Role of γ-Carboxyglutamic Acid in the Calcium-Induced Structural Transition of Conantokin G, a Conotoxin from the Marine Snail Conus geographus
Conantokin G is a γ-carboxyglutamic acid- (Gla-) containing conotoxin isolated from the venom of the marine cone snail Conus geographus. This 17-residue polypeptide, which contains five γ-carboxyglutamic acid residues, is a N-methyl-d-aspartate- (NMDA-) type glutamate receptor antagonist. To investi...
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Veröffentlicht in: | Biochemistry (Easton) 1997-12, Vol.36 (50), p.15677-15684 |
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description | Conantokin G is a γ-carboxyglutamic acid- (Gla-) containing conotoxin isolated from the venom of the marine cone snail Conus geographus. This 17-residue polypeptide, which contains five γ-carboxyglutamic acid residues, is a N-methyl-d-aspartate- (NMDA-) type glutamate receptor antagonist. To investigate the role of γ-carboxyglutamic acid in the calcium-induced structural transition of conantokin G, we determined the three-dimensional structure of the conantokin G/Ca2+ complex by two-dimensional 1H NMR spectroscopy and compared it to the high-resolution structure of conantokin G in the absence of metal ions [Rigby et al. (1997) Biochemistry 36, 6906]. Complete resonance assignments were made by two dimensional 1H NMR spectroscopy at pH 5.6 in the presence of saturating amounts of Ca2+. Distance geometry and simulated annealing methods were used to derive 23 convergent structures from a set of 302 interproton distance restraints and two torsion angle measurements. A high-resolution structure, with the backbone root mean square deviation to the geometric average of the 23 structures of 0.6 ± 0.1 Å, contains a linear α-helix from Gla 3 to Lys 15. Gla residues 3, 7, 10, and 14 are aligned in a linear array on one face of the helix. A genetic algorithm was applied to determine the calcium positions in conantokin G, and the conantokin G/Ca2+ complex refined by molecular simulation. Upon binding of Ca2+ to γ-carboxyglutamic acid, conantokin G undergoes a conformational transition from a distorted curvilinear 310 helix to a linear α-helix. Occupancy of the metal binding sites, defined by γ-carboxyglutamic acids, results in formation of a calcium−carboxylate network that linearizes the helix and exposes the hydrophobic amino acids on the opposite face of the helix. |
doi_str_mv | 10.1021/bi9718550 |
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This 17-residue polypeptide, which contains five γ-carboxyglutamic acid residues, is a N-methyl-d-aspartate- (NMDA-) type glutamate receptor antagonist. To investigate the role of γ-carboxyglutamic acid in the calcium-induced structural transition of conantokin G, we determined the three-dimensional structure of the conantokin G/Ca2+ complex by two-dimensional 1H NMR spectroscopy and compared it to the high-resolution structure of conantokin G in the absence of metal ions [Rigby et al. (1997) Biochemistry 36, 6906]. Complete resonance assignments were made by two dimensional 1H NMR spectroscopy at pH 5.6 in the presence of saturating amounts of Ca2+. Distance geometry and simulated annealing methods were used to derive 23 convergent structures from a set of 302 interproton distance restraints and two torsion angle measurements. A high-resolution structure, with the backbone root mean square deviation to the geometric average of the 23 structures of 0.6 ± 0.1 Å, contains a linear α-helix from Gla 3 to Lys 15. Gla residues 3, 7, 10, and 14 are aligned in a linear array on one face of the helix. A genetic algorithm was applied to determine the calcium positions in conantokin G, and the conantokin G/Ca2+ complex refined by molecular simulation. Upon binding of Ca2+ to γ-carboxyglutamic acid, conantokin G undergoes a conformational transition from a distorted curvilinear 310 helix to a linear α-helix. Occupancy of the metal binding sites, defined by γ-carboxyglutamic acids, results in formation of a calcium−carboxylate network that linearizes the helix and exposes the hydrophobic amino acids on the opposite face of the helix.