Evolution of the tyrosinase gene family in bivalve molluscs: Independent expansion of the mantle gene repertoire
[Display omitted] Tyrosinase is a copper-containing enzyme that mediates the hydroxylation of monophenols and oxidation of o-diphenols to o-quinones. This enzyme is involved in a variety of biological processes, including pigment production, innate immunity, wound healing, and exoskeleton fabricatio...
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Tyrosinase is a copper-containing enzyme that mediates the hydroxylation of monophenols and oxidation of o-diphenols to o-quinones. This enzyme is involved in a variety of biological processes, including pigment production, innate immunity, wound healing, and exoskeleton fabrication and hardening (e.g. arthropod skeleton and mollusc shell). Here we show that the tyrosinase gene family has undergone large expansions in pearl oysters (Pinctada spp.) and the Pacific oyster (Crassostrea gigas). Phylogenetic analysis reveals that pearl oysters possess at least four tyrosinase genes that are not present in the Pacific oyster. Likewise, C. gigas has multiple tyrosinase genes that are not orthologous to the Pinctada genes, indicating that this gene family has expanded independently in these bivalve lineages. Many of the tyrosinase genes in these bivalves are expressed at relatively high levels in the mantle, the organ responsible for shell fabrication. Detailed comparisons of tyrosinase gene expression in different regions of the mantle in two closely related pearl oysters, P. maxima and P. margaritifera, reveals that recently evolved orthologous tyrosinase genes can have markedly different expression profiles. The expansion of tyrosinase genes in these oysters and their co-option into the mantle’s gene regulatory network is consistent with mollusc shell formation being underpinned by a rapidly evolving transcriptome. |
doi_str_mv | 10.1016/j.actbio.2014.03.031 |
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Tyrosinase is a copper-containing enzyme that mediates the hydroxylation of monophenols and oxidation of o-diphenols to o-quinones. This enzyme is involved in a variety of biological processes, including pigment production, innate immunity, wound healing, and exoskeleton fabrication and hardening (e.g. arthropod skeleton and mollusc shell). Here we show that the tyrosinase gene family has undergone large expansions in pearl oysters (Pinctada spp.) and the Pacific oyster (Crassostrea gigas). Phylogenetic analysis reveals that pearl oysters possess at least four tyrosinase genes that are not present in the Pacific oyster. Likewise, C. gigas has multiple tyrosinase genes that are not orthologous to the Pinctada genes, indicating that this gene family has expanded independently in these bivalve lineages. Many of the tyrosinase genes in these bivalves are expressed at relatively high levels in the mantle, the organ responsible for shell fabrication. Detailed comparisons of tyrosinase gene expression in different regions of the mantle in two closely related pearl oysters, P. maxima and P. margaritifera, reveals that recently evolved orthologous tyrosinase genes can have markedly different expression profiles. The expansion of tyrosinase genes in these oysters and their co-option into the mantle’s gene regulatory network is consistent with mollusc shell formation being underpinned by a rapidly evolving transcriptome.</description><identifier>ISSN: 1742-7061</identifier><identifier>EISSN: 1878-7568</identifier><identifier>DOI: 10.1016/j.actbio.2014.03.031</identifier><identifier>PMID: 24704693</identifier><language>eng</language><publisher>England: Elsevier Ltd</publisher><subject>Animal Shells - enzymology ; Animals ; Arthropoda ; Bivalve ; Bivalvia ; Bivalvia - enzymology ; Bivalvia - genetics ; Crassostrea gigas ; Enzymes ; Evolution, Molecular ; Gastropod ; Gene expression ; Gene Expression Regulation, Enzymologic ; Genes ; Genetic Linkage ; Genome - genetics ; Mantle ; Margaritifera ; Maxima ; Monophenol Monooxygenase - genetics ; Multigene Family ; Oysters ; Phylogeny ; Pinctada ; Pinctada - enzymology ; Pinctada - genetics ; RNA, Messenger - genetics ; RNA, Messenger - metabolism ; Shell formation ; Shells ; Synteny - genetics ; Transcriptome - genetics ; Tyrosinase</subject><ispartof>Acta biomaterialia, 2014-09, Vol.10 (9), p.3855-3865</ispartof><rights>2014 Acta Materialia Inc.</rights><rights>Copyright © 2014 Acta Materialia Inc. Published by Elsevier Ltd. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c564t-fcc0ae5112fa8f0ed06bb316b646fef671a2dbbad45a0c6aeaca1880096d8d573</citedby><cites>FETCH-LOGICAL-c564t-fcc0ae5112fa8f0ed06bb316b646fef671a2dbbad45a0c6aeaca1880096d8d573</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.actbio.2014.03.031$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,778,782,3539,27911,27912,45982</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/24704693$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Aguilera, Felipe</creatorcontrib><creatorcontrib>McDougall, Carmel</creatorcontrib><creatorcontrib>Degnan, Bernard M.</creatorcontrib><title>Evolution of the tyrosinase gene family in bivalve molluscs: Independent expansion of the mantle gene repertoire</title><title>Acta biomaterialia</title><addtitle>Acta Biomater</addtitle><description>[Display omitted]
