Properties of Xanthine Dehydrogenase Variants from Rosy Mutant Strains of Drosophila melanogaster and their Relevance to the enzyme's Structure and Mechanism
Xanthine dehydrogenase, a molybdenum, iron‐sulfur flavoenzyme encoded in the fruit fly Drosophila melanogaster by the rosy gene, has been characterised both from the wild‐type and mutant flies. Enzyme assays, using a variety of different oxidising and reducing substrates were supplemented by limited...
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description | Xanthine dehydrogenase, a molybdenum, iron‐sulfur flavoenzyme encoded in the fruit fly Drosophila melanogaster by the rosy gene, has been characterised both from the wild‐type and mutant flies. Enzyme assays, using a variety of different oxidising and reducing substrates were supplemented by limited molecular characterisation. Four rosy strains showed no detectable activity in any enzyme assay tried, whereas from four wild‐type and three rosy mutant strains, those for the [E89K], [L127F] and [L157P]xanthine dehydrogenases (in all of which the mutation is in the iron‐sulfur domain), the enzyme molecules, although present at different levels, had extremely similar or identical properties. This was confirmed by purification of one wild‐type and one mutant enzyme, [E89K]xanthine dehydrogenase. These both had ultraviolet–visible absorption spectra similar to milk xanthine oxidase. Both were found to be quite stable molecules, showing very high catalytic‐centre activities and with little tendency to become degraded by proteolysis or modified by conversion to oxidase or desulfo forms. In three further rosy strains, giving [G353D]xanthine dehydrogenase and [S357F]xanthine dehydrogenase mutated in the flavin domain, and [G1011E]xanthine dehydrogenase mutated in the molybdenum domain, enzyme activities were selectively diminished in certain assays. For the G353D and S357F mutant enzymes activities to NAD+ as oxidising substrate were diminished, to zero for the latter. In addition for [G353D]xanthine dehydrogenase, there was an increase in apparent Km values both for NAD+ and NADH. These findings indicate involvement of this part of the sequence in the NAD+‐binding site. The G1011E mutation has a profound effect on the enzyme. As isolated and as present in crude extracts of the flies, this xanthine dehydrogenase variant lacks activity to xanthine or pterin as reducing substrate, indicating an impairment of the functioning of its molybdenum centre. However, it retains full activity to NADH with dyes as oxidising substrate. Mild oxidation of the enzyme converts it, apparently irreversibly, to a form showing full activity to xanthine and pterin. The nature of the group that is oxidised is discussed in the light of redox potential data. It is proposed that the process involves oxidation of the pterin of the molybdenum cofactor from the tetrahydro to a dihydro oxidation state. This conclusion is fully consistent with recent information [Romão, M. J., Archer, M., Moura, I. |
doi_str_mv | 10.1111/j.1432-1033.1996.0782u.x |
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Lee ; Whittle, J. Robert S. ; Bray, Robert C.</creator><creatorcontrib>Doyle, Wendy A. ; Burke, Julian F. ; Chovnick, Arthur ; Dutton, F. Lee ; Whittle, J. Robert S. ; Bray, Robert C.