Diffuse Optical Tomography Enhanced by Clustered Sparsity for Functional Brain Imaging
Diffuse optical tomography (DOT) is a noninvasive technique which measures hemodynamic changes in the tissue with near infrared light, which has been increasingly used to study brain functions. Due to the nature of light propagation in the tissue, the reconstruction problem is severely ill-posed. Fo...
Gespeichert in:
Veröffentlicht in: | IEEE transactions on medical imaging 2014-12, Vol.33 (12), p.2323-2331 |
---|---|
Hauptverfasser: | , , , |
Format: | Artikel |
Sprache: | eng |
Schlagworte: | |
Online-Zugang: | Volltext bestellen |
Tags: |
Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
|
container_end_page | 2331 |
---|---|
container_issue | 12 |
container_start_page | 2323 |
container_title | IEEE transactions on medical imaging |
container_volume | 33 |
creator | Chen, Chen Tian, Fenghua Liu, Hanli Huang, Junzhou |
description | Diffuse optical tomography (DOT) is a noninvasive technique which measures hemodynamic changes in the tissue with near infrared light, which has been increasingly used to study brain functions. Due to the nature of light propagation in the tissue, the reconstruction problem is severely ill-posed. For linearized DOT problems, sparsity regularization has achieved promising results over conventional Tikhonov regularization in recent experimental research. As extensions to standard sparsity, it is widely known that structured sparsity based methods are often superior in terms of reconstruction accuracy, when the data follows some structures. In this paper, we exploit the structured sparsity of diffuse optical images. Based on the functional specialization of the brain, it is observed that the in vivo absorption changes caused by a specific brain function would be clustered in certain region(s) and not randomly distributed. Thus, a new algorithm is proposed for this clustered sparsity reconstruction (CSR). Results of numerical simulations and phantom experiments have demonstrated the superiority of the proposed method over the state-of-the-art methods. An example from human in vivo measurements further confirmed the advantages of the proposed CSR method. |
doi_str_mv | 10.1109/TMI.2014.2338214 |
format | Article |
fullrecord | <record><control><sourceid>proquest_RIE</sourceid><recordid>TN_cdi_proquest_miscellaneous_1629976546</recordid><sourceformat>XML</sourceformat><sourcesystem>PC</sourcesystem><ieee_id>6858051</ieee_id><sourcerecordid>3512703741</sourcerecordid><originalsourceid>FETCH-LOGICAL-c413t-da4be4dc8bc1e4b65ec1e6b649f5d5d9b61fbaeed4fff4ca07681007329348c73</originalsourceid><addsrcrecordid>eNqNkT1PHDEQhq2ICA5CHwkJrURDs5fx53pLuEByEhFFLlG6ldc7Poz2C3u3uH8fo7tQpKIajeZ532IeQj5TWFIK5ZfNj_WSARVLxrlmVHwgCyqlzpkUf47IAlihcwDFTshpjM-QSAnlMTlhEqTkGhbk91fv3Bwxexwnb02bbYZu2AYzPu2yu_7J9BabrN5lq3aOE4a0_BxNiH7aZW4I2f3c28kPfQreBuP7bN2Zre-3n8hHZ9qI54d5Rn7d321W3_OHx2_r1c1DbgXlU94YUaNorK4tRVEriWmqWonSyUY2Za2oqw1iI5xzwhoolKYABWclF9oW_Ixc73vHMLzMGKeq89Fi25oehzlWVEkqQBeFfgcqIH2Iqfe0srIslBQqoVf_oc_DHNI_9hRVALxMFOwpG4YYA7pqDL4zYVdRqF5NVslk9WqyOphMkctD8Vx32LwF_qlLwMUe8Ij4dlZaapCU_wUE9aDb</addsrcrecordid><sourcetype>Aggregation Database</sourcetype><iscdi>true</iscdi><recordtype>article</recordtype><pqid>1629160039</pqid></control><display><type>article</type><title>Diffuse Optical Tomography Enhanced by Clustered Sparsity for Functional Brain Imaging</title><source>IEEE Electronic Library Online</source><creator>Chen, Chen ; Tian, Fenghua ; Liu, Hanli ; Huang, Junzhou</creator><creatorcontrib>Chen, Chen ; Tian, Fenghua ; Liu, Hanli ; Huang, Junzhou</creatorcontrib><description>Diffuse optical tomography (DOT) is a noninvasive technique which measures hemodynamic changes in the tissue with near infrared light, which has been increasingly used to study brain functions. Due to the nature of light propagation in the tissue, the reconstruction problem is severely ill-posed. For linearized DOT problems, sparsity regularization has achieved promising results over conventional Tikhonov regularization in recent experimental research. As extensions to standard sparsity, it is widely known that structured sparsity based methods are often superior in terms of reconstruction accuracy, when the data follows some structures. In this paper, we exploit the structured sparsity of diffuse optical images. Based on the functional specialization of the brain, it is observed that the in vivo absorption changes caused by a specific brain function would be clustered in certain region(s) and not randomly distributed. Thus, a new algorithm is proposed for this clustered sparsity reconstruction (CSR). Results of numerical simulations and phantom experiments have demonstrated the superiority of the proposed method over the state-of-the-art methods. An example from human in vivo measurements further confirmed the advantages of the proposed CSR method.