Tyrosinase is a copper-containing enzyme that mediates the hydroxylation of monophenols and oxidation of o-diphenols to o-quinones. This enzyme is involved in a variety of biological processes, including pigment production, innate immunity, wound healing, and exoskeleton fabrication and hardening (e.g. arthropod skeleton and mollusc shell). Here we show that the tyrosinase gene family has undergone large expansions in pearl oysters (Pinctada spp.) and the Pacific oyster (Crassostrea gigas). Phylogenetic analysis reveals that pearl oysters possess at least four tyrosinase genes that are not present in the Pacific oyster. Likewise, C. gigas has multiple tyrosinase genes that are not orthologous to the Pinctada genes, indicating that this gene family has expanded independently in these bivalve lineages. Many of the tyrosinase genes in these bivalves are expressed at relatively high levels in the mantle, the organ responsible for shell fabrication. Detailed comparisons of tyrosinase gene expression in different regions of the mantle in two closely related pearl oysters, P. maxima and P. margaritifera, reveals that recently evolved orthologous tyrosinase genes can have markedly different expression profiles. The expansion of tyrosinase genes in these oysters and their co-option into the mantle’s gene regulatory network is consistent with mollusc shell formation being underpinned by a rapidly evolving transcriptome.</description><subject>Animal Shells - enzymology</subject><subject>Animals</subject><subject>Arthropoda</subject><subject>Bivalve</subject><subject>Bivalvia</subject><subject>Bivalvia - enzymology</subject><subject>Bivalvia - genetics</subject><subject>Crassostrea gigas</subject><subject>Enzymes</subject><subject>Evolution, Molecular</subject><subject>Gastropod</subject><subject>Gene expression</subject><subject>Gene Expression Regulation, Enzymologic</subject><subject>Genes</subject><subject>Genetic Linkage</subject><subject>Genome - genetics</subject><subject>Mantle</subject><subject>Margaritifera</subject><subject>Maxima</subject><subject>Monophenol Monooxygenase - genetics</subject><subject>Multigene Family</subject><subject>Oysters</subject><subject>Phylogeny</subject><subject>Pinctada</subject><subject>Pinctada - enzymology</subject><subject>Pinctada - genetics</subject><subject>RNA, Messenger - genetics</subject><subject>RNA, Messenger - metabolism</subject><subject>Shell formation</subject><subject>Shells</subject><subject>Synteny - genetics</subject><subject>Transcriptome - genetics</subject><subject>Tyrosinase</subject><issn>1742-7061</issn><issn>1878-7568</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNkU-LFDEQxYMo7j-_gUiOXnpM0ukk7UGQZXUXFvbinkM6qdYM3UmbpIedb2-GGcWTLhRVdfjVK3gPobeUbCih4sN2Y2wZfNwwQvmGtLXoC3ROlVSN7IR6WXfJWSOJoGfoIuctIa2iTL1GZ4xLwkXfnqPlZhentfgYcBxx-QG47FPMPpgM-DsEwKOZ_bTHPuDB78y0AzzHaVqzzR_xXXCwQG2hYHhaTMh_Cc0mlOkkkiqWSvQJrtCr0UwZ3pzmJXr8cvPt-ra5f_h6d_35vrGd4KUZrSUGOkrZaNRIwBExDC0Vg-BihFFIapgbBuN4Z4gVBow1VClCeuGU62R7id4fdZcUf66Qi559tjBNJkBcs6aCs5bRTj4HZbJXhPX9_9Guoy2TnNCK8iNqq585waiX5GeT9poSfUhQb_UxQX1IUJO21uHs3enDOszg_hz9jqwCn44AVPd2HpLO1kOw4Kq7tmgX_b8__AJw5rAw</recordid><startdate>20140901</startdate><enddate>20140901</enddate><creator>Aguilera, Felipe</creator><creator>McDougall, Carmel</creator><creator>Degnan, Bernard M.</creator><general>Elsevier Ltd</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7QO</scope><scope>8FD</scope><scope>F1W</scope><scope>FR3</scope><scope>H95</scope><scope>L.G</scope><scope>P64</scope><scope>RC3</scope><scope>7SR</scope><scope>7TB</scope><scope>7U5</scope><scope>8BQ</scope><scope>F28</scope><scope>JG9</scope><scope>L7M</scope></search><sort><creationdate>20140901</creationdate><title>Evolution of the tyrosinase gene family in bivalve molluscs: Independent expansion of the mantle gene repertoire</title><author>Aguilera, Felipe ; McDougall, Carmel ; Degnan, Bernard M.