</creatorcontrib><description>Xanthine dehydrogenase, a molybdenum, iron‐sulfur flavoenzyme encoded in the fruit fly Drosophila melanogaster by the rosy gene, has been characterised both from the wild‐type and mutant flies. Enzyme assays, using a variety of different oxidising and reducing substrates were supplemented by limited molecular characterisation. Four rosy strains showed no detectable activity in any enzyme assay tried, whereas from four wild‐type and three rosy mutant strains, those for the [E89K], [L127F] and [L157P]xanthine dehydrogenases (in all of which the mutation is in the iron‐sulfur domain), the enzyme molecules, although present at different levels, had extremely similar or identical properties. This was confirmed by purification of one wild‐type and one mutant enzyme, [E89K]xanthine dehydrogenase. These both had ultraviolet–visible absorption spectra similar to milk xanthine oxidase. Both were found to be quite stable molecules, showing very high catalytic‐centre activities and with little tendency to become degraded by proteolysis or modified by conversion to oxidase or desulfo forms. In three further rosy strains, giving [G353D]xanthine dehydrogenase and [S357F]xanthine dehydrogenase mutated in the flavin domain, and [G1011E]xanthine dehydrogenase mutated in the molybdenum domain, enzyme activities were selectively diminished in certain assays. For the G353D and S357F mutant enzymes activities to NAD+ as oxidising substrate were diminished, to zero for the latter. In addition for [G353D]xanthine dehydrogenase, there was an increase in apparent Km values both for NAD+ and NADH. These findings indicate involvement of this part of the sequence in the NAD+‐binding site. The G1011E mutation has a profound effect on the enzyme. As isolated and as present in crude extracts of the flies, this xanthine dehydrogenase variant lacks activity to xanthine or pterin as reducing substrate, indicating an impairment of the functioning of its molybdenum centre. However, it retains full activity to NADH with dyes as oxidising substrate. Mild oxidation of the enzyme converts it, apparently irreversibly, to a form showing full activity to xanthine and pterin. The nature of the group that is oxidised is discussed in the light of redox potential data. It is proposed that the process involves oxidation of the pterin of the molybdenum cofactor from the tetrahydro to a dihydro oxidation state. This conclusion is fully consistent with recent information [Romão, M. J., Archer, M., Moura, I., Moura, J. J. G., LeGall, J., Engh, R., Schneider, M., Hof, P. & Huber, R. (1995) Science 270, 1170–1176] from X‐ray crystallography on the structure of a closely related enzyme from Desulfovibrio gigas. It is proposed, that apparent irreversibility of the oxidative activating process for [G1011E]xanthine dehydrogenase, is due to conversion of its pterin to the tricyclic derivative detected by these workers. The data thus provide the strongest evidence available, that the oxidation state of the pterin can have a controlling influence on the activity of a molybdenum cofactor enzyme. Implications regarding pterin incorporation into xanthine dehydrogenase and in relation to other molybdenum enzymes are discussed.</description><identifier>ISSN: 0014-2956</identifier><identifier>EISSN: 1432-1033</identifier><identifier>DOI: 10.1111/j.1432-1033.1996.0782u.x</identifier><identifier>PMID: 8774727</identifier><language>eng</language><publisher>Oxford, UK: Blackwell Science Ltd</publisher><subject>Amino Acid Sequence ; Animals ; Binding Sites ; Coenzymes ; Conserved Sequence ; Cross Reactions ; Desulfovibrio gigas ; Drosophila melanogaster ; Drosophila melanogaster - enzymology ; Drosophila melanogaster - genetics ; Enzyme Activation ; Genetic Variation ; Kinetics ; Metalloproteins ; Molecular Sequence Data ; molybdenum‐center activation by oxidation ; Mutagenesis, Site-Directed ; Mutation ; NAD - metabolism ; NAD+/NADH‐binding site ; Oxidation-Reduction ; Pteridines ; pterin molybdenum cofactor ; rosy mutant strains of Drosophila melanogaster ; Sequence Homology, Amino Acid ; Structure-Activity Relationship ; Xanthine ; xanthine dehydrogenase ; Xanthine Dehydrogenase - genetics ; Xanthine Dehydrogenase - immunology ; Xanthine Dehydrogenase - metabolism ; Xanthines - metabolism</subject><ispartof>European