</description><identifier>ISSN: 0006-2960</identifier><identifier>EISSN: 1520-4995</identifier><identifier>DOI: 10.1021/bi9718550</identifier><identifier>PMID: 9398296</identifier><language>eng</language><publisher>United States: American Chemical Society</publisher><subject>1-Carboxyglutamic Acid - chemistry ; 1-Carboxyglutamic Acid - metabolism ; Algorithms ; Amino Acid Sequence ; Animals ; Binding Sites ; Calcium - chemistry ; Calcium - metabolism ; Computer Simulation ; Conotoxins ; Conus geographus ; Magnetic Resonance Spectroscopy ; Models, Molecular ; Molecular Sequence Data ; Mollusk Venoms - chemistry ; Mollusk Venoms - metabolism ; Peptides, Cyclic - chemistry ; Peptides, Cyclic - metabolism ; Protein Binding ; Protein Conformation ; Protein Structure, Secondary ; Receptors, N-Methyl-D-Aspartate - antagonists & inhibitors ; Snails - chemistry</subject><ispartof>Biochemistry (Easton), 1997-12, Vol.36 (50), p.15677-15684</ispartof><rights>Copyright © 1997 American Chemical Society</rights><lds50>peer_reviewed</lds50><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-a379t-70857dae6d04e7b9016983762d3abeb646b1206d09928bbec25d96c96a245b213</citedby><cites>FETCH-LOGICAL-a379t-70857dae6d04e7b9016983762d3abeb646b1206d09928bbec25d96c96a245b213</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://pubs.acs.org/doi/pdf/10.1021/bi9718550$$EPDF$$P50$$Gacs$$H</linktopdf><linktohtml>$$Uhttps://pubs.acs.org/doi/10.1021/bi9718550$$EHTML$$P50$$Gacs$$H</linktohtml><link.rule.ids>314,780,784,2765,27076,27924,27925,56738,56788</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/9398296$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Rigby, Alan C</creatorcontrib><creatorcontrib>Baleja, James D</creatorcontrib><creatorcontrib>Li, Leping</creatorcontrib><creatorcontrib>Pedersen, Lee G</creatorcontrib><creatorcontrib>Furie, Barbara C</creatorcontrib><creatorcontrib>Furie, Bruce</creatorcontrib><title>Role of γ-Carboxyglutamic Acid in the Calcium-Induced Structural Transition of Conantokin G, a Conotoxin from the Marine Snail Conus geographus</title><title>Biochemistry (Easton)</title><addtitle>Biochemistry</addtitle><description>Conantokin G is a γ-carboxyglutamic acid- (Gla-) containing conotoxin isolated from the venom of the marine cone snail Conus geographus. This 17-residue polypeptide, which contains five γ-carboxyglutamic acid residues, is a N-methyl-d-aspartate- (NMDA-) type glutamate receptor antagonist. To investigate the role of γ-carboxyglutamic acid in the calcium-induced structural transition of conantokin G, we determined the three-dimensional structure of the conantokin G/Ca2+ complex by two-dimensional 1H NMR spectroscopy and compared it to the high-resolution structure of conantokin G in the absence of metal ions [Rigby et al. (1997) Biochemistry 36, 6906]. Complete resonance assignments were made by two dimensional 1H NMR spectroscopy at pH 5.6 in the presence of saturating amounts of Ca2+. Distance geometry and simulated annealing methods were used to derive 23 convergent structures from a set of 302 interproton distance restraints and two torsion angle measurements. A high-resolution structure, with the backbone root mean square deviation to the geometric average of the 23 structures of 0.6 ± 0.1 Å, contains a linear α-helix from Gla 3 to Lys 15. Gla residues 3, 7, 10, and 14 are aligned in a linear array on one face of the helix. A genetic algorithm was applied to determine the calcium positions in conantokin G, and the conantokin G/Ca2+ complex refined by molecular simulation. Upon binding of Ca2+ to γ-carboxyglutamic acid, conantokin G undergoes a conformational transition from a distorted curvilinear 310 helix to a linear α-helix. Occupancy of the metal binding sites, defined by γ-carboxyglutamic acids, results in formation of a calcium−carboxylate network that linearizes the helix and exposes the hydrophobic amino acids on the opposite face of the helix.