Complete genome sequence of the hydrogenotrophic Archaeon Methanobacterium sp. Mb1 isolated from a production-scale biogas plant
•First genome sequence of a Methanobacterium sp. isolate from a production-scale biogas plant is reported.•Methanobacterium sp. Mb1 represents a new species within the genus Methanobacterium.•The Methanobacterium sp. Mb1 genome is the smallest genome known so far within the genus Methanobacterium. M...
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| Veröffentlicht in: | Journal of biotechnology 2013-12, Vol.168 (4), p.734-736 |
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| container_title | Journal of biotechnology |
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| creator | Maus, Irena Wibberg, Daniel Stantscheff, Robbin Cibis, Katharina Eikmeyer, Felix-Gregor König, Helmut Pühler, Alfred Schlüter, Andreas |
| description | •First genome sequence of a Methanobacterium sp. isolate from a production-scale biogas plant is reported.•Methanobacterium sp. Mb1 represents a new species within the genus Methanobacterium.•The Methanobacterium sp. Mb1 genome is the smallest genome known so far within the genus Methanobacterium.
Methanobacterium sp. Mb1, a hydrogenotrophic methanogenic Archaeon, was isolated from a rural biogas plant producing methane-rich biogas from maize silage and cattle manure in Germany. Here we report the complete genome sequence of the novel methanogenic isolate Methanobacterium sp. Mb1 harboring a 2,029,766bp circular chromosome featuring a GC content of 39.74%. The genome encodes two rRNA operons, 41 tRNA genes and 2021 coding sequences and represents the smallest genome currently known within the genus Methanobacterium. |
| doi_str_mv | 10.1016/j.jbiotec.2013.10.013 |
| format | Article |
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Methanobacterium sp. Mb1, a hydrogenotrophic methanogenic Archaeon, was isolated from a rural biogas plant producing methane-rich biogas from maize silage and cattle manure in Germany. Here we report the complete genome sequence of the novel methanogenic isolate Methanobacterium sp. Mb1 harboring a 2,029,766bp circular chromosome featuring a GC content of 39.74%. The genome encodes two rRNA operons, 41 tRNA genes and 2021 coding sequences and represents the smallest genome currently known within the genus Methanobacterium.</description><identifier>ISSN: 0168-1656</identifier><identifier>EISSN: 1873-4863</identifier><identifier>DOI: 10.1016/j.jbiotec.2013.10.013</identifier><identifier>PMID: 24184088</identifier><language>eng</language><publisher>Netherlands: Elsevier B.V</publisher><subject>Animals ; Base Sequence ; Biogas ; Biogas plant ; Biotechnology ; Cattle - microbiology ; cattle manure ; Chromosomes ; corn silage ; Gene sequencing ; Genes ; Genome ; Genome, Archaeal - genetics ; Genomes ; High-throughput sequencing ; Methane - metabolism ; Methanobacterium ; Methanobacterium - genetics ; Methanogenesis ; methanogens ; Molecular Sequence Data ; nucleotide sequences ; operon ; Phylogeny ; Plants (organisms) ; ribosomal RNA ; RNA, Ribosomal, 16S - genetics ; Sequence Analysis, DNA ; Silage ; transfer RNA ; Zea mays ; Zea mays - microbiology</subject><ispartof>Journal of biotechnology, 2013-12, Vol.168 (4), p.734-736</ispartof><rights>2013 Elsevier B.V.</rights><rights>Copyright © 2013 Elsevier B.V. All rights reserved.</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c455t-90c7fbf07614d51aa36cac8f8af506c70079af41c40227b0a1f5c3606eacab793</citedby><cites>FETCH-LOGICAL-c455t-90c7fbf07614d51aa36cac8f8af506c70079af41c40227b0a1f5c3606eacab793</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://dx.doi.org/10.1016/j.jbiotec.2013.10.013$$EHTML$$P50$$Gelsevier$$H</linktohtml><link.rule.ids>314,780,784,3550,27924,27925,45995</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/24184088$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Maus, Irena</creatorcontrib><creatorcontrib>Wibberg, Daniel</creatorcontrib><creatorcontrib>Stantscheff, Robbin</creatorcontrib><creatorcontrib>Cibis, Katharina</creatorcontrib><creatorcontrib>Eikmeyer, Felix-Gregor</creatorcontrib><creatorcontrib>König, Helmut</creatorcontrib><creatorcontrib>Pühler, Alfred</creatorcontrib><creatorcontrib>Schlüter, Andreas</creatorcontrib><title>Complete genome sequence of the hydrogenotrophic Archaeon Methanobacterium sp. Mb1 isolated from a production-scale biogas plant</title><title>Journal of biotechnology</title><addtitle>J Biotechnol</addtitle><description>•First genome sequence of a Methanobacterium sp. isolate from a production-scale biogas plant is reported.•Methanobacterium sp. Mb1 represents a new species within the genus Methanobacterium.•The Methanobacterium sp. Mb1 genome is the smallest genome known so far within the genus Methanobacterium.