journal of biochemistry, 1996-08, Vol.239 (3), p.782-795</ispartof><lds50>peer_reviewed</lds50><oa>free_for_read</oa><woscitedreferencessubscribed>false</woscitedreferencessubscribed><citedby>FETCH-LOGICAL-c475U-a66d034a29e262bf14ac3a54807c5d1974a004632a985b9fac855eed5ab6a4c13</citedby><cites>FETCH-LOGICAL-c475U-a66d034a29e262bf14ac3a54807c5d1974a004632a985b9fac855eed5ab6a4c13</cites></display><links><openurl>$$Topenurl_article</openurl><openurlfulltext>$$Topenurlfull_article</openurlfulltext><thumbnail>$$Tsyndetics_thumb_exl</thumbnail><linktopdf>$$Uhttps://onlinelibrary.wiley.com/doi/pdf/10.1111%2Fj.1432-1033.1996.0782u.x$$EPDF$$P50$$Gwiley$$H</linktopdf><linktohtml>$$Uhttps://onlinelibrary.wiley.com/doi/full/10.1111%2Fj.1432-1033.1996.0782u.x$$EHTML$$P50$$Gwiley$$H</linktohtml><link.rule.ids>314,780,784,1417,27923,27924,45573,45574</link.rule.ids><backlink>$$Uhttps://www.ncbi.nlm.nih.gov/pubmed/8774727$$D View this record in MEDLINE/PubMed$$Hfree_for_read</backlink></links><search><creatorcontrib>Doyle, Wendy A.</creatorcontrib><creatorcontrib>Burke, Julian F.</creatorcontrib><creatorcontrib>Chovnick, Arthur</creatorcontrib><creatorcontrib>Dutton, F. Lee</creatorcontrib><creatorcontrib>Whittle, J. Robert S.</creatorcontrib><creatorcontrib>Bray, Robert C.</creatorcontrib><title>Properties of Xanthine Dehydrogenase Variants from Rosy Mutant Strains of Drosophila melanogaster and their Relevance to the enzyme's Structure and Mechanism</title><title>European journal of biochemistry</title><addtitle>Eur J Biochem</addtitle><description>Xanthine dehydrogenase, a molybdenum, iron‐sulfur flavoenzyme encoded in the fruit fly Drosophila melanogaster by the rosy gene, has been characterised both from the wild‐type and mutant flies. Enzyme assays, using a variety of different oxidising and reducing substrates were supplemented by limited molecular characterisation. Four rosy strains showed no detectable activity in any enzyme assay tried, whereas from four wild‐type and three rosy mutant strains, those for the [E89K], [L127F] and [L157P]xanthine dehydrogenases (in all of which the mutation is in the iron‐sulfur domain), the enzyme molecules, although present at different levels, had extremely similar or identical properties. This was confirmed by purification of one wild‐type and one mutant enzyme, [E89K]xanthine dehydrogenase. These both had ultraviolet–visible absorption spectra similar to milk xanthine oxidase. Both were found to be quite stable molecules, showing very high catalytic‐centre activities and with little tendency to become degraded by proteolysis or modified by conversion to oxidase or desulfo forms. In three further rosy strains, giving [G353D]xanthine dehydrogenase and [S357F]xanthine dehydrogenase mutated in the flavin domain, and [G1011E]xanthine dehydrogenase mutated in the molybdenum domain, enzyme activities were selectively diminished in certain assays. For the G353D and S357F mutant enzymes activities to NAD+ as oxidising substrate were diminished, to zero for the latter. In addition for [G353D]xanthine dehydrogenase, there was an increase in apparent Km values both for NAD+ and NADH. These findings indicate involvement of this part of the sequence in the NAD+‐binding site. The G1011E mutation has a profound effect on the enzyme. As isolated and as present in crude extracts of the flies, this xanthine dehydrogenase variant lacks activity to xanthine or pterin as reducing substrate, indicating an impairment of the functioning of its molybdenum centre. However, it retains full activity to NADH with dyes as oxidising substrate. Mild oxidation of the enzyme converts it, apparently irreversibly, to a form showing full activity to xanthine and pterin. The nature of the group that is oxidised is discussed in the light of redox potential