</description><identifier>ISSN: 0278-0062</identifier><identifier>EISSN: 1558-254X</identifier><identifier>DOI: 10.1109/TMI.2014.2338214</identifier><identifier>PMID: 25055380</identifier><identifier>CODEN: ITMID4</identifier><language>eng</language><publisher>United States: IEEE</publisher><subject>Absorption ; Algorithms ; Biomedical materials ; Biomedical optical imaging ; Brain ; Brain - anatomy & histology ; Brain - physiology ; Clustered sparsity ; Clustering ; Computer Simulation ; diffuse optical tomography (DOT) ; Diffusion ; functional brain imaging ; Functional Neuroimaging - methods ; Humans ; Image reconstruction ; Mathematical models ; Noise ; Optical imaging ; Phantoms, Imaging ; Reconstruction ; Regularization ; Reproducibility of Results ; Sparsity ; structured sparsity ; Surgical implants ; Tomography, Optical - methods ; US Department of Transportation</subject><ispartof>IEEE transactions on medical imaging, 2014-12, Vol.33 (12), p.2323-2331</ispartof><rights>Copyright The Institute of Electrical and Electronics Engineers, Inc. (IEEE) Dec 2014</rights><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c413t-da4be4dc8bc1e4b65ec1e6b649f5d5d9b61fbaeed4fff4ca07681007329348c73</citedby><cites>FETCH-LOGICAL-c413t-da4be4dc8bc1e4b65ec1e6b649f5d5d9b61fbaeed4fff4ca07681007329348c73</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktohtml>$$Uhttps://ieeexplore.ieee.org/document/6858051$$EHTML$$P50$$Gieee$$H</linktohtml><link.rule.ids>314,776,780,792,27901,27902,54733</link.rule.ids><linktorsrc>$$Uhttps://ieeexplore.ieee.org/document/6858051$$EView_record_in_IEEE$$FView_record_in_$$GIEEE</linktorsrc><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/25055380$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Chen, Chen</creatorcontrib><creatorcontrib>Tian, Fenghua</creatorcontrib><creatorcontrib>Liu, Hanli</creatorcontrib><creatorcontrib>Huang, Junzhou</creatorcontrib><title>Diffuse Optical Tomography Enhanced by Clustered Sparsity for Functional Brain Imaging</title><title>IEEE transactions on medical imaging</title><addtitle>TMI</addtitle><addtitle>IEEE Trans Med Imaging</addtitle><description>Diffuse optical tomography (DOT) is a noninvasive technique which measures hemodynamic changes in the tissue with near infrared light, which has been increasingly used to study brain functions. Due to the nature of light propagation in the tissue, the reconstruction problem is severely ill-posed. For linearized DOT problems, sparsity regularization has achieved promising results over conventional Tikhonov regularization in recent experimental research. As extensions to standard sparsity, it is widely known that structured sparsity based methods are often superior in terms of reconstruction accuracy, when the data follows some structures. In this paper, we exploit the structured sparsity of diffuse optical images. Based on the functional specialization of the brain, it is observed that the in vivo absorption changes caused by a specific brain function would be clustered in certain region(s) and not randomly distributed. Thus, a new algorithm is proposed for this clustered sparsity reconstruction (CSR). Results of numerical simulations and phantom experiments have demonstrated the superiority of the proposed method over the state-of-the-art methods. An example from human in vivo measurements further confirmed the advantages of the proposed CSR method.</description><subject>Absorption</subject><subject>Algorithms</subject><subject>Biomedical materials</subject><subject>Biomedical optical imaging</subject><subject>Brain</subject><subject>Brain - anatomy & histology</subject><subject>Brain - physiology</subject><subject>Clustered sparsity</subject><subject>Clustering</subject><subject>Computer Simulation</subject><subject>diffuse optical tomography (DOT)</subject><subject>Diffusion</subject><subject>functional brain imaging</subject><subject>Functional Neuroimaging - methods</subject><subject>Humans</subject><subject>Image reconstruction</subject><subject>Mathematical models</subject><subject>Noise</subject><subject>Optical