Male ; Middle Aged ; Molecular biomarkers ; Polymorphism, Single Nucleotide ; Single nucleotide polymorphisms ; Susceptibility ; X-ray Repair Cross Complementing Protein 1 ; XRCC1 gene</subject><ispartof>Gene, 2015-02, Vol.556 (2), p.127-131</ispartof><rights>2014 Elsevier B.V.</rights><rights>Copyright © 2014 Elsevier B.V. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c459t-e731ecd2ff7706f0373535fdc22107cfc323162dc8fa93837050f49c230149cf3</citedby><cites>FETCH-LOGICAL-c459t-e731ecd2ff7706f0373535fdc22107cfc323162dc8fa93837050f49c230149cf3</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.gene.2014.11.044$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,777,781,3537,27905,27906,45976</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/25433331$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Wang, Yingyi</creatorcontrib><creatorcontrib>Ni, Jianjiao</creatorcontrib><creatorcontrib>Sun, Zhao</creatorcontrib><creatorcontrib>Chen, Shuchang</creatorcontrib><creatorcontrib>Jiao, Yuchen</creatorcontrib><creatorcontrib>Bai, Chunmei</creatorcontrib><title>The influence of XRCC1 genetic variants on lung cancer susceptibility in Chinese Han population</title><title>Gene</title><addtitle>Gene</addtitle><description>Growing evidence suggests that genetic variants of X-ray repair cross-complementing group 1 proteins (XRCC1) contribute to genetic effects on the development of lung cancer. This case–control study aims to evaluate the genetic effects of XRCC1 c.482C>T and c.1686C>G single nucleotide polymorphisms (SNPs) on lung cancer susceptibility. 391 lung cancer patients and 398 cancer-free controls were enrolled in this study. The genotypes of c.482C>T and c.1686C>G genetic variants were detected by the created restriction site-polymerase chain reaction (CRS-PCR), PCR-restriction fragment length polymorphism (PCR-RFLP) and DNA sequencing methods. The genetic effects on lung cancer susceptibility were evaluated using association analyses by the unconditional logistic regression model. Our data indicated that there were significant differences in the distribution of allelic and genotypic frequencies between lung cancer patients and cancer-free controls. The XRCC1 c.482C>T and c.1686C>G genetic variants were significantly associated with the susceptibility to lung cancer (for c.482C>T, TT versus (vs.) CC: OR=2.14, 95% CI 1.31–3.48, P=0.002; T vs. C: OR=1.37, 95% CI 1.10–1.69, P=0.004; for c.1686C>G, GG vs. CC: OR=2.53, 95% CI 1.46–4.38, P=0.001; G vs. C: OR=1.33, 95% CI 1.06–1.65, P=0.012). These preliminary results suggested that the XRCC1 c.482C>T and c.1686C>G genetic variants might play genetic effects on the susceptibility to lung cancer in the studied population.
•The XRCC1 gene plays an important role in the pathogenesis of lung cancer.•The c.482C>T and c.1686C>G are associated with the risk of lung cancer.•The XRCC1 gene contributes to lung cancer in Chinese Han populations.</description><subject>Aged</subject><subject>Asian Continental Ancestry Group - genetics</subject><subject>Case-Control Studies</subject><subject>DNA-Binding Proteins - genetics</subject><subject>Female</subject><subject>Genetic Association Studies</subject><subject>Genetic Predisposition to Disease</subject><subject>Genetic variants</subject><subject>Genetic Variation</subject><subject>Genotyping Techniques</subject><subject>Humans</subject><subject>Lung cancer</subject><subject>Lung Neoplasms - genetics</subject><subject>Male</subject><subject>Middle Aged</subject><subject>Molecular biomarkers</subject><subject>Polymorphism, Single Nucleotide</subject><subject>Single nucleotide polymorphisms</subject><subject>Susceptibility</subject><subject>X-ray Repair Cross Complementing Protein 1</subject><subject>XRCC1 gene</subject><issn>0378-1119</issn><issn>1879-0038</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2015</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNkU1LHTEUhkNR6lX7B7ooWbqZMScf8wFuymBVEApFwV2ImRPNZW5mmswI_vtmuOqyeDbZPOfh5H0J-Q6sBAbV-bZ8woAlZyBLgJJJ-YVsoKnbgjHRHJANE3VTAEB7RI5T2rI8SvGv5IgrKfLAhui7Z6Q-uGHBYJGOjj786Tqgq3n2lr6Y6E2YEx0DHZbwRK3JXKRpSRan2T_6wc-v2UC7Zx8wIb02gU7jtAxm9mM4JYfODAm_vb0n5P7X5V13Xdz-vrrpft4WVqp2LrAWgLbnztU1q1w-XCihXG85B1ZbZwUXUPHeNs60ohE1U8zJ1nKRP99aJ07I2d47xfHvgmnWO58vHAYTcFyShkrJqhGsVZ9AJWsUSGgyyveojWNKEZ2eot-Z-KqB6bUDvdVrUnrtQAPo3EFe-vHmXx532H-svIeegYs9gDmQF49RJ-vX-Hsf0c66H_3__P8Al0iWmg</recordid><startdate>20150210</startdate><enddate>20150210</enddate><creator>Wang, Yingyi</creator><creator>Ni, Jianjiao</creator><creator>Sun, Zhao</creator><creator>Chen, Shuchang</creator><creator>Jiao, Yuchen</creator><creator>Bai, Chunmei</creator><general>Elsevier