data. It is proposed that the process involves oxidation of the pterin of the molybdenum cofactor from the tetrahydro to a dihydro oxidation state. This conclusion is fully consistent with recent information [Romão, M. J., Archer, M., Moura, I., Moura, J. J. G., LeGall, J., Engh, R., Schneider, M., Hof, P. & Huber, R. (1995) Science 270, 1170–1176] from X‐ray crystallography on the structure of a closely related enzyme from Desulfovibrio gigas. It is proposed, that apparent irreversibility of the oxidative activating process for [G1011E]xanthine dehydrogenase, is due to conversion of its pterin to the tricyclic derivative detected by these workers. The data thus provide the strongest evidence available, that the oxidation state of the pterin can have a controlling influence on the activity of a molybdenum cofactor enzyme. Implications regarding pterin incorporation into xanthine dehydrogenase and in relation to other molybdenum enzymes are discussed.</description><subject>Amino Acid Sequence</subject><subject>Animals</subject><subject>Binding Sites</subject><subject>Coenzymes</subject><subject>Conserved Sequence</subject><subject>Cross Reactions</subject><subject>Desulfovibrio gigas</subject><subject>Drosophila melanogaster</subject><subject>Drosophila melanogaster - enzymology</subject><subject>Drosophila melanogaster - genetics</subject><subject>Enzyme Activation</subject><subject>Genetic Variation</subject><subject>Kinetics</subject><subject>Metalloproteins</subject><subject>Molecular Sequence Data</subject><subject>molybdenum‐center activation by oxidation</subject><subject>Mutagenesis, Site-Directed</subject><subject>Mutation</subject><subject>NAD - metabolism</subject><subject>NAD+/NADH‐binding site</subject><subject>Oxidation-Reduction</subject><subject>Pteridines</subject><subject>pterin molybdenum cofactor</subject><subject>rosy mutant strains of Drosophila melanogaster</subject><subject>Sequence Homology, Amino Acid</subject><subject>Structure-Activity Relationship</subject><subject>Xanthine</subject><subject>xanthine dehydrogenase</subject><subject>Xanthine Dehydrogenase - genetics</subject><subject>Xanthine Dehydrogenase - immunology</subject><subject>Xanthine Dehydrogenase - metabolism</subject><subject>Xanthines - metabolism</subject><issn>0014-2956</issn><issn>1432-1033</issn><fulltext>true</fulltext><rsrctype>article</rsrctype><creationdate>1996</creationdate><recordtype>article</recordtype><sourceid>EIF</sourceid><recordid>eNqNkctu1DAUhi0EKkPhEZC8glWC7ThxskGCXgCpFahlEDvrjHPSeJTEU9uBhnfhXUlmRl3jja3zX6yjjxDKWcrn826bcpmJhLMsS3lVFSlTpRjThydk9Sg8JSvGuExElRfPyYsQtoyxoirUCTkplZJKqBX5-827HfpoMVDX0J8wxNYOSM-xnWrv7nCAgPQHeDsrgTbe9fTGhYlej3Ge0NvowQ777Ll3we1a2wHtsYPB3UGI6CkMNY0tWk9vsMNfMBik0S0jisOfqce3YakZTRw97t3XaFoYbOhfkmcNdAFfHe9Tsr68-H72Obn6-unL2YerxEiVrxMoipplEkSFohCbhkswGeSyZMrkNa-UBMZkkQmoynxTNWDKPEesc9gUIA3PTsmbQ-_Ou_sRQ9S9DQa7eQt0Y9A8L4UUSs7G8mA087LBY6N33vbgJ82ZXsjorV4A6AWAXsjoPRn9MEdfH_8YNz3Wj8Ejill_f9B_2w6n_-7Vlxcfb-fnOvsHOBehRg</recordid><startdate>199608</startdate><enddate>199608</enddate><creator>Doyle, Wendy A.</creator><creator>Burke, Julian F.</creator><creator>Chovnick, Arthur</creator><creator>Dutton, F. Lee</creator><creator>Whittle, J. Robert S.</creator><creator>Bray, Robert C.</creator><general>Blackwell Science Ltd</general><scope>CGR</scope><scope>CUY</scope><scope>CVF</scope><scope>ECM</scope><scope>EIF</scope><scope>NPM</scope><scope>AAYXX</scope><scope>CITATION</scope><scope>7SS</scope><scope>8FD</scope><scope>FR3</scope><scope>P64</scope><scope>RC3</scope></search><sort><creationdate>199608</creationdate><title>Properties of Xanthine Dehydrogenase Variants from Rosy Mutant Strains of Drosophila melanogaster and their Relevance to the enzyme's Structure and Mechanism</title><author>Doyle, Wendy A. ; Burke, Julian F. ; Chovnick, Arthur ; Dutton, F. Lee ; Whittle, J. Robert S. ; Bray, Robert C.