imaging</subject><subject>Phantoms, Imaging</subject><subject>Reconstruction</subject><subject>Regularization</subject><subject>Reproducibility of Results</subject><subject>Sparsity</subject><subject>structured sparsity</subject><subject>Surgical implants</subject><subject>Tomography, Optical - methods</subject><subject>US Department of Transportation</subject><issn>0278-0062</issn><issn>1558-254X</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>2014</creationdate><recordtype>article</recordtype><sourceid>RIE</sourceid><sourceid>EIF</sourceid><recordid>eNqNkT1PHDEQhq2ICA5CHwkJrURDs5fx53pLuEByEhFFLlG6ldc7Poz2C3u3uH8fo7tQpKIajeZ532IeQj5TWFIK5ZfNj_WSARVLxrlmVHwgCyqlzpkUf47IAlihcwDFTshpjM-QSAnlMTlhEqTkGhbk91fv3Bwxexwnb02bbYZu2AYzPu2yu_7J9BabrN5lq3aOE4a0_BxNiH7aZW4I2f3c28kPfQreBuP7bN2Zre-3n8hHZ9qI54d5Rn7d321W3_OHx2_r1c1DbgXlU94YUaNorK4tRVEriWmqWonSyUY2Za2oqw1iI5xzwhoolKYABWclF9oW_Ixc73vHMLzMGKeq89Fi25oehzlWVEkqQBeFfgcqIH2Iqfe0srIslBQqoVf_oc_DHNI_9hRVALxMFOwpG4YYA7pqDL4zYVdRqF5NVslk9WqyOphMkctD8Vx32LwF_qlLwMUe8Ij4dlZaapCU_wUE9aDb</recordid><startdate>201412</startdate><enddate>201412</enddate><creator>Chen, Chen</creator><creator>Tian, Fenghua</creator><creator>Liu, Hanli</creator><creator>Huang, Junzhou</creator><general>IEEE</general><general>The Institute of Electrical and Electronics Engineers, Inc. (IEEE)</general><scope>97E</scope><scope>RIA</scope><scope>RIE</scope><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7QF</scope><scope>7QO</scope><scope>7QQ</scope><scope>7SC</scope><scope>7SE</scope><scope>7SP</scope><scope>7SR</scope><scope>7TA</scope><scope>7TB</scope><scope>7U5</scope><scope>8BQ</scope><scope>8FD</scope><scope>F28</scope><scope>FR3</scope><scope>H8D</scope><scope>JG9</scope><scope>JQ2</scope><scope>KR7</scope><scope>L7M</scope><scope>L~C</scope><scope>L~D</scope><scope>NAPCQ</scope><scope>P64</scope><scope>7X8</scope></search><sort><creationdate>201412</creationdate><title>Diffuse Optical Tomography Enhanced by Clustered Sparsity for Functional Brain Imaging</title><author>Chen, Chen ; Tian, Fenghua ; Liu, Hanli ; Huang, Junzhou</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c413t-da4be4dc8bc1e4b65ec1e6b649f5d5d9b61fbaeed4fff4ca07681007329348c73</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>2014</creationdate><topic>Absorption</topic><topic>Algorithms</topic><topic>Biomedical materials</topic><topic>Biomedical optical imaging</topic><topic>Brain</topic><topic>Brain - anatomy & histology</topic><topic>Brain - physiology</topic><topic>Clustered sparsity</topic><topic>Clustering</topic><topic>Computer Simulation</topic><topic>diffuse optical tomography (DOT)</topic><topic>Diffusion</topic><topic>functional brain imaging</topic><topic>Functional Neuroimaging - methods</topic><topic>Humans</topic><topic>Image reconstruction</topic><topic>Mathematical models</topic><topic>Noise</topic><topic>Optical imaging</topic><topic>Phantoms, Imaging</topic><topic>Reconstruction</topic><topic>Regularization</topic><topic>Reproducibility of Results</topic><topic>Sparsity</topic><topic>structured sparsity</topic><topic>Surgical implants</topic><topic>Tomography, Optical - methods</topic><topic>US Department of Transportation</topic><toplevel>online_resources</toplevel><creatorcontrib>Chen, Chen</creatorcontrib><creatorcontrib>Tian, Fenghua</creatorcontrib><creatorcontrib>Liu, Hanli</creatorcontrib><creatorcontrib>Huang, Junzhou</creatorcontrib><collection>IEEE All-Society Periodicals Package (ASPP) 2005-present</collection><collection>IEEE All-Society Periodicals Package (ASPP) 1998-Present</collection><collection>IEEE Electronic Library Online</collection><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Aluminium Industry Abstracts</collection><collection>Biotechnology Research Abstracts</collection><collection>Ceramic Abstracts</collection><collection>Computer and Information Systems Abstracts</collection><collection>Corrosion Abstracts</collection><collection>Electronics & Communications Abstracts</collection><collection>Engineered Materials Abstracts</collection><collection>Materials Business File</collection><collection>Mechanical & Transportation Engineering Abstracts</collection><collection>Solid State and Superconductivity Abstracts</collection><collection>METADEX</collection><collection>Technology Research Database</collection><collection>ANTE: Abstracts in New Technology & Engineering</collection><collection>Engineering Research Database</collection><collection>Aerospace