B.V</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope></search><sort><creationdate>20150210</creationdate><title>The influence of XRCC1 genetic variants on lung cancer susceptibility in Chinese Han population</title><author>Wang, Yingyi ; Ni, Jianjiao ; Sun, Zhao ; Chen, Shuchang ; Jiao, Yuchen ; Bai, Chunmei</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c459t-e731ecd2ff7706f0373535fdc22107cfc323162dc8fa93837050f49c230149cf3</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2015</creationdate><topic>Aged</topic><topic>Asian Continental Ancestry Group - genetics</topic><topic>Case-Control Studies</topic><topic>DNA-Binding Proteins - genetics</topic><topic>Female</topic><topic>Genetic Association Studies</topic><topic>Genetic Predisposition to Disease</topic><topic>Genetic variants</topic><topic>Genetic Variation</topic><topic>Genotyping Techniques</topic><topic>Humans</topic><topic>Lung cancer</topic><topic>Lung Neoplasms - genetics</topic><topic>Male</topic><topic>Middle Aged</topic><topic>Molecular biomarkers</topic><topic>Polymorphism, Single Nucleotide</topic><topic>Single nucleotide polymorphisms</topic><topic>Susceptibility</topic><topic>X-ray Repair Cross Complementing Protein 1</topic><topic>XRCC1 gene</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Wang, Yingyi</creatorcontrib><creatorcontrib>Ni, Jianjiao</creatorcontrib><creatorcontrib>Sun, Zhao</creatorcontrib><creatorcontrib>Chen, Shuchang</creatorcontrib><creatorcontrib>Jiao, Yuchen</creatorcontrib><creatorcontrib>Bai, Chunmei</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><jtitle>Gene</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Wang, Yingyi</au><au>Ni, Jianjiao</au><au>Sun, Zhao</au><au>Chen, Shuchang</au><au>Jiao, Yuchen</au><au>Bai, Chunmei</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>The influence of XRCC1 genetic variants on lung cancer susceptibility in Chinese Han population</atitle><jtitle>Gene</jtitle><addtitle>Gene</addtitle><date>2015-02-10</date><risdate>2015</risdate><volume>556</volume><issue>2</issue><spage>127</spage><epage>131</epage><pages>127-131</pages><issn>0378-1119</issn><eissn>1879-0038</eissn><abstract>Growing evidence suggests that genetic variants of X-ray repair cross-complementing group 1 proteins (XRCC1) contribute to genetic effects on the development of lung cancer. This case–control study aims to evaluate the genetic effects of XRCC1 c.482C>T and c.1686C>G single nucleotide polymorphisms (SNPs) on lung cancer susceptibility. 391 lung cancer patients and 398 cancer-free controls were enrolled in this study. The genotypes of c.482C>T and c.1686C>G genetic variants were detected by the created restriction site-polymerase chain reaction (CRS-PCR), PCR-restriction fragment length polymorphism (PCR-RFLP) and DNA sequencing methods. The genetic effects on lung cancer susceptibility were evaluated using association analyses by the unconditional logistic regression model. Our data indicated that there were significant differences in the distribution of allelic and genotypic frequencies between lung cancer patients and cancer-free controls. The XRCC1 c.482C>T and c.1686C>G genetic variants were significantly associated with the susceptibility to lung cancer (for c.482C>T, TT versus (vs.) CC: OR=2.14, 95% CI 1.31–3.48, P=0.002; T vs. C: OR=1.37, 95% CI 1.10–1.69, P=0.004; for c.1686C>G, GG vs. CC: OR=2.53, 95% CI 1.46–4.38, P=0.001; G vs. C: OR=1.33, 95% CI 1.06–1.65, P=0.012). These preliminary results suggested that the XRCC1 c.482C>T and c.1686C>G genetic variants might play genetic effects on the susceptibility to lung cancer in the studied population.
•The XRCC1 gene plays an important role in the pathogenesis of lung cancer.•The c.482C>T and c.1686C>G are associated with the risk of lung cancer.•The XRCC1 gene contributes to lung cancer in Chinese Han populations.</abstract><cop>Netherlands</cop><pub>Elsevier B.V</pub><pmid>25433331</pmid><doi>10.1016/j.gene.2014.11.044</doi><tpages>5</tpages></addata></record> |
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subjects | Aged Asian Continental Ancestry Group - genetics Case-Control Studies DNA-Binding Proteins - genetics Female Genetic Association Studies Genetic Predisposition to Disease Genetic variants Genetic Variation Genotyping Techniques Humans Lung cancer Lung Neoplasms - genetics Male Middle Aged Molecular biomarkers Polymorphism, Single Nucleotide Single nucleotide polymorphisms Susceptibility X-ray Repair Cross Complementing Protein 1 XRCC1 gene |
title | The influence of XRCC1 genetic variants on lung cancer susceptibility in Chinese Han population |
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