</author></sort><facets><frbrtype>5</frbrtype><frbrgroupid>cdi_FETCH-LOGICAL-c475U-a66d034a29e262bf14ac3a54807c5d1974a004632a985b9fac855eed5ab6a4c13</frbrgroupid><rsrctype>articles</rsrctype><prefilter>articles</prefilter><language>eng</language><creationdate>1996</creationdate><topic>Amino Acid Sequence</topic><topic>Animals</topic><topic>Binding Sites</topic><topic>Coenzymes</topic><topic>Conserved Sequence</topic><topic>Cross Reactions</topic><topic>Desulfovibrio gigas</topic><topic>Drosophila melanogaster</topic><topic>Drosophila melanogaster - enzymology</topic><topic>Drosophila melanogaster - genetics</topic><topic>Enzyme Activation</topic><topic>Genetic Variation</topic><topic>Kinetics</topic><topic>Metalloproteins</topic><topic>Molecular Sequence Data</topic><topic>molybdenum‐center activation by oxidation</topic><topic>Mutagenesis, Site-Directed</topic><topic>Mutation</topic><topic>NAD - metabolism</topic><topic>NAD+/NADH‐binding site</topic><topic>Oxidation-Reduction</topic><topic>Pteridines</topic><topic>pterin molybdenum cofactor</topic><topic>rosy mutant strains of Drosophila melanogaster</topic><topic>Sequence Homology, Amino Acid</topic><topic>Structure-Activity Relationship</topic><topic>Xanthine</topic><topic>xanthine dehydrogenase</topic><topic>Xanthine Dehydrogenase - genetics</topic><topic>Xanthine Dehydrogenase - immunology</topic><topic>Xanthine Dehydrogenase - metabolism</topic><topic>Xanthines - metabolism</topic><toplevel>peer_reviewed</toplevel><toplevel>online_resources</toplevel><creatorcontrib>Doyle, Wendy A.</creatorcontrib><creatorcontrib>Burke, Julian F.</creatorcontrib><creatorcontrib>Chovnick, Arthur</creatorcontrib><creatorcontrib>Dutton, F. Lee</creatorcontrib><creatorcontrib>Whittle, J. Robert S.</creatorcontrib><creatorcontrib>Bray, Robert C.</creatorcontrib><collection>Medline</collection><collection>MEDLINE</collection><collection>MEDLINE (Ovid)</collection><collection>MEDLINE</collection><collection>MEDLINE</collection><collection>PubMed</collection><collection>CrossRef</collection><collection>Entomology Abstracts (Full archive)</collection><collection>Technology Research Database</collection><collection>Engineering Research Database</collection><collection>Biotechnology and BioEngineering Abstracts</collection><collection>Genetics Abstracts</collection><jtitle>European journal of biochemistry</jtitle></facets><delivery><delcategory>Remote Search Resource</delcategory><fulltext>fulltext</fulltext></delivery><addata><au>Doyle, Wendy A.</au><au>Burke, Julian F.</au><au>Chovnick, Arthur</au><au>Dutton, F. Lee</au><au>Whittle, J. Robert S.</au><au>Bray, Robert C.</au><format>journal</format><genre>article</genre><ristype>JOUR</ristype><atitle>Properties of Xanthine Dehydrogenase Variants from Rosy Mutant Strains of Drosophila melanogaster and their Relevance to the enzyme's Structure and Mechanism</atitle><jtitle>European journal of biochemistry</jtitle><addtitle>Eur J Biochem</addtitle><date>1996-08</date><risdate>1996</risdate><volume>239</volume><issue>3</issue><spage>782</spage><epage>795</epage><pages>782-795</pages><issn>0014-2956</issn><eissn>1432-1033</eissn><abstract>Xanthine dehydrogenase, a molybdenum, iron‐sulfur flavoenzyme encoded in the fruit fly Drosophila melanogaster by the rosy gene, has been characterised both from the wild‐type and mutant flies. Enzyme assays, using a variety of different oxidising and reducing substrates were supplemented by limited molecular characterisation. Four rosy strains showed no detectable activity in any enzyme assay tried, whereas from four wild‐type and three rosy mutant strains, those for the [E89K], [L127F] and [L157P]xanthine dehydrogenases (in all of which the mutation is in the iron‐sulfur domain), the enzyme