</description><subject>1-Carboxyglutamic Acid - chemistry</subject><subject>1-Carboxyglutamic Acid - metabolism</subject><subject>Algorithms</subject><subject>Amino Acid Sequence</subject><subject>Animals</subject><subject>Binding Sites</subject><subject>Calcium - chemistry</subject><subject>Calcium - metabolism</subject><subject>Computer Simulation</subject><subject>Conotoxins</subject><subject>Conus geographus</subject><subject>Magnetic Resonance Spectroscopy</subject><subject>Models, Molecular</subject><subject>Molecular Sequence Data</subject><subject>Mollusk Venoms - chemistry</subject><subject>Mollusk Venoms - metabolism</subject><subject>Peptides, Cyclic - chemistry</subject><subject>Peptides, Cyclic - metabolism</subject><subject>Protein Binding</subject><subject>Protein Conformation</subject><subject>Protein Structure, Secondary</subject><subject>Receptors, N-Methyl-D-Aspartate - antagonists & inhibitors</subject><subject>Snails - chemistry</subject><issn>0006-2960</issn><issn>1520-4995</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1997</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNptkE1uEzEAhS0EKqGw4ABI3lAJiQHbM2OPl9UI0krhN4EFG8v2OKnbGTv4R0pvwV24B2fCIVFWrKzn7_Oz9AB4jtEbjAh-qyxnuGtb9ADMcEtQ1XDePgQzhBCtCKfoMXgS422JDWLNGTjjNe_K_Qz8-upHA_0a_vld9TIov7vfjDnJyWp4qe0ArYPpxsBejtrmqbp2Q9ZmgMsUsk45yBGugnTRJuvdvqf3Trrk78q7-Wso99knvytxHfz0r-uDDNYZuHTSjnueI9wYvwlye5PjU_BoLcdonh3Pc_Dt_btVf1UtPs2v-8tFJWvGU8VQ17JBGjqgxjDFEaa8qxklQy2VUbShChNUKOekU8po0g6cak4laVpFcH0OLg692-B_ZhOTmGzUZhylMz5HgWndME5oEV8dRB18jMGsxTbYSYZ7gZHYry9O6xf3xbE0q8kMJ_M4d-HVgduYzO6EZbgTlNWsFavPS8HnVx-__Fh8F6vivzz4Ukdx63NwZZL__PsXEGib9w</recordid><startdate>19971216</startdate><enddate>19971216</enddate><creator>Rigby, Alan C</creator><creator>Baleja, James D</creator><creator>Li, Leping</creator><creator>Pedersen, Lee G</creator><creator>Furie, Barbara C</creator><creator>Furie, Bruce</creator><general>American Chemical Society</general><scope>BSCLL</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7U7</scope><scope>8FD</scope><scope>C1K</scope><scope>F1W</scope><scope>FR3</scope><scope>H95</scope><scope>H99</scope><scope>L.F</scope><scope>L.G</scope><scope>P64</scope></search><sort><creationdate>19971216</creationdate><title>Role of γ-Carboxyglutamic Acid in the Calcium-Induced Structural Transition of Conantokin G, a Conotoxin from the Marine Snail Conus geographus</title><author>Rigby, Alan C ; Baleja, James D ; Li, Leping ; Pedersen, Lee G ; Furie, Barbara C ; Furie, Bruce</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-a379t-70857dae6d04e7b9016983762d3abeb646b1206d09928bbec25d96c96a245b213</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1997</creationdate><topic>1-Carboxyglutamic Acid - chemistry</topic><topic>1-Carboxyglutamic Acid - metabolism</topic><topic>Algorithms</topic><topic>Amino Acid Sequence</topic><topic>Animals</topic><topic>Binding Sites</topic><topic>Calcium - chemistry</topic><topic>Calcium - metabolism</topic><topic>Computer Simulation</topic><topic>Conotoxins</topic><topic>Conus geographus</topic><topic>Magnetic Resonance Spectroscopy</topic><topic>Models, Molecular</topic><topic>Molecular Sequence Data</topic><topic>Mollusk Venoms - chemistry</topic><topic>Mollusk Venoms - metabolism</topic><topic>Peptides, Cyclic - chemistry</topic><topic>Peptides, Cyclic - metabolism</topic><topic>Protein Binding</topic><topic>Protein Conformation</topic><topic>Protein Structure, Secondary</topic><topic>Receptors, N-Methyl-D-Aspartate - antagonists & inhibitors</topic><topic>Snails - chemistry</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Rigby, Alan C</creatorcontrib><creatorcontrib>Baleja, James D</creatorcontrib><creatorcontrib>Li, Leping</creatorcontrib><creatorcontrib>Pedersen, Lee G</creatorcontrib><creatorcontrib>Furie, Barbara C</creatorcontrib><creatorcontrib>Furie, Bruce</creatorcontrib><collection>Istex</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Toxicology Abstracts</collection><collection>Technology Research