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c564t-fcc0ae5112fa8f0ed06bb316b646fef671a2dbbad45a0c6aeaca1880096d8d573</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>Animal Shells - enzymology</topic><topic>Animals</topic><topic>Arthropoda</topic><topic>Bivalve</topic><topic>Bivalvia</topic><topic>Bivalvia - enzymology</topic><topic>Bivalvia - genetics</topic><topic>Crassostrea gigas</topic><topic>Enzymes</topic><topic>Evolution, Molecular</topic><topic>Gastropod</topic><topic>Gene expression</topic><topic>Gene Expression Regulation, Enzymologic</topic><topic>Genes</topic><topic>Genetic Linkage</topic><topic>Genome - genetics</topic><topic>Mantle</topic><topic>Margaritifera</topic><topic>Maxima</topic><topic>Monophenol Monooxygenase - genetics</topic><topic>Multigene Family</topic><topic>Oysters</topic><topic>Phylogeny</topic><topic>Pinctada</topic><topic>Pinctada - enzymology</topic><topic>Pinctada - genetics</topic><topic>RNA, Messenger - genetics</topic><topic>RNA, Messenger - metabolism</topic><topic>Shell formation</topic><topic>Shells</topic><topic>Synteny - genetics</topic><topic>Transcriptome - genetics</topic><topic>Tyrosinase</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Aguilera, Felipe</creatorcontrib><creatorcontrib>McDougall, Carmel</creatorcontrib><creatorcontrib>Degnan, Bernard M.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Biotechnology Research Abstracts</collection><collection>Technology Research Database</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Engineering Research Database</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><collection>Engineered Materials Abstracts</collection><collection>Mechanical & Transportation Engineering Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>METADEX</collection><collection>ANTE: Abstracts in New Technology & Engineering</collection><collection>Materials Research Database</collection><collection>Advanced Technologies Database with Aerospace</collection><jtitle>Acta biomaterialia</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Aguilera, Felipe</au><au>McDougall, Carmel</au><au>Degnan, Bernard M.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Evolution of the tyrosinase gene family in bivalve molluscs: Independent expansion of the mantle gene repertoire</atitle><jtitle>Acta biomaterialia</jtitle><addtitle>Acta Biomater</addtitle><date>2014-09-01</date><risdate>2014</risdate><volume>10</volume><issue>9</issue><spage>3855</spage><epage>3865</epage><pages>3855-3865</pages><issn>1742-7061</issn><eissn>1878-7568</eissn><abstract>[Display omitted]
Tyrosinase is a copper-containing enzyme that mediates the hydroxylation of monophenols and oxidation of o-diphenols to o-quinones. This enzyme is involved in a variety of biological processes, including pigment production, innate immunity, wound healing, and exoskeleton fabrication and hardening (e.g. arthropod skeleton and mollusc shell). Here we show that the tyrosinase gene family has undergone large expansions in pearl oysters (Pinctada spp.) and the Pacific oyster (Crassostrea gigas). Phylogenetic analysis reveals that pearl oysters possess at least four tyrosinase genes that are not present in the Pacific oyster. Likewise, C. gigas has multiple tyrosinase genes that are not orthologous to the Pinctada genes, indicating that this gene family has expanded independently in these bivalve lineages. Many of the tyrosinase genes in these bivalves are expressed at relatively high levels in the mantle, the organ responsible for shell fabrication. Detailed comparisons of tyrosinase gene expression in different regions of the mantle in two closely related pearl oysters, P. maxima and P. margaritifera, reveals that recently evolved orthologous tyrosinase genes can have markedly different expression profiles. The expansion of tyrosinase genes in these oysters and their co-option into the mantle’s gene regulatory network is consistent with mollusc shell formation being underpinned by a rapidly evolving transcriptome.</abstract><cop>England</cop><pub>Elsevier Ltd</pub><pmid>24704693</pmid><doi>10.1016/j.actbio.2014.03.031</doi><tpages>11</tpages></addata></record> |
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subjects | Animal Shells - enzymology Animals Arthropoda Bivalve Bivalvia Bivalvia - enzymology Bivalvia - genetics Crassostrea gigas Enzymes Evolution, Molecular Gastropod Gene expression Gene Expression Regulation, Enzymologic Genes Genetic Linkage Genome - genetics Mantle Margaritifera Maxima Monophenol Monooxygenase - genetics Multigene Family Oysters Phylogeny Pinctada Pinctada - enzymology Pinctada - genetics RNA, Messenger - genetics RNA, Messenger - metabolism Shell formation Shells Synteny - genetics Transcriptome - genetics Tyrosinase |
title | Evolution of the tyrosinase gene family in bivalve molluscs: Independent expansion of the mantle gene repertoire |
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