Database</collection><collection>Materials Research Database</collection><collection>ProQuest Computer Science Collection</collection><collection>Civil Engineering Abstracts</collection><collection>Advanced Technologies Database with Aerospace</collection><collection>Computer and Information Systems Abstracts Academic</collection><collection>Computer and Information Systems Abstracts Professional</collection><collection>Nursing & Allied Health Premium</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>MEDLINE - Academic</collection><jtitle>IEEE transactions on medical imaging</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext_linktorsrc</fulltext></delivery><addata><au>Chen, Chen</au><au>Tian, Fenghua</au><au>Liu, Hanli</au><au>Huang, Junzhou</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Diffuse Optical Tomography Enhanced by Clustered Sparsity for Functional Brain Imaging</atitle><jtitle>IEEE transactions on medical imaging</jtitle><stitle>TMI</stitle><addtitle>IEEE Trans Med Imaging</addtitle><date>2014-12</date><risdate>2014</risdate><volume>33</volume><issue>12</issue><spage>2323</spage><epage>2331</epage><pages>2323-2331</pages><issn>0278-0062</issn><eissn>1558-254X</eissn><coden>ITMID4</coden><abstract>Diffuse optical tomography (DOT) is a noninvasive technique which measures hemodynamic changes in the tissue with near infrared light, which has been increasingly used to study brain functions. Due to the nature of light propagation in the tissue, the reconstruction problem is severely ill-posed. For linearized DOT problems, sparsity regularization has achieved promising results over conventional Tikhonov regularization in recent experimental research. As extensions to standard sparsity, it is widely known that structured sparsity based methods are often superior in terms of reconstruction accuracy, when the data follows some structures. In this paper, we exploit the structured sparsity of diffuse optical images. Based on the functional specialization of the brain, it is observed that the in vivo absorption changes caused by a specific brain function would be clustered in certain region(s) and not randomly distributed. Thus, a new algorithm is proposed for this clustered sparsity reconstruction (CSR). Results of numerical simulations and phantom experiments have demonstrated the superiority of the proposed method over the state-of-the-art methods. An example from human in vivo measurements further confirmed the advantages of the proposed CSR method.</abstract><cop>United States</cop><pub>IEEE</pub><pmid>25055380</pmid><doi>10.1109/TMI.2014.2338214</doi><tpages>9</tpages></addata></record> |
fulltext | fulltext_linktorsrc |
identifier | ISSN: 0278-0062 |
ispartof | IEEE transactions on medical imaging, 2014-12, Vol.33 (12), p.2323-2331 |
issn | 0278-0062 1558-254X |
language | eng |
recordid | cdi_proquest_miscellaneous_1629976546 |
source | IEEE Electronic Library Online |
subjects | Absorption Algorithms Biomedical materials Biomedical optical imaging Brain Brain - anatomy & histology Brain - physiology Clustered sparsity Clustering Computer Simulation diffuse optical tomography (DOT) Diffusion functional brain imaging Functional Neuroimaging - methods Humans Image reconstruction Mathematical models Noise Optical imaging Phantoms, Imaging Reconstruction Regularization Reproducibility of Results Sparsity structured sparsity Surgical implants Tomography, Optical - methods US Department of Transportation |
title | Diffuse Optical Tomography Enhanced by Clustered Sparsity for Functional Brain Imaging |
url | https://sfx.bib-bvb.de/sfx_tum?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&ctx_tim=2025-02-07T17%3A54%3A21IST&url_ver=Z39.88-2004&url_ctx_fmt=infofi/fmt:kev:mtx:ctx&rfr_id=info:sid/primo.exlibrisgroup.com:primo3-Article-proquest_RIE&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft.genre=article&rft.atitle=Diffuse%20Optical%20Tomography%20Enhanced%20by%20Clustered%20Sparsity%20for%20Functional%20Brain%20Imaging&rft.jtitle=IEEE%20transactions%20on%20medical%20imaging&rft.au=Chen,%20Chen&rft.date=2014-12&rft.volume=33&rft.issue=12&rft.spage=2323&rft.epage=2331&rft.pages=2323-2331&rft.issn=0278-0062&rft.eissn=1558-254X&rft.coden=ITMID4&rft_id=info:doi/10.1109/TMI.2014.2338214&rft_dat=%3Cproquest_RIE%3E3512703741%3C/proquest_RIE%3E%3Curl%3E%3C/url%3E&disable_directlink=true&sfx.directlink=off&sfx.report_link=0&rft_id=info:oai/&rft_pqid=1629160039&rft_id=info:pmid/25055380&rft_ieee_id=6858051&rfr_iscdi=true |