molecules, although present at different levels, had extremely similar or identical properties. This was confirmed by purification of one wild‐type and one mutant enzyme, [E89K]xanthine dehydrogenase. These both had ultraviolet–visible absorption spectra similar to milk xanthine oxidase. Both were found to be quite stable molecules, showing very high catalytic‐centre activities and with little tendency to become degraded by proteolysis or modified by conversion to oxidase or desulfo forms. In three further rosy strains, giving [G353D]xanthine dehydrogenase and [S357F]xanthine dehydrogenase mutated in the flavin domain, and [G1011E]xanthine dehydrogenase mutated in the molybdenum domain, enzyme activities were selectively diminished in certain assays. For the G353D and S357F mutant enzymes activities to NAD+ as oxidising substrate were diminished, to zero for the latter. In addition for [G353D]xanthine dehydrogenase, there was an increase in apparent Km values both for NAD+ and NADH. These findings indicate involvement of this part of the sequence in the NAD+‐binding site. The G1011E mutation has a profound effect on the enzyme. As isolated and as present in crude extracts of the flies, this xanthine dehydrogenase variant lacks activity to xanthine or pterin as reducing substrate, indicating an impairment of the functioning of its molybdenum centre. However, it retains full activity to NADH with dyes as oxidising substrate. Mild oxidation of the enzyme converts it, apparently irreversibly, to a form showing full activity to xanthine and pterin. The nature of the group that is oxidised is discussed in the light of redox potential data. It is proposed that the process involves oxidation of the pterin of the molybdenum cofactor from the tetrahydro to a dihydro oxidation state. This conclusion is fully consistent with recent information [Romão, M. J., Archer, M., Moura, I., Moura, J. J. G., LeGall, J., Engh, R., Schneider, M., Hof, P. & Huber, R. (1995) Science 270, 1170–1176] from X‐ray crystallography on the structure of a closely related enzyme from Desulfovibrio gigas. It is proposed, that apparent irreversibility of the oxidative activating process for [G1011E]xanthine dehydrogenase, is due to conversion of its pterin to the tricyclic derivative detected by these workers. The data thus provide the strongest evidence available, that the oxidation state of the pterin can have a controlling influence on the activity of a molybdenum cofactor enzyme. Implications regarding pterin incorporation into xanthine dehydrogenase and in relation to other molybdenum enzymes are discussed.</abstract><cop>Oxford, UK</cop><pub>Blackwell Science Ltd</pub><pmid>8774727</pmid><doi>10.1111/j.1432-1033.1996.0782u.x</doi><tpages>14</tpages><oa>free_for_read</oa></addata></record> |
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subjects | Amino Acid Sequence Animals Binding Sites Coenzymes Conserved Sequence Cross Reactions Desulfovibrio gigas Drosophila melanogaster Drosophila melanogaster - enzymology Drosophila melanogaster - genetics Enzyme Activation Genetic Variation Kinetics Metalloproteins Molecular Sequence Data molybdenum‐center activation by oxidation Mutagenesis, Site-Directed Mutation NAD - metabolism NAD+/NADH‐binding site Oxidation-Reduction Pteridines pterin molybdenum cofactor rosy mutant strains of Drosophila melanogaster Sequence Homology, Amino Acid Structure-Activity Relationship Xanthine xanthine dehydrogenase Xanthine Dehydrogenase - genetics Xanthine Dehydrogenase - immunology Xanthine Dehydrogenase - metabolism Xanthines - metabolism |
title | Properties of Xanthine Dehydrogenase Variants from Rosy Mutant Strains of Drosophila melanogaster and their Relevance to the enzyme's Structure and Mechanism |
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