Methanobacterium sp. Mb1, a hydrogenotrophic methanogenic Archaeon, was isolated from a rural biogas plant producing methane-rich biogas from maize silage and cattle manure in Germany. Here we report the complete genome sequence of the novel methanogenic isolate Methanobacterium sp. Mb1 harboring a 2,029,766bp circular chromosome featuring a GC content of 39.74%. The genome encodes two rRNA operons, 41 tRNA genes and 2021 coding sequences and represents the smallest genome currently known within the genus Methanobacterium.</description><subject>Animals</subject><subject>Base Sequence</subject><subject>Biogas</subject><subject>Biogas plant</subject><subject>Biotechnology</subject><subject>Cattle - microbiology</subject><subject>cattle manure</subject><subject>Chromosomes</subject><subject>corn silage</subject><subject>Gene sequencing</subject><subject>Genes</subject><subject>Genome</subject><subject>Genome, Archaeal - genetics</subject><subject>Genomes</subject><subject>High-throughput sequencing</subject><subject>Methane - metabolism</subject><subject>Methanobacterium</subject><subject>Methanobacterium - genetics</subject><subject>Methanogenesis</subject><subject>methanogens</subject><subject>Molecular Sequence Data</subject><subject>nucleotide sequences</subject><subject>operon</subject><subject>Phylogeny</subject><subject>Plants (organisms)</subject><subject>ribosomal RNA</subject><subject>RNA, Ribosomal, 16S - genetics</subject><subject>Sequence Analysis, DNA</subject><subject>Silage</subject><subject>transfer RNA</subject><subject>Zea mays</subject><subject>Zea mays - microbiology</subject><issn>0168-1656</issn><issn>1873-4863</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2013</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNkU-P1SAUxYnROM_Rj6CydNMKLdB2ZSYv_ktm4kJnTW7p5T1e2lKBmszOjy7Ne7p1Vie5_O7hwCHkNWclZ1y9P5Wn3vmEpqwYr_OszPKE7Hjb1IVoVf2U7DLXFlxJdUVexHhijIlO8ufkqhK8Faxtd-T33k_LiAnpAWc_IY34c8XZIPWWpiPS48MQ_HaWgl-OztCbYI6AfqZ3mI4w-x5MwuDWicalpHc9py76ERIO1AY_UaBL8MNqkvNzEQ2MSHPwA0S6jDCnl-SZhTHiq4tek_tPH3_svxS33z5_3d_cFkZImYqOmcb2ljWKi0FygFoZMK1twUqmTMNY04EV3AhWVU3PgFtpasUUgoG-6epr8u7sm9PkF8akJxcNjjkD-jVqrkRVCaWEegRaS1bVrHsEKpQQXY6xBZBn1AQfY0Crl-AmCA-aM71Vqk_6UqneKt3GWfLem8sVaz_h8G_rb4cZeHsGLHgNh-Civv-eHSTLpqpWIhMfzgTmD_7lMOho3Fby4AKapAfv_hPiDzHuvyg</recordid><startdate>20131201</startdate><enddate>20131201</enddate><creator>Maus, Irena</creator><creator>Wibberg, Daniel</creator><creator>Stantscheff, Robbin</creator><creator>Cibis, Katharina</creator><creator>Eikmeyer, Felix-Gregor</creator><creator>König, Helmut</creator><creator>Pühler, Alfred</creator><creator>Schlüter, Andreas</creator><general>Elsevier B.V</general><scope>FBQ</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7X8</scope><scope>7QO</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>7TB</scope><scope>7U5</scope><scope>L7M</scope></search><sort><creationdate>20131201</creationdate><title>Complete genome sequence of the hydrogenotrophic Archaeon Methanobacterium sp. Mb1 isolated from a production-scale biogas plant</title><author>Maus, Irena ; Wibberg, Daniel ; Stantscheff, Robbin ; Cibis, Katharina ; Eikmeyer, Felix-Gregor ; König, Helmut ; Pühler, Alfred ; Schlüter, Andreas</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c455t-90c7fbf07614d51aa36cac8f8af506c70079af41c40227b0a1f5c3606eacab793</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2013</creationdate><topic>Animals</topic><topic>Base Sequence</topic><topic>Biogas</topic><topic>Biogas plant</topic><topic>Biotechnology</topic><topic>Cattle - microbiology</topic><topic>cattle manure</topic><topic>Chromosomes</topic><topic>corn silage</topic><topic>Gene sequencing</topic><topic>Genes</topic><topic>Genome</topic><topic>Genome, Archaeal - genetics</topic><topic>Genomes</topic><topic>High-throughput