Database</collection><collection>Environmental Sciences and Pollution Management</collection><collection>ASFA: Aquatic Sciences and Fisheries Abstracts</collection><collection>Engineering Research Database</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) 1: Biological Sciences & Living Resources</collection><collection>ASFA: Marine Biotechnology Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Marine Biotechnology Abstracts</collection><collection>Aquatic Science & Fisheries Abstracts (ASFA) Professional</collection><collection>Biotechnology and BioEngineering Abstracts</collection><jtitle>Biochemistry (Easton)</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Rigby, Alan C</au><au>Baleja, James D</au><au>Li, Leping</au><au>Pedersen, Lee G</au><au>Furie, Barbara C</au><au>Furie, Bruce</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Role of γ-Carboxyglutamic Acid in the Calcium-Induced Structural Transition of Conantokin G, a Conotoxin from the Marine Snail Conus geographus</atitle><jtitle>Biochemistry (Easton)</jtitle><addtitle>Biochemistry</addtitle><date>1997-12-16</date><risdate>1997</risdate><volume>36</volume><issue>50</issue><spage>15677</spage><epage>15684</epage><pages>15677-15684</pages><issn>0006-2960</issn><eissn>1520-4995</eissn><abstract>Conantokin G is a γ-carboxyglutamic acid- (Gla-) containing conotoxin isolated from the venom of the marine cone snail Conus geographus. This 17-residue polypeptide, which contains five γ-carboxyglutamic acid residues, is a N-methyl-d-aspartate- (NMDA-) type glutamate receptor antagonist. To investigate the role of γ-carboxyglutamic acid in the calcium-induced structural transition of conantokin G, we determined the three-dimensional structure of the conantokin G/Ca2+ complex by two-dimensional 1H NMR spectroscopy and compared it to the high-resolution structure of conantokin G in the absence of metal ions [Rigby et al. (1997) Biochemistry 36, 6906]. Complete resonance assignments were made by two dimensional 1H NMR spectroscopy at pH 5.6 in the presence of saturating amounts of Ca2+. Distance geometry and simulated annealing methods were used to derive 23 convergent structures from a set of 302 interproton distance restraints and two torsion angle measurements. A high-resolution structure, with the backbone root mean square deviation to the geometric average of the 23 structures of 0.6 ± 0.1 Å, contains a linear α-helix from Gla 3 to Lys 15. Gla residues 3, 7, 10, and 14 are aligned in a linear array on one face of the helix. A genetic algorithm was applied to determine the calcium positions in conantokin G, and the conantokin G/Ca2+ complex refined by molecular simulation. Upon binding of Ca2+ to γ-carboxyglutamic acid, conantokin G undergoes a conformational transition from a distorted curvilinear 310 helix to a linear α-helix. Occupancy of the metal binding sites, defined by γ-carboxyglutamic acids, results in formation of a calcium−carboxylate network that linearizes the helix and exposes the hydrophobic amino acids on the opposite face of the helix.</abstract><cop>United States</cop><pub>American Chemical Society</pub><pmid>9398296</pmid><doi>10.1021/bi9718550</doi><tpages>8</tpages></addata></record> |
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subjects | 1-Carboxyglutamic Acid - chemistry 1-Carboxyglutamic Acid - metabolism Algorithms Amino Acid Sequence Animals Binding Sites Calcium - chemistry Calcium - metabolism Computer Simulation Conotoxins Conus geographus Magnetic Resonance Spectroscopy Models, Molecular Molecular Sequence Data Mollusk Venoms - chemistry Mollusk Venoms - metabolism Peptides, Cyclic - chemistry Peptides, Cyclic - metabolism Protein Binding Protein Conformation Protein Structure, Secondary Receptors, N-Methyl-D-Aspartate - antagonists & inhibitors Snails - chemistry |
title | Role of γ-Carboxyglutamic Acid in the Calcium-Induced Structural Transition of Conantokin G, a Conotoxin from the Marine Snail Conus geographus |
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