Diversity and community structure of fungi through a permafrost core profile from the Qinghai-Tibet Plateau of China

While a vast number of studies have addressed the prokaryotic diversity in permafrost, characterized by subzero temperatures, low water activity, and extremely low rates of nutrient and metabolite transfer, fungal patterns have received surprisingly limited attention. Here, the fungal diversity and...

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Veröffentlicht in:Journal of basic microbiology 2014-12, Vol.54 (12), p.1331-1341
Hauptverfasser: Hu, Weigang, Zhang, Qi, Li, Dingyao, Cheng, Gang, Mu, Jing, Wu, Qingbai, Niu, Fujun, An, Lizhe, Feng, Huyuan
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container_end_page 1341
container_issue 12
container_start_page 1331
container_title Journal of basic microbiology
container_volume 54
creator Hu, Weigang
Zhang, Qi
Li, Dingyao
Cheng, Gang
Mu, Jing
Wu, Qingbai
Niu, Fujun
An, Lizhe
Feng, Huyuan
description While a vast number of studies have addressed the prokaryotic diversity in permafrost, characterized by subzero temperatures, low water activity, and extremely low rates of nutrient and metabolite transfer, fungal patterns have received surprisingly limited attention. Here, the fungal diversity and community structure were investigated by culture‐dependent technique combined with cloning‐restriction fragment length polymorphism (RFLP) analysis of sediments in a 10‐m‐long permafrost core from the Qinghai‐Tibet Plateau of China. A total of 62 fungal phylotypes related to 10 distinct classes representing three phyla were recovered from 5031 clones generated in 13 environmental gene libraries. A large proportion of the phylotypes (25/62) that were distantly related to described fungal species appeared to be novel diversity. Ascomycota was the predominant group of fungi, with respect to both clone and phylotype number. Our results suggested there was the existence of cosmopolitan psychrophilic or psychrotolerant fungi in permafrost sediments, the community composition of fungi varied with increasing depth, while these communities largely distributed according to core layers.
doi_str_mv 10.1002/jobm.201400232
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source MEDLINE; Wiley Online Library Journals Frontfile Complete
subjects Ascomycota
Biodiversity
Community structure
Fungal diversity
Fungi - classification
Fungi - genetics
Genes, rRNA
Permafrost
Permafrost - microbiology
Phylogeny
Polymorphism, Restriction Fragment Length
Qinghai-Tibet Plateau
Tibet
title Diversity and community structure of fungi through a permafrost core profile from the Qinghai-Tibet Plateau of China
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