sequencing</topic><topic>Methane - metabolism</topic><topic>Methanobacterium</topic><topic>Methanobacterium - genetics</topic><topic>Methanogenesis</topic><topic>methanogens</topic><topic>Molecular Sequence Data</topic><topic>nucleotide sequences</topic><topic>operon</topic><topic>Phylogeny</topic><topic>Plants (organisms)</topic><topic>ribosomal RNA</topic><topic>RNA, Ribosomal, 16S - genetics</topic><topic>Sequence Analysis, DNA</topic><topic>Silage</topic><topic>transfer RNA</topic><topic>Zea mays</topic><topic>Zea mays - microbiology</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Maus, Irena</creatorcontrib><creatorcontrib>Wibberg, Daniel</creatorcontrib><creatorcontrib>Stantscheff, Robbin</creatorcontrib><creatorcontrib>Cibis, Katharina</creatorcontrib><creatorcontrib>Eikmeyer, Felix-Gregor</creatorcontrib><creatorcontrib>König, Helmut</creatorcontrib><creatorcontrib>Pühler, Alfred</creatorcontrib><creatorcontrib>Schlüter, Andreas</creatorcontrib><collection>AGRIS</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>MEDLINE - Academic</collection><collection>Biotechnology Research Abstracts</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Mechanical & Transportation Engineering Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>Advanced Technologies Database with Aerospace</collection><jtitle>Journal of biotechnology</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Maus, Irena</au><au>Wibberg, Daniel</au><au>Stantscheff, Robbin</au><au>Cibis, Katharina</au><au>Eikmeyer, Felix-Gregor</au><au>König, Helmut</au><au>Pühler, Alfred</au><au>Schlüter, Andreas</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Complete genome sequence of the hydrogenotrophic Archaeon Methanobacterium sp. Mb1 isolated from a production-scale biogas plant</atitle><jtitle>Journal of biotechnology</jtitle><addtitle>J Biotechnol</addtitle><date>2013-12-01</date><risdate>2013</risdate><volume>168</volume><issue>4</issue><spage>734</spage><epage>736</epage><pages>734-736</pages><issn>0168-1656</issn><eissn>1873-4863</eissn><abstract>•First genome sequence of a Methanobacterium sp. isolate from a production-scale biogas plant is reported.•Methanobacterium sp. Mb1 represents a new species within the genus Methanobacterium.•The Methanobacterium sp. Mb1 genome is the smallest genome known so far within the genus Methanobacterium.
Methanobacterium sp. Mb1, a hydrogenotrophic methanogenic Archaeon, was isolated from a rural biogas plant producing methane-rich biogas from maize silage and cattle manure in Germany. Here we report the complete genome sequence of the novel methanogenic isolate Methanobacterium sp. Mb1 harboring a 2,029,766bp circular chromosome featuring a GC content of 39.74%. The genome encodes two rRNA operons, 41 tRNA genes and 2021 coding sequences and represents the smallest genome currently known within the genus Methanobacterium.</abstract><cop>Netherlands</cop><pub>Elsevier B.V</pub><pmid>24184088</pmid><doi>10.1016/j.jbiotec.2013.10.013</doi><tpages>3</tpages></addata></record> |
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| subjects | Animals Base Sequence Biogas Biogas plant Biotechnology Cattle - microbiology cattle manure Chromosomes corn silage Gene sequencing Genes Genome Genome, Archaeal - genetics Genomes High-throughput sequencing Methane - metabolism Methanobacterium Methanobacterium - genetics Methanogenesis methanogens Molecular Sequence Data nucleotide sequences operon Phylogeny Plants (organisms) ribosomal RNA RNA, Ribosomal, 16S - genetics Sequence Analysis, DNA Silage transfer RNA Zea mays Zea mays - microbiology |
| title | Complete genome sequence of the hydrogenotrophic Archaeon Methanobacterium sp. Mb1 isolated from a production-scale biogas plant |
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